RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 ZBTB46Q86UZ6 589 aa20.54■□□□□ 0.88
CPNE1-223ENST00000475146 CYB561A3Q8NBI2 242 aa20.54■□□□□ 0.88
CPNE1-223ENST00000475146 NPEPL1Q8NDH3 523 aa20.54■□□□□ 0.88
CPNE1-223ENST00000475146 OR1F12Q8NHA8 337 aa20.54■□□□□ 0.88
CPNE1-223ENST00000475146 SLC7A6Q92536 515 aa20.54■□□□□ 0.88
CPNE1-223ENST00000475146 ARMC1Q9NVT9 282 aa20.54■□□□□ 0.88
CPNE1-223ENST00000475146 GRIP1Q9Y3R0 1128 aa20.54■□□□□ 0.88
CPNE1-223ENST00000475146 LHFPL6Q9Y693 200 aa20.54■□□□□ 0.88
CPNE1-223ENST00000475146 CHD3Q12873 2000 aaKnown RBP20.54■□□□□ 0.88
CPNE1-223ENST00000475146 GSC2O15499 205 aa20.53■□□□□ 0.88
CPNE1-223ENST00000475146 E2F6O75461 281 aa20.53■□□□□ 0.88
CPNE1-223ENST00000475146 NCR1O76036 304 aa20.53■□□□□ 0.88
CPNE1-223ENST00000475146 GIFP27352 417 aa20.53■□□□□ 0.88
CPNE1-223ENST00000475146 MAGEB1P43366 347 aa20.53■□□□□ 0.88
CPNE1-223ENST00000475146 TEKQ02763 1124 aa20.53■□□□□ 0.88
CPNE1-223ENST00000475146 SLC36A3Q495N2 470 aa20.53■□□□□ 0.88
CPNE1-223ENST00000475146 ELFN2Q5R3F8 820 aa20.53■□□□□ 0.88
CPNE1-223ENST00000475146 MBNL2Q5VZF2 373 aaKnown RBP20.53■□□□□ 0.88
CPNE1-223ENST00000475146 CORO6Q6QEF8 472 aa20.53■□□□□ 0.88
CPNE1-223ENST00000475146 GJC3Q8NFK1 279 aa20.53■□□□□ 0.88
CPNE1-223ENST00000475146 GTF3AQ92664 365 aaKnown RBP20.53■□□□□ 0.88
CPNE1-223ENST00000475146 NIPSNAP1Q9BPW8 284 aa20.53■□□□□ 0.88
CPNE1-223ENST00000475146 CADM1Q9BY67 442 aaKnown RBP20.53■□□□□ 0.88
CPNE1-223ENST00000475146 YY1AP1Q9H869 796 aa20.53■□□□□ 0.88
CPNE1-223ENST00000475146 BAIAP2Q9UQB8 552 aa20.53■□□□□ 0.88
CPNE1-223ENST00000475146 OR6C6A6NF89 314 aa20.52■□□□□ 0.88
CPNE1-223ENST00000475146 H3BSA7 217 aa20.52■□□□□ 0.88
CPNE1-223ENST00000475146 TFP02787 698 aa20.52■□□□□ 0.88
CPNE1-223ENST00000475146 PYCR1P32322 319 aa20.52■□□□□ 0.88
CPNE1-223ENST00000475146 CBX1P83916 185 aa20.52■□□□□ 0.88
CPNE1-223ENST00000475146 PCGF3Q3KNV8 242 aa20.52■□□□□ 0.88
CPNE1-223ENST00000475146 LINC00346Q8IVM7 164 aa20.52■□□□□ 0.88
CPNE1-223ENST00000475146 LNX2Q8N448 690 aa20.52■□□□□ 0.88
CPNE1-223ENST00000475146 PROKR2Q8NFJ6 384 aa20.52■□□□□ 0.88
CPNE1-223ENST00000475146 OR2T33Q8NG76 320 aa20.52■□□□□ 0.88
CPNE1-223ENST00000475146 OR4Q3Q8NH05 313 aa20.52■□□□□ 0.88
CPNE1-223ENST00000475146 RDH5Q92781 318 aa20.52■□□□□ 0.88
CPNE1-223ENST00000475146 FEVQ99581 238 aa20.52■□□□□ 0.88
CPNE1-223ENST00000475146 CDADC1Q9BWV3 514 aa20.52■□□□□ 0.88
CPNE1-223ENST00000475146 HDHD2Q9H0R4 259 aa20.52■□□□□ 0.88
CPNE1-223ENST00000475146 TBCCD1Q9NVR7 557 aa20.52■□□□□ 0.88
CPNE1-223ENST00000475146 PDP1Q9P0J1 537 aaPredicted RBP20.52■□□□□ 0.88
CPNE1-223ENST00000475146 ZANQ9Y493 2812 aa20.52■□□□□ 0.88
CPNE1-223ENST00000475146 TCRBV3S1A0A5B6 114 aa20.51■□□□□ 0.87
CPNE1-223ENST00000475146 PLSCR5A0PG75 271 aa20.51■□□□□ 0.87
CPNE1-223ENST00000475146 ARRDC5A6NEK1 342 aa20.51■□□□□ 0.87
CPNE1-223ENST00000475146 TPD52L2O43399 206 aaKnown RBP20.51■□□□□ 0.87
CPNE1-223ENST00000475146 FKBP6O75344 327 aa20.51■□□□□ 0.87
CPNE1-223ENST00000475146 IGHV4-31P0DP07 118 aa20.51■□□□□ 0.87
CPNE1-223ENST00000475146 RASSF2P50749 326 aa20.51■□□□□ 0.87
CPNE1-223ENST00000475146 ZNF81P51508 661 aa20.51■□□□□ 0.87
CPNE1-223ENST00000475146 CCL8P80075 99 aa20.51■□□□□ 0.87
CPNE1-223ENST00000475146 COX10Q12887 443 aa20.51■□□□□ 0.87
CPNE1-223ENST00000475146 C6orf52Q5T4I8 152 aa20.51■□□□□ 0.87
CPNE1-223ENST00000475146 SLC37A3Q8NCC5 494 aa20.51■□□□□ 0.87
CPNE1-223ENST00000475146 OR2AJ1Q8NGZ0 328 aa20.51■□□□□ 0.87
CPNE1-223ENST00000475146 OR2T4Q8NH00 348 aa20.51■□□□□ 0.87
CPNE1-223ENST00000475146 TEX47Q8TBZ9 253 aa20.51■□□□□ 0.87
CPNE1-223ENST00000475146 CHODLQ9H9P2 273 aa20.51■□□□□ 0.87
CPNE1-223ENST00000475146 ATPIF1Q9UII2 106 aa20.51■□□□□ 0.87
CPNE1-223ENST00000475146 KLHL21Q9UJP4 597 aa20.51■□□□□ 0.87
CPNE1-223ENST00000475146 NSD1Q96L73 2696 aaPredicted RBP20.51■□□□□ 0.87
CPNE1-223ENST00000475146 ZFHX3Q15911 3703 aa20.51■□□□□ 0.87
CPNE1-223ENST00000475146 H3BN98 237 aa20.5■□□□□ 0.87
CPNE1-223ENST00000475146 DBHP09172 617 aa20.5■□□□□ 0.87
CPNE1-223ENST00000475146 ZNF16P17020 682 aaPredicted RBP20.5■□□□□ 0.87
CPNE1-223ENST00000475146 ZNF23P17027 643 aa20.5■□□□□ 0.87
CPNE1-223ENST00000475146 COL8A2P25067 703 aa20.5■□□□□ 0.87
CPNE1-223ENST00000475146 GZMKP49863 264 aa20.5■□□□□ 0.87
CPNE1-223ENST00000475146 RIN1Q13671 783 aa20.5■□□□□ 0.87
CPNE1-223ENST00000475146 TSTQ16762 297 aaKnown RBP20.5■□□□□ 0.87
CPNE1-223ENST00000475146 TMEM255AQ5JRV8 349 aa20.5■□□□□ 0.87
CPNE1-223ENST00000475146 CYB5R2Q6BCY4 276 aa20.5■□□□□ 0.87
CPNE1-223ENST00000475146 SLC18B1Q6NT16 456 aa20.5■□□□□ 0.87
CPNE1-223ENST00000475146 TMEM179BQ7Z7N9 219 aa20.5■□□□□ 0.87
CPNE1-223ENST00000475146 OR9Q1Q8NGQ5 310 aa20.5■□□□□ 0.87
CPNE1-223ENST00000475146 DDOQ99489 341 aa20.5■□□□□ 0.87
CPNE1-223ENST00000475146 COQ7Q99807 217 aa20.5■□□□□ 0.87
CPNE1-223ENST00000475146 POFUT1Q9H488 388 aa20.5■□□□□ 0.87
CPNE1-223ENST00000475146 NF1P21359 2839 aa20.49■□□□□ 0.87
CPNE1-223ENST00000475146 LRP5LA4QPB2 252 aa20.49■□□□□ 0.87
CPNE1-223ENST00000475146 A8MV72 311 aaPredicted RBP20.49■□□□□ 0.87
CPNE1-223ENST00000475146 SPRY3O43610 288 aa20.49■□□□□ 0.87
CPNE1-223ENST00000475146 TIMM8AO60220 97 aaPredicted RBP20.49■□□□□ 0.87
CPNE1-223ENST00000475146 ATP5HO75947 161 aa20.49■□□□□ 0.87
CPNE1-223ENST00000475146 IFNGP01579 166 aa20.49■□□□□ 0.87
CPNE1-223ENST00000475146 ZNF823P16415 610 aa20.49■□□□□ 0.87
CPNE1-223ENST00000475146 ACHEP22303 614 aa20.49■□□□□ 0.87
CPNE1-223ENST00000475146 CHN2P52757 468 aa20.49■□□□□ 0.87
CPNE1-223ENST00000475146 HIST1H3AP68431 136 aa20.49■□□□□ 0.87
CPNE1-223ENST00000475146 CRMP1Q14194 572 aa20.49■□□□□ 0.87
CPNE1-223ENST00000475146 HIST2H3PS2Q5TEC6 136 aa20.49■□□□□ 0.87
CPNE1-223ENST00000475146 CD300LDQ6UXZ3 194 aa20.49■□□□□ 0.87
CPNE1-223ENST00000475146 CFAP77Q6ZQR2 320 aa20.49■□□□□ 0.87
CPNE1-223ENST00000475146 HIST2H3AQ71DI3 136 aa20.49■□□□□ 0.87
CPNE1-223ENST00000475146 OR51L1Q8NGJ5 315 aa20.49■□□□□ 0.87
CPNE1-223ENST00000475146 YIPF5Q969M3 257 aa20.49■□□□□ 0.87
CPNE1-223ENST00000475146 COG8Q96MW5 612 aa20.49■□□□□ 0.87
CPNE1-223ENST00000475146 DCLRE1CQ96SD1 692 aaKnown RBP20.49■□□□□ 0.87
CPNE1-223ENST00000475146 PITX2Q99697 317 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms