RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 SLITRK2Q9H156 845 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 POFUT1Q9H488 388 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 EMC7Q9NPA0 242 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 GRHPRQ9UBQ7 328 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 STARD10Q9Y365 291 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 MGAM2Q2M2H8 2515 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 BBIP1A8MTZ0 92 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 FAM220BPB1ANY3 271 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 H7C1C5 153 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 MRASO14807 208 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 EDF1O60869 148 aaKnown RBP9.09□□□□□ -0.95
CDRT1-205ENST00000475944 SCG5P05408 212 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 WNT2P09544 360 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 RAC2P15153 192 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 RPS2P15880 293 aaKnown RBP9.09□□□□□ -0.95
CDRT1-205ENST00000475944 CD80P33681 288 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 RPL4P36578 427 aaKnown RBP9.09□□□□□ -0.95
CDRT1-205ENST00000475944 RBMXP38159 391 aaKnown RBP9.09□□□□□ -0.95
CDRT1-205ENST00000475944 RGS6P49758 472 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 MMP16P51512 607 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 LCN6P62502 163 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 GNB2P62879 340 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 SELENOWP63302 87 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 PRKCDQ05655 676 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 TRAM2Q15035 370 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 SLC9A3R2Q15599 337 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 PDLIM3Q53GG5 364 aaPredicted RBP9.09□□□□□ -0.95
CDRT1-205ENST00000475944 TTMPQ5BVD1 217 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 C1orf94Q6P1W5 598 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 C9orf139Q6ZV77 190 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 RNF113BQ8IZP6 322 aaKnown RBP9.09□□□□□ -0.95
CDRT1-205ENST00000475944 OFCC1Q8IZS5 231 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 OR5AS1Q8N127 324 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 ATG16L2Q8NAA4 619 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 FAM156AQ8NDB6 213 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 OR2T12Q8NG77 320 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 OR5L1Q8NGL2 311 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 OR13C2Q8NGS9 318 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 UPRTQ96BW1 309 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 PLEKHA8Q96JA3 519 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 ZNF583Q96ND8 569 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 FNDC11Q9BVV2 318 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 GCM1Q9NP62 436 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 MIOXQ9UGB7 285 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 ATPIF1Q9UII2 106 aa9.09□□□□□ -0.95
CDRT1-205ENST00000475944 TRAV40A0A0B4J280 105 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 IGHV2-70DA0A0C4DH43 119 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 TEX13CA0A0J9YWL9 993 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 PRSS37A4D1T9 235 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 HMGB1P1B2RPK0 211 aaPredicted RBP9.08□□□□□ -0.96
CDRT1-205ENST00000475944 GPANK1O95872 356 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 PLATP00750 562 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 IFNW1P05000 195 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 CD14P08571 375 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 IGHV4-38-2P0DP08 117 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 SRP9P49458 86 aaKnown RBP9.08□□□□□ -0.96
CDRT1-205ENST00000475944 LSM6P62312 80 aaKnown RBP9.08□□□□□ -0.96
CDRT1-205ENST00000475944 DEFA6Q01524 100 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 PAX2Q02962 417 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 FHL1Q13642 323 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 MAPRE2Q15555 327 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 C16orf87Q6PH81 154 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 FBXW12Q6X9E4 464 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 ZNF730Q6ZMV8 503 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 SPATC1Q76KD6 591 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 NLRC3Q7RTR2 1065 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 KLBQ86Z14 1044 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 C1orf87Q8N0U7 546 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 PCYOX1LQ8NBM8 494 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 OR8G5Q8NG78 346 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 OR10AD1Q8NGE0 317 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 OR13G1Q8NGZ3 307 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 RAB40AQ8WXH6 277 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 ACOT11Q8WXI4 607 aaPredicted RBP9.08□□□□□ -0.96
CDRT1-205ENST00000475944 RASD2Q96D21 266 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 NEIL1Q96FI4 390 aaPredicted RBP9.08□□□□□ -0.96
CDRT1-205ENST00000475944 MEGF10Q96KG7 1140 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 ZNF570Q96NI8 536 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 GID8Q9NWU2 228 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 RHCGQ9UBD6 479 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 ASH2LQ9UBL3 628 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 ADAM18Q9Y3Q7 739 aa9.08□□□□□ -0.96
CDRT1-205ENST00000475944 IGHV3OR16-10A0A075B7F0 116 aa9.07□□□□□ -0.96
CDRT1-205ENST00000475944 A0A087WUU8 490 aa9.07□□□□□ -0.96
CDRT1-205ENST00000475944 A0A1B0GUS0 222 aa9.07□□□□□ -0.96
CDRT1-205ENST00000475944 ELOVL7A1L3X0 281 aa9.07□□□□□ -0.96
CDRT1-205ENST00000475944 OR6C6A6NF89 314 aa9.07□□□□□ -0.96
CDRT1-205ENST00000475944 LRRC30A6NM36 301 aa9.07□□□□□ -0.96
CDRT1-205ENST00000475944 FSTL3O95633 263 aa9.07□□□□□ -0.96
CDRT1-205ENST00000475944 CYB5R3P00387 301 aaPredicted RBP9.07□□□□□ -0.96
CDRT1-205ENST00000475944 CTLA4P16410 223 aa9.07□□□□□ -0.96
CDRT1-205ENST00000475944 MDKP21741 143 aaPredicted RBP9.07□□□□□ -0.96
CDRT1-205ENST00000475944 GPR4P46093 362 aa9.07□□□□□ -0.96
CDRT1-205ENST00000475944 YAP1P46937 504 aaKnown RBP9.07□□□□□ -0.96
CDRT1-205ENST00000475944 ERFP50548 548 aa9.07□□□□□ -0.96
CDRT1-205ENST00000475944 ZNF181Q2M3W8 571 aa9.07□□□□□ -0.96
CDRT1-205ENST00000475944 ZBED5Q49AG3 693 aa9.07□□□□□ -0.96
CDRT1-205ENST00000475944 MESTQ5EB52 335 aa9.07□□□□□ -0.96
CDRT1-205ENST00000475944 MBOAT2Q6ZWT7 520 aa9.07□□□□□ -0.96
CDRT1-205ENST00000475944 RRM2BQ7LG56 351 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms