RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 FMO3P31513 532 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 VDAC2P45880 294 aaPredicted RBP3.13□□□□□ -1.91
BRCA1-212ENST00000473961 HSPA13P48723 471 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 MRPL19P49406 292 aaKnown RBP3.13□□□□□ -1.91
BRCA1-212ENST00000473961 B2MP61769 119 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 ADARB1P78563 741 aaKnown RBP3.13□□□□□ -1.91
BRCA1-212ENST00000473961 IGLV3-21P80748 117 aaPredicted RBP3.13□□□□□ -1.91
BRCA1-212ENST00000473961 MOGQ16653 247 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 DNAL1Q4LDG9 190 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 BEX5Q5H9J7 111 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 GPR157Q5UAW9 335 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 CTRB2Q6GPI1 263 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 C22orf42Q6IC83 251 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 NIPA1Q7RTP0 329 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 FBXO16Q8IX29 292 aaPredicted RBP3.13□□□□□ -1.91
BRCA1-212ENST00000473961 KATNAL2Q8IYT4 538 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 SYCE1Q8N0S2 351 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 PDIK1LQ8N165 341 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 ZNF557Q8N988 423 aaPredicted RBP3.13□□□□□ -1.91
BRCA1-212ENST00000473961 OR1N2Q8NGR9 330 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 OR9G1Q8NH87 305 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 DTX3LQ8TDB6 740 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 FAM172AQ8WUF8 416 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 C10orf82Q8WW14 230 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 ZNF75CPQ92670 426 aaPredicted RBP3.13□□□□□ -1.91
BRCA1-212ENST00000473961 PEX13Q92968 403 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 SGK3Q96BR1 496 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 PANX1Q96RD7 426 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 ATP5SQ99766 215 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 DHRS9Q9BPW9 319 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 UQCC2Q9BRT2 126 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 SHCBP1LQ9BZQ2 653 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 DNTTIP1Q9H147 329 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 BOLA2Q9H3K6 86 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 FANCEQ9HB96 536 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 GPATCH2LQ9NWQ4 482 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 TMEM9Q9P0T7 183 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 SHPKQ9UHJ6 478 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 VANGL2Q9ULK5 521 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 RAB26Q9ULW5 256 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 NOSIPQ9Y314 301 aaKnown RBP3.13□□□□□ -1.91
BRCA1-212ENST00000473961 SLC25A15Q9Y619 301 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 CDH10Q9Y6N8 788 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 MAP2P11137 1827 aaKnown RBP3.13□□□□□ -1.91
BRCA1-212ENST00000473961 ARHGAP23Q9P227 1491 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 MYO5AQ9Y4I1 1855 aaKnown RBP3.13□□□□□ -1.91
BRCA1-212ENST00000473961 GAKO14976 1311 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 ABCB11O95342 1321 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 NFAT5O94916 1531 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 ZFYVE16Q7Z3T8 1539 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 ARHGEF28Q8N1W1 1705 aaKnown RBP3.13□□□□□ -1.91
BRCA1-212ENST00000473961 ABCA8O94911 1581 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 MED1Q15648 1581 aaPredicted RBP3.12□□□□□ -1.91
BRCA1-212ENST00000473961 IGKV3D-20A0A0C4DH25 116 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 H3BSA7 217 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 H7C0C1 242 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 HUS1O60921 280 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 EIF3GO75821 320 aaKnown RBP eCLIP3.12□□□□□ -1.91
BRCA1-212ENST00000473961 GAS8-AS1O95177 125 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 POLR2MP0CAP2 368 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 CCNE1P24864 410 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 NUDT1P36639 197 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 NSG1P42857 185 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 GPR6P46095 362 aaPredicted RBP3.12□□□□□ -1.91
BRCA1-212ENST00000473961 UQCRFS1P47985 274 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 SUB1P53999 127 aaKnown RBP eCLIP3.12□□□□□ -1.91
BRCA1-212ENST00000473961 GNG2P59768 71 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 GPX6P59796 221 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 DSTNP60981 165 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 ESRRGP62508 458 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 TGFBR3Q03167 851 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 ECH1Q13011 328 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 APOFQ13790 326 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 SF3A2Q15428 464 aaKnown RBP3.12□□□□□ -1.91
BRCA1-212ENST00000473961 XKR4Q5GH76 650 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 CCNJQ5T5M9 372 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 REEP3Q6NUK4 255 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 ZNF774Q6NX45 483 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 CLEC2AQ6UVW9 174 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 IDO2Q6ZQW0 420 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 Q6ZR54 194 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 RNF165Q6ZSG1 346 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 H2AFVQ71UI9 128 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 PRSS41Q7RTY9 318 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 ARPINQ7Z6K5 226 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 OFCC1Q8IZS5 231 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 MS4A15Q8N5U1 240 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 TRIML2Q8N7C3 387 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 LINC00469Q8N7U9 141 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 ZNF740Q8NDX6 193 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 VN1R2Q8NFZ6 395 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 FANK1Q8TC84 345 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 FGF14Q92915 247 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 C8orf44Q96CB5 159 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 CEP19Q96LK0 163 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 TSG101Q99816 390 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 TMEM246Q9BRR3 403 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 MROQ9BYG7 248 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 RACGAP1Q9H0H5 632 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 RNF167Q9H6Y7 350 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms