RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 HAVCR1Q96D42 359 aa12.94□□□□□ -0.34
VTI1A-203ENST00000472892 CMBLQ96DG6 245 aa12.94□□□□□ -0.34
VTI1A-203ENST00000472892 RSRC1Q96IZ7 334 aaKnown RBP12.94□□□□□ -0.34
VTI1A-203ENST00000472892 GPA33Q99795 319 aa12.94□□□□□ -0.34
VTI1A-203ENST00000472892 TMPRSS13Q9BYE2 586 aa12.94□□□□□ -0.34
VTI1A-203ENST00000472892 NUAK2Q9H093 628 aa12.94□□□□□ -0.34
VTI1A-203ENST00000472892 PLEK2Q9NYT0 353 aa12.94□□□□□ -0.34
VTI1A-203ENST00000472892 IL20RAQ9UHF4 553 aa12.94□□□□□ -0.34
VTI1A-203ENST00000472892 PURGQ9UJV8 347 aaKnown RBP12.94□□□□□ -0.34
VTI1A-203ENST00000472892 STARD10Q9Y365 291 aa12.94□□□□□ -0.34
VTI1A-203ENST00000472892 IER3IP1Q9Y5U9 82 aa12.94□□□□□ -0.34
VTI1A-203ENST00000472892 A0A0G2JMP0 313 aa12.93□□□□□ -0.34
VTI1A-203ENST00000472892 A0A0X1KG70 313 aa12.93□□□□□ -0.34
VTI1A-203ENST00000472892 OR6C6A6NF89 314 aa12.93□□□□□ -0.34
VTI1A-203ENST00000472892 UNC119BA6NIH7 251 aa12.93□□□□□ -0.34
VTI1A-203ENST00000472892 J3QLI3 93 aa12.93□□□□□ -0.34
VTI1A-203ENST00000472892 SOCS2O14508 198 aa12.93□□□□□ -0.34
VTI1A-203ENST00000472892 IMPA2O14732 288 aa12.93□□□□□ -0.34
VTI1A-203ENST00000472892 TIMM8AO60220 97 aaPredicted RBP12.93□□□□□ -0.34
VTI1A-203ENST00000472892 DIRAS1O95057 198 aa12.93□□□□□ -0.34
VTI1A-203ENST00000472892 CDKN2AP42771 156 aaKnown RBP12.93□□□□□ -0.34
VTI1A-203ENST00000472892 TNFAIP6P98066 277 aaPredicted RBP12.93□□□□□ -0.34
VTI1A-203ENST00000472892 CCDC92Q53HC0 331 aaPredicted RBP12.93□□□□□ -0.34
VTI1A-203ENST00000472892 FGD3Q5JSP0 725 aa12.93□□□□□ -0.34
VTI1A-203ENST00000472892 OTPQ5XKR4 325 aa12.93□□□□□ -0.34
VTI1A-203ENST00000472892 PTCHD4Q6ZW05 846 aa12.93□□□□□ -0.34
VTI1A-203ENST00000472892 PEG10Q86TG7 708 aaKnown RBP12.93□□□□□ -0.34
VTI1A-203ENST00000472892 SEMA6DQ8NFY4 1073 aa12.93□□□□□ -0.34
VTI1A-203ENST00000472892 OR4M2Q8NGB6 313 aa12.93□□□□□ -0.34
VTI1A-203ENST00000472892 OR1F12Q8NHA8 337 aa12.93□□□□□ -0.34
VTI1A-203ENST00000472892 SLC7A6Q92536 515 aa12.93□□□□□ -0.34
VTI1A-203ENST00000472892 PTP4A1Q93096 173 aa12.93□□□□□ -0.34
VTI1A-203ENST00000472892 SAMD8Q96LT4 415 aa12.93□□□□□ -0.34
VTI1A-203ENST00000472892 COG8Q96MW5 612 aa12.93□□□□□ -0.34
VTI1A-203ENST00000472892 GAL3ST1Q99999 423 aa12.93□□□□□ -0.34
VTI1A-203ENST00000472892 KRCC1Q9NPI7 259 aaPredicted RBP12.93□□□□□ -0.34
VTI1A-203ENST00000472892 ADA2Q9NZK5 511 aa12.93□□□□□ -0.34
VTI1A-203ENST00000472892 ASH2LQ9UBL3 628 aa12.93□□□□□ -0.34
VTI1A-203ENST00000472892 AURKCQ9UQB9 309 aa12.93□□□□□ -0.34
VTI1A-203ENST00000472892 LOC105371242A0A075B767 164 aa12.92□□□□□ -0.34
VTI1A-203ENST00000472892 GMNNO75496 209 aa12.92□□□□□ -0.34
VTI1A-203ENST00000472892 SEMG1P04279 462 aa12.92□□□□□ -0.34
VTI1A-203ENST00000472892 GATA3P23771 443 aa12.92□□□□□ -0.34
VTI1A-203ENST00000472892 RPS6KA3P51812 740 aa12.92□□□□□ -0.34
VTI1A-203ENST00000472892 HIST1H3AP68431 136 aa12.92□□□□□ -0.34
VTI1A-203ENST00000472892 KRT72Q14CN4 511 aa12.92□□□□□ -0.34
VTI1A-203ENST00000472892 HIST2H3PS2Q5TEC6 136 aa12.92□□□□□ -0.34
VTI1A-203ENST00000472892 SMARCD3Q6STE5 483 aa12.92□□□□□ -0.34
VTI1A-203ENST00000472892 Q6ZR03 302 aa12.92□□□□□ -0.34
VTI1A-203ENST00000472892 USP43Q70EL4 1123 aa12.92□□□□□ -0.34
VTI1A-203ENST00000472892 HIST2H3AQ71DI3 136 aa12.92□□□□□ -0.34
VTI1A-203ENST00000472892 C1QL2Q7Z5L3 287 aa12.92□□□□□ -0.34
VTI1A-203ENST00000472892 RNF148Q8N7C7 305 aa12.92□□□□□ -0.34
VTI1A-203ENST00000472892 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.92□□□□□ -0.34
VTI1A-203ENST00000472892 OR52J3Q8NH60 311 aa12.92□□□□□ -0.34
VTI1A-203ENST00000472892 ZNF418Q8TF45 676 aaPredicted RBP12.92□□□□□ -0.34
VTI1A-203ENST00000472892 PYURFQ96I23 114 aa12.92□□□□□ -0.34
VTI1A-203ENST00000472892 RERGLQ9H628 205 aa12.92□□□□□ -0.34
VTI1A-203ENST00000472892 ATPIF1Q9UII2 106 aa12.92□□□□□ -0.34
VTI1A-203ENST00000472892 NPTNQ9Y639 398 aa12.92□□□□□ -0.34
VTI1A-203ENST00000472892 PPIAL4EA0A075B759 164 aa12.91□□□□□ -0.34
VTI1A-203ENST00000472892 PPIAL4CA0A0B4J2A2 164 aa12.91□□□□□ -0.34
VTI1A-203ENST00000472892 PPIAL4DF5H284 164 aa12.91□□□□□ -0.34
VTI1A-203ENST00000472892 C3orf80F5H4A9 247 aa12.91□□□□□ -0.34
VTI1A-203ENST00000472892 J3QW42 95 aa12.91□□□□□ -0.34
VTI1A-203ENST00000472892 RER1O15258 196 aa12.91□□□□□ -0.34
VTI1A-203ENST00000472892 ATP8B1O43520 1251 aa12.91□□□□□ -0.34
VTI1A-203ENST00000472892 SNX3O60493 162 aa12.91□□□□□ -0.34
VTI1A-203ENST00000472892 IGHV2-70P01814 119 aa12.91□□□□□ -0.34
VTI1A-203ENST00000472892 PPIAL4FP0DN26 164 aa12.91□□□□□ -0.34
VTI1A-203ENST00000472892 HSD17B1P14061 328 aa12.91□□□□□ -0.34
VTI1A-203ENST00000472892 RAC2P15153 192 aa12.91□□□□□ -0.34
VTI1A-203ENST00000472892 TNFRSF1AP19438 455 aa12.91□□□□□ -0.34
VTI1A-203ENST00000472892 TNFSF4P23510 183 aa12.91□□□□□ -0.34
VTI1A-203ENST00000472892 CRABP1P29762 137 aa12.91□□□□□ -0.34
VTI1A-203ENST00000472892 SMIM11AP58511 58 aa12.91□□□□□ -0.34
VTI1A-203ENST00000472892 RFX4Q33E94 735 aa12.91□□□□□ -0.34
VTI1A-203ENST00000472892 DCAF12L2Q5VW00 463 aa12.91□□□□□ -0.34
VTI1A-203ENST00000472892 ZNF283Q8N7M2 679 aa12.91□□□□□ -0.34
VTI1A-203ENST00000472892 OR2Z1Q8NG97 314 aa12.91□□□□□ -0.34
VTI1A-203ENST00000472892 DCLRE1CQ96SD1 692 aaKnown RBP12.91□□□□□ -0.34
VTI1A-203ENST00000472892 TMEM106BQ9NUM4 274 aa12.91□□□□□ -0.34
VTI1A-203ENST00000472892 DCAF16Q9NXF7 216 aa12.91□□□□□ -0.34
VTI1A-203ENST00000472892 IL19Q9UHD0 177 aa12.91□□□□□ -0.34
VTI1A-203ENST00000472892 PCDHB10Q9UN67 800 aa12.91□□□□□ -0.34
VTI1A-203ENST00000472892 IGLV1-36A0A0B4J1U3 117 aa12.9□□□□□ -0.34
VTI1A-203ENST00000472892 ISPDA4D126 451 aa12.9□□□□□ -0.34
VTI1A-203ENST00000472892 DCTN6O00399 190 aa12.9□□□□□ -0.34
VTI1A-203ENST00000472892 ARPC3O15145 178 aa12.9□□□□□ -0.34
VTI1A-203ENST00000472892 GPANK1O95872 356 aa12.9□□□□□ -0.34
VTI1A-203ENST00000472892 DBHP09172 617 aa12.9□□□□□ -0.34
VTI1A-203ENST00000472892 SBK2P0C263 348 aa12.9□□□□□ -0.34
VTI1A-203ENST00000472892 EPHA1P21709 976 aa12.9□□□□□ -0.34
VTI1A-203ENST00000472892 ZFP36P26651 326 aaKnown RBP12.9□□□□□ -0.34
VTI1A-203ENST00000472892 RGS6P49758 472 aa12.9□□□□□ -0.34
VTI1A-203ENST00000472892 ERFP50548 548 aa12.9□□□□□ -0.34
VTI1A-203ENST00000472892 HILS1P60008 231 aa12.9□□□□□ -0.34
VTI1A-203ENST00000472892 HNRNPA0Q13151 305 aaKnown RBP12.9□□□□□ -0.34
VTI1A-203ENST00000472892 C1orf94Q6P1W5 598 aa12.9□□□□□ -0.34
VTI1A-203ENST00000472892 PGM2L1Q6PCE3 622 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms