RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 CD300LDQ6UXZ3 194 aa12.98□□□□□ -0.33
VARS-223ENST00000474643 OR4K13Q8NH42 304 aa12.98□□□□□ -0.33
VARS-223ENST00000474643 SYNPRQ8TBG9 265 aa12.98□□□□□ -0.33
VARS-223ENST00000474643 NMD3Q96D46 503 aaKnown RBP12.98□□□□□ -0.33
VARS-223ENST00000474643 FEVQ99581 238 aa12.98□□□□□ -0.33
VARS-223ENST00000474643 TSSK6Q9BXA6 273 aa12.98□□□□□ -0.33
VARS-223ENST00000474643 DGCR6LQ9BY27 220 aa12.98□□□□□ -0.33
VARS-223ENST00000474643 BCL2L14Q9BZR8 327 aa12.98□□□□□ -0.33
VARS-223ENST00000474643 SLCO1C1Q9NYB5 712 aa12.98□□□□□ -0.33
VARS-223ENST00000474643 ZNF224Q9NZL3 707 aa12.98□□□□□ -0.33
VARS-223ENST00000474643 KIF17Q9P2E2 1029 aa12.98□□□□□ -0.33
VARS-223ENST00000474643 EIF3KQ9UBQ5 218 aaKnown RBP12.98□□□□□ -0.33
VARS-223ENST00000474643 POLR1DQ9Y2S0 133 aa12.98□□□□□ -0.33
VARS-223ENST00000474643 RRP15Q9Y3B9 282 aaKnown RBP12.98□□□□□ -0.33
VARS-223ENST00000474643 UGT2A1Q9Y4X1 527 aa12.98□□□□□ -0.33
VARS-223ENST00000474643 C12orf71A8MTZ7 269 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 H3BN98 237 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 ARPC3O15145 178 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 TACSTD2P09758 323 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 HIST1H1CP16403 213 aaKnown RBP12.97□□□□□ -0.33
VARS-223ENST00000474643 CTLA4P16410 223 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 ACHEP22303 614 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 LAP3P28838 519 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 CDKN2AP42771 156 aaKnown RBP12.97□□□□□ -0.33
VARS-223ENST00000474643 CDH15P55291 814 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 PCBD1P61457 104 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 COX10Q12887 443 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 TRIP10Q15642 601 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 PTCHD4Q6ZW05 846 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.97□□□□□ -0.33
VARS-223ENST00000474643 GLCCI1Q86VQ1 547 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 LRP11Q86VZ4 500 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 ZDHHC13Q8IUH4 622 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 ZNF584Q8IVC4 421 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 ATG16L2Q8NAA4 619 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 SDR9C7Q8NEX9 313 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 OR52E2Q8NGJ4 325 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 OR5K1Q8NHB7 308 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 TEX47Q8TBZ9 253 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 LRTOMTQ8WZ04 291 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 NMNAT3Q96T66 252 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 NIPSNAP1Q9BPW8 284 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 ZNF416Q9BWM5 594 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 NUAK2Q9H093 628 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 SRA1Q9HD15 236 aaKnown RBP12.97□□□□□ -0.33
VARS-223ENST00000474643 DECR2Q9NUI1 292 aa12.97□□□□□ -0.33
VARS-223ENST00000474643 VSX1Q9NZR4 365 aaPredicted RBP12.97□□□□□ -0.33
VARS-223ENST00000474643 TMEFF2Q9UIK5 374 aaPredicted RBP12.97□□□□□ -0.33
VARS-223ENST00000474643 COA3Q9Y2R0 106 aaPredicted RBP12.97□□□□□ -0.33
VARS-223ENST00000474643 B4DSR2 109 aa12.96□□□□□ -0.33
VARS-223ENST00000474643 LILRA1O75019 489 aa12.96□□□□□ -0.33
VARS-223ENST00000474643 CST2P09228 141 aa12.96□□□□□ -0.33
VARS-223ENST00000474643 ANXA8P13928 327 aa12.96□□□□□ -0.33
VARS-223ENST00000474643 ZNF32P17041 273 aa12.96□□□□□ -0.33
VARS-223ENST00000474643 POU1F1P28069 291 aa12.96□□□□□ -0.33
VARS-223ENST00000474643 GCH1P30793 250 aa12.96□□□□□ -0.33
VARS-223ENST00000474643 TEKQ02763 1124 aa12.96□□□□□ -0.33
VARS-223ENST00000474643 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.96□□□□□ -0.33
VARS-223ENST00000474643 RIN1Q13671 783 aa12.96□□□□□ -0.33
VARS-223ENST00000474643 PCGF3Q3KNV8 242 aa12.96□□□□□ -0.33
VARS-223ENST00000474643 PABPC1L2AQ5JQF8 200 aa12.96□□□□□ -0.33
VARS-223ENST00000474643 FAM27BQ5VT28 67 aa12.96□□□□□ -0.33
VARS-223ENST00000474643 TMEM179BQ7Z7N9 219 aa12.96□□□□□ -0.33
VARS-223ENST00000474643 GLB1L2Q8IW92 636 aa12.96□□□□□ -0.33
VARS-223ENST00000474643 ALDH16A1Q8IZ83 802 aa12.96□□□□□ -0.33
VARS-223ENST00000474643 OR2T33Q8NG76 320 aa12.96□□□□□ -0.33
VARS-223ENST00000474643 NABP1Q96AH0 204 aa12.96□□□□□ -0.33
VARS-223ENST00000474643 PKP2Q99959 881 aa12.96□□□□□ -0.33
VARS-223ENST00000474643 PLA2G12AQ9BZM1 189 aa12.96□□□□□ -0.33
VARS-223ENST00000474643 GABARAPL1Q9H0R8 117 aa12.96□□□□□ -0.33
VARS-223ENST00000474643 RASSF4Q9H2L5 321 aa12.96□□□□□ -0.33
VARS-223ENST00000474643 LPAR2Q9HBW0 351 aa12.96□□□□□ -0.33
VARS-223ENST00000474643 EMC7Q9NPA0 242 aa12.96□□□□□ -0.33
VARS-223ENST00000474643 HINT3Q9NQE9 182 aaKnown RBP12.96□□□□□ -0.33
VARS-223ENST00000474643 RPRD1BQ9NQG5 326 aaKnown RBP12.96□□□□□ -0.33
VARS-223ENST00000474643 POLE4Q9NR33 117 aa12.96□□□□□ -0.33
VARS-223ENST00000474643 IL20Q9NYY1 176 aa12.96□□□□□ -0.33
VARS-223ENST00000474643 MYEF2Q9P2K5 600 aaKnown RBP12.96□□□□□ -0.33
VARS-223ENST00000474643 STAB1Q9NY15 2570 aa12.96□□□□□ -0.34
VARS-223ENST00000474643 PLSCR5A0PG75 271 aa12.95□□□□□ -0.34
VARS-223ENST00000474643 G3V2T6 193 aa12.95□□□□□ -0.34
VARS-223ENST00000474643 HAX1O00165 279 aa12.95□□□□□ -0.34
VARS-223ENST00000474643 SNAP29O95721 258 aa12.95□□□□□ -0.34
VARS-223ENST00000474643 HLA-DQA2P01906 255 aa12.95□□□□□ -0.34
VARS-223ENST00000474643 HPXP02790 462 aa12.95□□□□□ -0.34
VARS-223ENST00000474643 IGFBP1P08833 259 aaPredicted RBP12.95□□□□□ -0.34
VARS-223ENST00000474643 ANPEPP15144 967 aa12.95□□□□□ -0.34
VARS-223ENST00000474643 PRKACGP22612 351 aa12.95□□□□□ -0.34
VARS-223ENST00000474643 IL2RGP31785 369 aa12.95□□□□□ -0.34
VARS-223ENST00000474643 GDI2P50395 445 aaKnown RBP12.95□□□□□ -0.34
VARS-223ENST00000474643 UCP2P55851 309 aa12.95□□□□□ -0.34
VARS-223ENST00000474643 GLO1Q04760 184 aa12.95□□□□□ -0.34
VARS-223ENST00000474643 SCGB2A2Q13296 93 aa12.95□□□□□ -0.34
VARS-223ENST00000474643 RCN1Q15293 331 aa12.95□□□□□ -0.34
VARS-223ENST00000474643 ELFN2Q5R3F8 820 aa12.95□□□□□ -0.34
VARS-223ENST00000474643 HS3ST5Q8IZT8 346 aa12.95□□□□□ -0.34
VARS-223ENST00000474643 OR8D4Q8NGM9 314 aa12.95□□□□□ -0.34
VARS-223ENST00000474643 OR1J1Q8NGS3 322 aa12.95□□□□□ -0.34
VARS-223ENST00000474643 AKR7LQ8NHP1 331 aa12.95□□□□□ -0.34
VARS-223ENST00000474643 ZNF75AQ96N20 296 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms