RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 RNF133Q8WVZ7 376 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 GCDHQ92947 438 aaPredicted RBP5.51□□□□□ -1.53
CLK1-210ENST00000473565 NEDD4LQ96PU5 975 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 G6PC2Q9NQR9 355 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 KLHL9Q9P2J3 617 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 OR52A1Q9UKL2 312 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 MRPS7Q9Y2R9 242 aaKnown RBP5.51□□□□□ -1.53
CLK1-210ENST00000473565 LOC107986453A0A1B0GWG9 222 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 GJE1A6NN92 205 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 NME2P1O60361 137 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 ZNF254O75437 659 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 AQP8O94778 261 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 CEACAM1P13688 526 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 CSRP1P21291 193 aaKnown RBP5.5□□□□□ -1.53
CLK1-210ENST00000473565 NME2P22392 152 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 LHX2P50458 406 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 CD300CQ08708 224 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 C9orf135Q5VTT2 229 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 MZT2AQ6P582 158 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 PAMR1Q6UXH9 720 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 GLCCI1Q86VQ1 547 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 TPRA1Q86W33 373 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 OR51A2Q8NGJ7 313 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 OR2AJ1Q8NGZ0 328 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 FNDC9Q8TBE3 224 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 KCNE4Q8WWG9 221 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 IP6K3Q96PC2 410 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 ULBP2Q9BZM5 246 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 PPP1R3EQ9H7J1 279 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 TCF7L1Q9HCS4 588 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 FAIMQ9NVQ4 179 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 ZNF319Q9P2F9 582 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 R4GMQ9 66 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 LOC102725191A0A1B0GVB3 256 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 DCDC2BA2VCK2 349 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 GPR171O14626 319 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 TLX3O43711 291 aaPredicted RBP5.5□□□□□ -1.53
CLK1-210ENST00000473565 LANCL1O43813 399 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 HRGP04196 525 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 CD1AP06126 327 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 PTHLHP12272 177 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 PRSS12P56730 875 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 CLDN18P56856 261 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 RASGEF1BQ0VAM2 473 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 HYAL4Q2M3T9 481 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 ZNF766Q5HY98 468 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 FCRLAQ7L513 359 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 NRARPQ7Z6K4 114 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 LRRTM1Q86UE6 522 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 Q8N402 240 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 CELF2-AS1Q8N7Q2 184 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 PLPP7Q8NBV4 271 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 TMEM54Q969K7 222 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 C1orf198Q9H425 327 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 CRLF2Q9HC73 371 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 DDX28Q9NUL7 540 aaKnown RBP5.5□□□□□ -1.53
CLK1-210ENST00000473565 TAS2R4Q9NYW5 299 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 MYEF2Q9P2K5 600 aaKnown RBP5.5□□□□□ -1.53
CLK1-210ENST00000473565 B4GALT7Q9UBV7 327 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 SLC5A6Q9Y289 635 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 MYO7BQ6PIF6 2116 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 BSNQ9UPA5 3926 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 TRBV5-7A0A0A0MS05 114 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 IFITM5A6NNB3 132 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 E9PLN8 166 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 DHHO43323 396 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 VAMP5O95183 116 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 HPNP05981 417 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 DBHP09172 617 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 TMIGD3P0DMS9 266 aaPredicted RBP5.5□□□□□ -1.53
CLK1-210ENST00000473565 B4GALT1P15291 398 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 CD82P27701 267 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 CLN3Q13286 438 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 CAMK2BQ13554 666 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 TAF13Q15543 124 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 BCL2L15Q5TBC7 163 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 FDX2Q6P4F2 183 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 XKRXQ6PP77 449 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 AAED1Q7RTV5 226 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 PRSS45Q7RTY3 260 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 ASB5Q8WWX0 329 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 NABP1Q96AH0 204 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 ZFP3Q96NJ6 502 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 ABHD1Q96SE0 405 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 GAL3ST1Q99999 423 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 SOSTQ9BQB4 213 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 LIN7BQ9HAP6 207 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 PNRC2Q9NPJ4 139 aaKnown RBP5.5□□□□□ -1.53
CLK1-210ENST00000473565 FAM206AQ9NX38 181 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 CGGBP1Q9UFW8 167 aaPredicted RBP5.5□□□□□ -1.53
CLK1-210ENST00000473565 FOXD3Q9UJU5 478 aaPredicted RBP5.5□□□□□ -1.53
CLK1-210ENST00000473565 DHDHQ9UQ10 334 aa5.5□□□□□ -1.53
CLK1-210ENST00000473565 CHD8Q9HCK8 2581 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 FUOMA2VDF0 154 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 ANXA2P2A6NMY6 339 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 EFSO43281 561 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 SLC43A1O75387 559 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 GLSO94925 669 aaPredicted RBP5.49□□□□□ -1.53
CLK1-210ENST00000473565 TTRP02766 147 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 ANXA2P07355 339 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms