RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 STARD4Q96DR4 205 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 TMED9Q9BVK6 235 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 ISG20L2Q9H9L3 353 aaKnown RBP9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 SLCO1C1Q9NYB5 712 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 RSL24D1Q9UHA3 163 aaKnown RBP9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 SLC5A6Q9Y289 635 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 GSTK1Q9Y2Q3 226 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 KLHDC2Q9Y2U9 406 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 AMDHD2Q9Y303 409 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 MEMO1Q9Y316 297 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 LSM2Q9Y333 95 aaKnown RBP9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 LHFPL6Q9Y693 200 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 ZGRF1Q86YA3 2104 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 LOC100506127A0A0U1RQW1 187 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 TMEM269A0A1B0GVZ9 245 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 DPPA5A6NC42 116 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 TMEM212A6NML5 194 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 RER1O15258 196 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 AIREO43918 545 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 GPRIN2O60269 458 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 HLA-DPB1P04440 258 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 HOXB1P14653 301 aaPredicted RBP9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 CPEP16870 476 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 ZNF32P17041 273 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 IGHV1-2P23083 117 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 PAX7P23759 505 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 MAPK3P27361 379 aaPredicted RBP9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 GABRA5P31644 462 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 PSMB10P40306 273 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 TGM4P49221 684 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 CX3CR1P49238 355 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 GDI2P50395 445 aaKnown RBP9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 GPR50Q13585 617 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 CDK5R1Q15078 307 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 TBRG1Q3YBR2 411 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 LIPNQ5VXI9 398 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 CFAP77Q6ZQR2 320 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 SEM1Q6ZVN7 128 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 LINGO2Q7L985 606 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 CXorf67Q86X51 503 aaPredicted RBP9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 RPRMLQ8N4K4 120 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 MS4A15Q8N5U1 240 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 ZFP41Q8N8Y5 198 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 GALNT11Q8NCW6 608 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 STEAP2Q8NFT2 490 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 OR5AK2Q8NH90 309 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 ZNF420Q8TAQ5 688 aaPredicted RBP9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 PRR7Q8TB68 274 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 ST7LQ8TDW4 575 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 TSEN15Q8WW01 171 aaKnown RBP9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 MUCL1Q96DR8 90 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 SMIM19Q96E16 107 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 ZNF837Q96EG3 531 aaPredicted RBP9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 PELI1Q96FA3 418 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 PGAM5Q96HS1 289 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 OPALINQ96PE5 141 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 KCNJ15Q99712 375 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 COQ7Q99807 217 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 KCNS3Q9BQ31 491 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 USB1Q9BQ65 265 aaKnown RBP9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 FUNDC2Q9BWH2 189 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 OR2H1Q9GZK4 316 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 OBP2BQ9NPH6 170 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 BRD7Q9NPI1 651 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 NDUFB11Q9NX14 153 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 ELOVL5Q9NYP7 299 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 MRM2Q9UI43 246 aaKnown RBP9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 N6AMT1Q9Y5N5 214 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 R4GMQ9 66 aa9.01□□□□□ -0.97
PRPF38A-202ENST00000474048 ZFHX4Q86UP3 3567 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 A0A0G2JNJ9 132 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 F5H5K5 113 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 M0R135 149 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 MAGEB4O15481 346 aaPredicted RBP9□□□□□ -0.97
PRPF38A-202ENST00000474048 TBX1O43435 398 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 RGS9O75916 674 aaPredicted RBP9□□□□□ -0.97
PRPF38A-202ENST00000474048 TOXO94900 526 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 ITGA5P08648 1049 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 UBCP0CG48 685 aaKnown RBP9□□□□□ -0.97
PRPF38A-202ENST00000474048 CD53P19397 219 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 COX5AP20674 150 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 CCNOP22674 350 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 CHRNB4P30926 498 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 DCTDP32321 178 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 CD79BP40259 229 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 OPRL1P41146 370 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 PRKXP51817 358 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 TMBIM6P55061 237 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 PSMA6P60900 246 aaKnown RBP9□□□□□ -0.97
PRPF38A-202ENST00000474048 RAB1AP62820 205 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 ALKBH1Q13686 389 aaKnown RBP9□□□□□ -0.97
PRPF38A-202ENST00000474048 TBC1D28Q2M2D7 210 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 SLC25A35Q3KQZ1 300 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 HIKESHIQ53FT3 197 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 PABPC1L2AQ5JQF8 200 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 ZNF774Q6NX45 483 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 PCSK4Q6UW60 755 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 PAMR1Q6UXH9 720 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 UNQ6126/PRO20091Q6UXV3 157 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 ZNF704Q6ZNC4 412 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms