RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 BIVMQ86UB2 503 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 UBE2J2Q8N2K1 259 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 KLHL36Q8N4N3 616 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 NANOGP1Q8N7R0 232 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 C1orf162Q8NEQ5 155 aaPredicted RBP13.64□□□□□ -0.23
CPSF3-203ENST00000475482 OR10H4Q8NGA5 316 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 OR4F15Q8NGB8 312 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 TMEM171Q8WVE6 324 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 NEUROG1Q92886 237 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 ZMYND19Q96E35 227 aaPredicted RBP13.64□□□□□ -0.23
CPSF3-203ENST00000475482 PERPQ96FX8 193 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 TXNDC15Q96J42 360 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 ZNF385AQ96PM9 386 aaKnown RBP13.64□□□□□ -0.23
CPSF3-203ENST00000475482 NUAK2Q9H093 628 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 ADGRL4Q9HBW9 690 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 B9D1Q9UPM9 204 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 RCE1Q9Y256 329 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 TMEM14AQ9Y6G1 99 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 C12orf71A8MTZ7 269 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 H7C1C5 153 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 PHYHO14832 338 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 KHDRBS3O75525 346 aaKnown RBP13.63□□□□□ -0.23
CPSF3-203ENST00000475482 RAD51DO75771 328 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 SEC14L2O76054 403 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 SOD3P08294 240 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 INHBBP09529 407 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 PYCR1P32322 319 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 WNT4P56705 351 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 CLDN17P56750 224 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 LCN6P62502 163 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 ACTA2P62736 377 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 ACTG2P63267 376 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 SPHARQ15513 63 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 MED22Q15528 200 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 NHLRC1Q6VVB1 395 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 SLC16A9Q7RTY1 509 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 EGFL6Q8IUX8 553 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 OR6V1Q8N148 313 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 C17orf78Q8N4C9 275 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 WDR31Q8NA23 367 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 NOXO1Q8NFA2 376 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 KBTBD8Q8NFY9 601 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 OR13F1Q8NGS4 319 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 OR52N1Q8NH53 320 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 FBXW5Q969U6 566 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 DGCR14Q96DF8 476 aaKnown RBP13.63□□□□□ -0.23
CPSF3-203ENST00000475482 COX4I2Q96KJ9 171 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 MRPL13Q9BYD1 178 aaKnown RBP13.63□□□□□ -0.23
CPSF3-203ENST00000475482 YIPF3Q9GZM5 350 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 CXorf56Q9H5V9 222 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 RERGLQ9H628 205 aa13.63□□□□□ -0.23
CPSF3-203ENST00000475482 CAB39Q9Y376 341 aaPredicted RBP13.63□□□□□ -0.23
CPSF3-203ENST00000475482 FN1P02751 2386 aaKnown RBP13.63□□□□□ -0.23
CPSF3-203ENST00000475482 CIB4A0PJX0 185 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 CCDC160A6NGH7 325 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 ZNF670-ZNF695F2Z2N8 137 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 J3QRE1 110 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 APOL3O95236 402 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 HLA-DQA2P01906 255 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 PGA4P0DJD7 388 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 PGA3P0DJD8 388 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 PTAFRP25105 342 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 MPGP29372 298 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 ETV1P50549 477 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 GALEQ14376 348 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 TIGD6Q17RP2 521 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 KRTAP21-3Q3LHN1 58 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 SLC35F2Q8IXU6 374 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 SYT14Q8NB59 555 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 OR51L1Q8NGJ5 315 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 ZNF420Q8TAQ5 688 aaPredicted RBP13.62□□□□□ -0.23
CPSF3-203ENST00000475482 SMAP2Q8WU79 429 aaPredicted RBP13.62□□□□□ -0.23
CPSF3-203ENST00000475482 RADILQ96JH8 1075 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 COG8Q96MW5 612 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 INTS14Q96SY0 518 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 EMC6Q9BV81 110 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 SLCO5A1Q9H2Y9 848 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 ISYNA1Q9NPH2 558 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 B3GAT2Q9NPZ5 323 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 ERVK13-1Q9NX77 482 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 LAMP3Q9UQV4 416 aa13.62□□□□□ -0.23
CPSF3-203ENST00000475482 OR6C65A6NJZ3 312 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 SLC43A1O75387 559 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 ZNF432O94892 652 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 INMTO95050 263 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 PTHP01270 115 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 CD8AP01732 235 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 LCKP06239 509 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 MRPL3P09001 348 aaKnown RBP13.61□□□□□ -0.23
CPSF3-203ENST00000475482 HOXB4P17483 251 aaPredicted RBP13.61□□□□□ -0.23
CPSF3-203ENST00000475482 GUCA1AP43080 201 aaPredicted RBP13.61□□□□□ -0.23
CPSF3-203ENST00000475482 CSNK1A1P48729 337 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 RUNX1T1Q06455 604 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 CAMK2DQ13557 499 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 LINC01590Q5TEZ4 76 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 B3GLCTQ6Y288 498 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 SHFQ7M4L6 423 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 AAED1Q7RTV5 226 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 LHFPL3Q86UP9 236 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 DTX2Q86UW9 622 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms