RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 B3GLCTQ6Y288 498 aa16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 C20orf204Q6ZNR8 217 aa16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 CFAP77Q6ZQR2 320 aa16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 ENTHD1Q8IYW4 607 aa16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 OR1F12Q8NHA8 337 aa16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 IPCEF1Q8WWN9 437 aaPredicted RBP16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 NEUROG1Q92886 237 aa16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 MAP6Q96JE9 813 aa16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 LURAP1Q96LR2 239 aa16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 ZNF582Q96NG8 517 aaPredicted RBP16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 ADI1Q9BV57 179 aa16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 UBTD1Q9HAC8 227 aa16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 CISD1Q9NZ45 108 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 WARS2Q9UGM6 360 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 CACNA1DQ01668 2161 aa16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 E7EQL1 145 aa16.41■□□□□ 0.22
CTDSP1-207ENST00000473420 GABRB1P18505 474 aa16.41■□□□□ 0.22
CTDSP1-207ENST00000473420 HTR1FP30939 366 aa16.41■□□□□ 0.22
CTDSP1-207ENST00000473420 RPS27P42677 84 aaKnown RBP16.41■□□□□ 0.22
CTDSP1-207ENST00000473420 NKX6-1P78426 367 aaPredicted RBP16.41■□□□□ 0.22
CTDSP1-207ENST00000473420 IL18R1Q13478 541 aa16.41■□□□□ 0.22
CTDSP1-207ENST00000473420 ZNF544Q6NX49 715 aa16.41■□□□□ 0.22
CTDSP1-207ENST00000473420 RHOUQ7L0Q8 258 aa16.41■□□□□ 0.22
CTDSP1-207ENST00000473420 SLC16A9Q7RTY1 509 aa16.41■□□□□ 0.22
CTDSP1-207ENST00000473420 DPY19L4Q7Z388 723 aa16.41■□□□□ 0.22
CTDSP1-207ENST00000473420 DCXRQ7Z4W1 244 aa16.41■□□□□ 0.22
CTDSP1-207ENST00000473420 ZNF454Q8N9F8 522 aa16.41■□□□□ 0.22
CTDSP1-207ENST00000473420 OTOSQ8NHW6 89 aa16.41■□□□□ 0.22
CTDSP1-207ENST00000473420 ST7LQ8TDW4 575 aa16.41■□□□□ 0.22
CTDSP1-207ENST00000473420 CYGBQ8WWM9 190 aa16.41■□□□□ 0.22
CTDSP1-207ENST00000473420 DCLRE1CQ96SD1 692 aaKnown RBP16.41■□□□□ 0.22
CTDSP1-207ENST00000473420 DHRS9Q9BPW9 319 aa16.41■□□□□ 0.22
CTDSP1-207ENST00000473420 YIPF3Q9GZM5 350 aa16.41■□□□□ 0.22
CTDSP1-207ENST00000473420 ZNF442Q9H7R0 627 aa16.41■□□□□ 0.22
CTDSP1-207ENST00000473420 PNRC2Q9NPJ4 139 aaKnown RBP16.41■□□□□ 0.22
CTDSP1-207ENST00000473420 EDARQ9UNE0 448 aa16.41■□□□□ 0.22
CTDSP1-207ENST00000473420 ABCA12Q86UK0 2595 aa16.41■□□□□ 0.22
CTDSP1-207ENST00000473420 PLCE1Q9P212 2302 aa16.41■□□□□ 0.22
CTDSP1-207ENST00000473420 C5orf49A4QMS7 147 aa16.4■□□□□ 0.22
CTDSP1-207ENST00000473420 SNTNA6NMZ2 147 aa16.4■□□□□ 0.22
CTDSP1-207ENST00000473420 SELENOFO60613 162 aa16.4■□□□□ 0.22
CTDSP1-207ENST00000473420 CCL2P13500 99 aa16.4■□□□□ 0.22
CTDSP1-207ENST00000473420 CAPGP40121 348 aa16.4■□□□□ 0.22
CTDSP1-207ENST00000473420 RPS23P62266 143 aaKnown RBP16.4■□□□□ 0.22
CTDSP1-207ENST00000473420 POU4F2Q12837 409 aa16.4■□□□□ 0.22
CTDSP1-207ENST00000473420 SNTB2Q13425 540 aaKnown RBP16.4■□□□□ 0.22
CTDSP1-207ENST00000473420 EIF2B1Q14232 305 aaKnown RBP16.4■□□□□ 0.22
CTDSP1-207ENST00000473420 ZNF691Q5VV52 312 aa16.4■□□□□ 0.22
CTDSP1-207ENST00000473420 ARL9Q6T311 187 aa16.4■□□□□ 0.22
CTDSP1-207ENST00000473420 UNQ6126/PRO20091Q6UXV3 157 aa16.4■□□□□ 0.22
CTDSP1-207ENST00000473420 C1orf174Q8IYL3 243 aa16.4■□□□□ 0.22
CTDSP1-207ENST00000473420 PAQR4Q8N4S7 273 aaPredicted RBP16.4■□□□□ 0.22
CTDSP1-207ENST00000473420 SETD9Q8NE22 299 aa16.4■□□□□ 0.22
CTDSP1-207ENST00000473420 OR10S1Q8NGN2 331 aa16.4■□□□□ 0.22
CTDSP1-207ENST00000473420 RHOXF1Q8NHV9 184 aa16.4■□□□□ 0.22
CTDSP1-207ENST00000473420 UBE2FQ969M7 185 aa16.4■□□□□ 0.22
CTDSP1-207ENST00000473420 CNN2Q99439 309 aaKnown RBP16.4■□□□□ 0.22
CTDSP1-207ENST00000473420 MNTQ99583 582 aa16.4■□□□□ 0.22
CTDSP1-207ENST00000473420 ATF6BQ99941 703 aa16.4■□□□□ 0.22
CTDSP1-207ENST00000473420 CA10Q9NS85 328 aa16.4■□□□□ 0.22
CTDSP1-207ENST00000473420 DDX28Q9NUL7 540 aaKnown RBP16.4■□□□□ 0.22
CTDSP1-207ENST00000473420 FAIMQ9NVQ4 179 aa16.4■□□□□ 0.22
CTDSP1-207ENST00000473420 DNAJC27Q9NZQ0 273 aa16.4■□□□□ 0.22
CTDSP1-207ENST00000473420 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.4■□□□□ 0.227e-9■□□□□ 10.4
CTDSP1-207ENST00000473420 ZNF878C9JN71 531 aa16.39■□□□□ 0.21
CTDSP1-207ENST00000473420 J3QW42 95 aa16.39■□□□□ 0.21
CTDSP1-207ENST00000473420 CCNOP22674 350 aa16.39■□□□□ 0.21
CTDSP1-207ENST00000473420 APOBEC3AP31941 199 aaPredicted RBP16.39■□□□□ 0.21
CTDSP1-207ENST00000473420 GLRXP35754 106 aa16.39■□□□□ 0.21
CTDSP1-207ENST00000473420 NAA10P41227 235 aaPredicted RBP16.39■□□□□ 0.21
CTDSP1-207ENST00000473420 RAD52P43351 418 aa16.39■□□□□ 0.21
CTDSP1-207ENST00000473420 NUDT6P53370 316 aa16.39■□□□□ 0.21
CTDSP1-207ENST00000473420 KRTAP27-1Q3LI81 207 aa16.39■□□□□ 0.21
CTDSP1-207ENST00000473420 KRT80Q6KB66 452 aa16.39■□□□□ 0.21
CTDSP1-207ENST00000473420 PAMR1Q6UXH9 720 aa16.39■□□□□ 0.21
CTDSP1-207ENST00000473420 SLAMF6Q96DU3 332 aa16.39■□□□□ 0.21
CTDSP1-207ENST00000473420 Q96MT0 163 aa16.39■□□□□ 0.21
CTDSP1-207ENST00000473420 BCL2L14Q9BZR8 327 aa16.39■□□□□ 0.21
CTDSP1-207ENST00000473420 ELOVL3Q9HB03 270 aa16.39■□□□□ 0.21
CTDSP1-207ENST00000473420 ADGRL4Q9HBW9 690 aa16.39■□□□□ 0.21
CTDSP1-207ENST00000473420 CLN6Q9NWW5 311 aa16.39■□□□□ 0.21
CTDSP1-207ENST00000473420 EIF3KQ9UBQ5 218 aaKnown RBP16.39■□□□□ 0.21
CTDSP1-207ENST00000473420 TMEM14AQ9Y6G1 99 aa16.39■□□□□ 0.21
CTDSP1-207ENST00000473420 HSPE1-MOB4S4R3N1 261 aa16.39■□□□□ 0.21
CTDSP1-207ENST00000473420 ITPR2Q14571 2701 aa16.39■□□□□ 0.21
CTDSP1-207ENST00000473420 DSCAMO60469 2012 aa16.38■□□□□ 0.21
CTDSP1-207ENST00000473420 SETXQ7Z333 2677 aaKnown RBP16.38■□□□□ 0.21
CTDSP1-207ENST00000473420 ROS1P08922 2347 aa16.38■□□□□ 0.21
CTDSP1-207ENST00000473420 ENTPD6O75354 484 aa16.38■□□□□ 0.21
CTDSP1-207ENST00000473420 LYNP07948 512 aa16.38■□□□□ 0.21
CTDSP1-207ENST00000473420 DANCRP0C864 163 aa16.38■□□□□ 0.21
CTDSP1-207ENST00000473420 WNT5AP41221 380 aa16.38■□□□□ 0.21
CTDSP1-207ENST00000473420 UCP2P55851 309 aa16.38■□□□□ 0.21
CTDSP1-207ENST00000473420 TMEM154Q6P9G4 183 aa16.38■□□□□ 0.21
CTDSP1-207ENST00000473420 SMAP2Q8WU79 429 aaPredicted RBP16.38■□□□□ 0.21
CTDSP1-207ENST00000473420 RNF133Q8WVZ7 376 aa16.38■□□□□ 0.21
CTDSP1-207ENST00000473420 C4orf45Q96LM5 186 aa16.38■□□□□ 0.21
CTDSP1-207ENST00000473420 ABHD6Q9BV23 337 aa16.38■□□□□ 0.21
CTDSP1-207ENST00000473420 TACC2O95359 2948 aa16.38■□□□□ 0.21
CTDSP1-207ENST00000473420 VSTM5A8MXK1 200 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms