RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 EOGTQ5NDL2 527 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 ADAM5Q6NVV9 412 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 TMIGD1Q6UXZ0 262 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 BHLHA15Q7RTS1 189 aaPredicted RBP3.29□□□□□ -1.88
VPS13D-207ENST00000476169 HORMAD1Q86X24 394 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 CRLF3Q8IUI8 442 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 NKAIN4Q8IVV8 208 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 ABHD12Q8N2K0 398 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 ZNF565Q8N9K5 539 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 WDR31Q8NA23 367 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 ZNF740Q8NDX6 193 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 OR2AP1Q8NGE2 309 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 OR9G1Q8NH87 305 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 FANK1Q8TC84 345 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 OR51E1Q8TCB6 317 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 AGAP11Q8TF27 550 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 APH1BQ8WW43 257 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 CHCHD10Q8WYQ3 142 aaPredicted RBP3.29□□□□□ -1.88
VPS13D-207ENST00000476169 TMEM54Q969K7 222 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 ZFP3Q96NJ6 502 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 HIST1H4GQ99525 98 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 MICU1Q9BPX6 476 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 TIMM29Q9BSF4 260 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 CALN1Q9BXU9 219 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 SRRQ9GZT4 340 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 ADNPQ9H2P0 1102 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 SAV1Q9H4B6 383 aaPredicted RBP3.29□□□□□ -1.88
VPS13D-207ENST00000476169 SLC38A10Q9HBR0 1119 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 SIRT7Q9NRC8 400 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 CALYQ9NYX4 217 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 DHRS4-AS1Q9P1J3 65 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 SCML1Q9UN30 329 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 TSSC4Q9Y5U2 329 aaPredicted RBP3.29□□□□□ -1.88
VPS13D-207ENST00000476169 CDC42BPAQ5VT25 1732 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 MYO5CQ9NQX4 1742 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 DNMT1P26358 1616 aaKnown RBP3.29□□□□□ -1.88
VPS13D-207ENST00000476169 CAMSAP1Q5T5Y3 1602 aa3.29□□□□□ -1.88
VPS13D-207ENST00000476169 ADAMTS13Q76LX8 1427 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 RIMS2Q9UQ26 1411 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 LRPPRCP42704 1394 aaKnown RBP3.28□□□□□ -1.88
VPS13D-207ENST00000476169 JCADQ9P266 1359 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 TRAV8-7A0A075B6U6 113 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 IGHV3OR16-13A0A075B7E8 117 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 A0A087WYN8 130 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 A0A0G2JRQ6 117 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 A0A1B0GVI7 797 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 K7EN84 100 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 NUPL2O15504 423 aaKnown RBP3.28□□□□□ -1.88
VPS13D-207ENST00000476169 GCGP01275 180 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 MELTFP08582 738 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 CCDC166P0CW27 439 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 PET100P0DJ07 73 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 CT45A6P0DMU7 189 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 CT45A5P0DMU8 189 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 CT45A7P0DMV0 189 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 IGLL1P15814 213 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 TCP1P17987 556 aaKnown RBP3.28□□□□□ -1.88
VPS13D-207ENST00000476169 CMA1P23946 247 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 PSMB6P28072 239 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 DNASE1L1P49184 302 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 STX17P56962 302 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 MLF1P58340 268 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 NUTF2P61970 127 aaKnown RBP3.28□□□□□ -1.88
VPS13D-207ENST00000476169 TGFBR3Q03167 851 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 HNRNPA0Q13151 305 aaKnown RBP3.28□□□□□ -1.88
VPS13D-207ENST00000476169 SLC39A6Q13433 755 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 DGCR6Q14129 220 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 CLINT1Q14677 625 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 TAL2Q16559 108 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 NRF1Q16656 503 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 CT45A1Q5HYN5 189 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 VAX1Q5SQQ9 334 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 FAHD1Q6P587 224 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 WDR74Q6RFH5 385 aaPredicted RBP3.28□□□□□ -1.88
VPS13D-207ENST00000476169 CD300LGQ6UXG3 332 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 PLEKHG7Q6ZR37 379 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 TMEM179Q6ZVK1 233 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 BOD1L2Q8IYS8 172 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 CDRT4Q8N9R6 151 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 OR10R2Q8NGX6 335 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 CT45A3Q8NHU0 189 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 ITLN1Q8WWA0 313 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 IFT81Q8WYA0 676 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 ARPC1AQ92747 370 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 FRAT1Q92837 279 aaPredicted RBP3.28□□□□□ -1.88
VPS13D-207ENST00000476169 FGGYQ96C11 551 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 PIK3IP1Q96FE7 263 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 TSG101Q99816 390 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 CIB1Q99828 191 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 NSRP1Q9H0G5 558 aaKnown RBP3.28□□□□□ -1.88
VPS13D-207ENST00000476169 OR51J1Q9H342 316 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 CEP170BQ9Y4F5 1589 aaPredicted RBP3.28□□□□□ -1.88
VPS13D-207ENST00000476169 FAM135AQ9P2D6 1515 aa3.28□□□□□ -1.88
VPS13D-207ENST00000476169 SCAF11Q99590 1463 aaKnown RBP3.28□□□□□ -1.88
VPS13D-207ENST00000476169 SYNMO15061 1565 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 FABP12A6NFH5 140 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 FAM220BPB1ANY3 271 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 C12orf77C9JDV5 145 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 F8VZ95 297 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 hCG_2039718K7EN88 272 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms