RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 ZNF404Q494X3 552 aa10.48□□□□□ -0.73
TRAF4-209ENST00000473421 ZMAT1Q5H9K5 638 aa10.48□□□□□ -0.73
TRAF4-209ENST00000473421 OR2T2Q6IF00 324 aa10.48□□□□□ -0.73
TRAF4-209ENST00000473421 BTNL3Q6UXE8 466 aa10.48□□□□□ -0.73
TRAF4-209ENST00000473421 VASH1Q7L8A9 365 aaPredicted RBP10.48□□□□□ -0.73
TRAF4-209ENST00000473421 MOGAT3Q86VF5 341 aa10.48□□□□□ -0.73
TRAF4-209ENST00000473421 ALDH16A1Q8IZ83 802 aa10.48□□□□□ -0.73
TRAF4-209ENST00000473421 ATG16L2Q8NAA4 619 aa10.48□□□□□ -0.73
TRAF4-209ENST00000473421 TMEM239Q8WW34 195 aa10.48□□□□□ -0.73
TRAF4-209ENST00000473421 NEIL1Q96FI4 390 aaPredicted RBP10.48□□□□□ -0.73
TRAF4-209ENST00000473421 THOC1Q96FV9 657 aaKnown RBP10.48□□□□□ -0.73
TRAF4-209ENST00000473421 TBX15Q96SF7 602 aa10.48□□□□□ -0.73
TRAF4-209ENST00000473421 PCGF1Q9BSM1 259 aa10.48□□□□□ -0.73
TRAF4-209ENST00000473421 KAT8Q9H7Z6 458 aaKnown RBP10.48□□□□□ -0.73
TRAF4-209ENST00000473421 EVA1AQ9H8M9 152 aa10.48□□□□□ -0.73
TRAF4-209ENST00000473421 POLE4Q9NR33 117 aa10.48□□□□□ -0.73
TRAF4-209ENST00000473421 TBCCD1Q9NVR7 557 aa10.48□□□□□ -0.73
TRAF4-209ENST00000473421 RIMS3Q9UJD0 308 aa10.48□□□□□ -0.73
TRAF4-209ENST00000473421 ZNF281Q9Y2X9 895 aa10.48□□□□□ -0.73
TRAF4-209ENST00000473421 SH3GLB1Q9Y371 365 aa10.48□□□□□ -0.73
TRAF4-209ENST00000473421 RYR3Q15413 4870 aa10.48□□□□□ -0.73
TRAF4-209ENST00000473421 CENPVL3A0A0U1RRI6 287 aa10.47□□□□□ -0.73
TRAF4-209ENST00000473421 A0A1B0GUS0 222 aa10.47□□□□□ -0.73
TRAF4-209ENST00000473421 G3V4G9 280 aa10.47□□□□□ -0.73
TRAF4-209ENST00000473421 HLA-DPB1P04440 258 aa10.47□□□□□ -0.73
TRAF4-209ENST00000473421 CRYBA1P05813 215 aa10.47□□□□□ -0.73
TRAF4-209ENST00000473421 MMP9P14780 707 aa10.47□□□□□ -0.73
TRAF4-209ENST00000473421 ZNF26P17031 533 aaPredicted RBP10.47□□□□□ -0.73
TRAF4-209ENST00000473421 GSTM3P21266 225 aa10.47□□□□□ -0.73
TRAF4-209ENST00000473421 MSR1P21757 451 aa10.47□□□□□ -0.73
TRAF4-209ENST00000473421 TNFSF4P23510 183 aa10.47□□□□□ -0.73
TRAF4-209ENST00000473421 HTR5AP47898 357 aa10.47□□□□□ -0.73
TRAF4-209ENST00000473421 PITPNBP48739 271 aa10.47□□□□□ -0.73
TRAF4-209ENST00000473421 CTXN1P60606 82 aa10.47□□□□□ -0.73
TRAF4-209ENST00000473421 STX1BP61266 288 aa10.47□□□□□ -0.73
TRAF4-209ENST00000473421 RPL27P61353 136 aaKnown RBP10.47□□□□□ -0.73
TRAF4-209ENST00000473421 TAF9Q16594 264 aa10.47□□□□□ -0.73
TRAF4-209ENST00000473421 ALG10Q5BKT4 473 aa10.47□□□□□ -0.73
TRAF4-209ENST00000473421 ZNF362Q5T0B9 420 aaPredicted RBP10.47□□□□□ -0.73
TRAF4-209ENST00000473421 WDR25Q64LD2 544 aaPredicted RBP10.47□□□□□ -0.73
TRAF4-209ENST00000473421 UNQ6126/PRO20091Q6UXV3 157 aa10.47□□□□□ -0.73
TRAF4-209ENST00000473421 SLC30A8Q8IWU4 369 aa10.47□□□□□ -0.73
TRAF4-209ENST00000473421 MUC20Q8N307 709 aaPredicted RBP10.47□□□□□ -0.73
TRAF4-209ENST00000473421 OR10A6Q8NH74 314 aa10.47□□□□□ -0.73
TRAF4-209ENST00000473421 CGREF1Q99674 301 aa10.47□□□□□ -0.73
TRAF4-209ENST00000473421 ALG12Q9BV10 488 aa10.47□□□□□ -0.73
TRAF4-209ENST00000473421 WDR76Q9H967 626 aa10.47□□□□□ -0.73
TRAF4-209ENST00000473421 PTTG3PQ9NZH4 202 aa10.47□□□□□ -0.73
TRAF4-209ENST00000473421 CTSZQ9UBR2 303 aa10.47□□□□□ -0.73
TRAF4-209ENST00000473421 HIF3AQ9Y2N7 669 aa10.47□□□□□ -0.73
TRAF4-209ENST00000473421 TRAV27A0A087WT01 109 aa10.46□□□□□ -0.73
TRAF4-209ENST00000473421 NPIPB13A6NJU9 1138 aa10.46□□□□□ -0.73
TRAF4-209ENST00000473421 SLC22A31A6NKX4 558 aa10.46□□□□□ -0.73
TRAF4-209ENST00000473421 NPIPB4C9JG80 1138 aa10.46□□□□□ -0.73
TRAF4-209ENST00000473421 FBP2O00757 339 aa10.46□□□□□ -0.73
TRAF4-209ENST00000473421 TNFRSF13BO14836 293 aaPredicted RBP10.46□□□□□ -0.73
TRAF4-209ENST00000473421 TIMM23O14925 209 aa10.46□□□□□ -0.73
TRAF4-209ENST00000473421 GPR137BO60478 399 aa10.46□□□□□ -0.73
TRAF4-209ENST00000473421 DOK2O60496 412 aa10.46□□□□□ -0.73
TRAF4-209ENST00000473421 CLPXO76031 633 aa10.46□□□□□ -0.73
TRAF4-209ENST00000473421 CFHR2P36980 270 aa10.46□□□□□ -0.73
TRAF4-209ENST00000473421 MAGOHP61326 146 aaKnown RBP10.46□□□□□ -0.73
TRAF4-209ENST00000473421 PRB3Q04118 309 aaPredicted RBP10.46□□□□□ -0.73
TRAF4-209ENST00000473421 CCDC92Q53HC0 331 aaPredicted RBP10.46□□□□□ -0.73
TRAF4-209ENST00000473421 FBLN7Q53RD9 439 aa10.46□□□□□ -0.73
TRAF4-209ENST00000473421 Q6ZPA2 131 aa10.46□□□□□ -0.73
TRAF4-209ENST00000473421 Q6ZSV7 163 aa10.46□□□□□ -0.73
TRAF4-209ENST00000473421 ZER1Q7Z7L7 766 aa10.46□□□□□ -0.73
TRAF4-209ENST00000473421 DHDDSQ86SQ9 333 aa10.46□□□□□ -0.73
TRAF4-209ENST00000473421 C1orf174Q8IYL3 243 aa10.46□□□□□ -0.73
TRAF4-209ENST00000473421 BHLHE23Q8NDY6 225 aa10.46□□□□□ -0.73
TRAF4-209ENST00000473421 OR51A7Q8NH64 312 aa10.46□□□□□ -0.73
TRAF4-209ENST00000473421 UBE2FQ969M7 185 aa10.46□□□□□ -0.73
TRAF4-209ENST00000473421 RBP7Q96R05 134 aa10.46□□□□□ -0.73
TRAF4-209ENST00000473421 RASSF4Q9H2L5 321 aa10.46□□□□□ -0.73
TRAF4-209ENST00000473421 ASH2LQ9UBL3 628 aa10.46□□□□□ -0.73
TRAF4-209ENST00000473421 MIOXQ9UGB7 285 aa10.46□□□□□ -0.73
TRAF4-209ENST00000473421 CORO2BQ9UQ03 480 aa10.46□□□□□ -0.73
TRAF4-209ENST00000473421 ADAM18Q9Y3Q7 739 aa10.46□□□□□ -0.73
TRAF4-209ENST00000473421 A0A0U1RQK1 487 aa10.45□□□□□ -0.74
TRAF4-209ENST00000473421 C12orf71A8MTZ7 269 aa10.45□□□□□ -0.74
TRAF4-209ENST00000473421 POLR3GO15318 223 aaPredicted RBP10.45□□□□□ -0.74
TRAF4-209ENST00000473421 SGCEO43556 437 aa10.45□□□□□ -0.74
TRAF4-209ENST00000473421 COX5BP10606 129 aa10.45□□□□□ -0.74
TRAF4-209ENST00000473421 CTLA4P16410 223 aa10.45□□□□□ -0.74
TRAF4-209ENST00000473421 ANOS1P23352 680 aa10.45□□□□□ -0.74
TRAF4-209ENST00000473421 RBM34P42696 430 aaKnown RBP10.45□□□□□ -0.74
TRAF4-209ENST00000473421 SLC18A1P54219 525 aa10.45□□□□□ -0.74
TRAF4-209ENST00000473421 TAS2R41P59536 307 aa10.45□□□□□ -0.74
TRAF4-209ENST00000473421 PCBD1P61457 104 aa10.45□□□□□ -0.74
TRAF4-209ENST00000473421 MAB21L1Q13394 359 aa10.45□□□□□ -0.74
TRAF4-209ENST00000473421 MPPED2Q15777 294 aa10.45□□□□□ -0.74
TRAF4-209ENST00000473421 RSPO1Q2MKA7 263 aaPredicted RBP10.45□□□□□ -0.74
TRAF4-209ENST00000473421 BEAN1Q3B7T3 259 aa10.45□□□□□ -0.74
TRAF4-209ENST00000473421 GPR157Q5UAW9 335 aa10.45□□□□□ -0.74
TRAF4-209ENST00000473421 ZNF620Q6ZNG0 422 aa10.45□□□□□ -0.74
TRAF4-209ENST00000473421 HDDC2Q7Z4H3 204 aa10.45□□□□□ -0.74
TRAF4-209ENST00000473421 PATL1Q86TB9 770 aaKnown RBP10.45□□□□□ -0.74
TRAF4-209ENST00000473421 PDZD9Q8IXQ8 264 aa10.45□□□□□ -0.74
TRAF4-209ENST00000473421 FGFRL1Q8N441 504 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms