RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 SLC26A10Q8NG04 563 aa12.9□□□□□ -0.34
CALD1-215ENST00000472096 ABHD4Q8TB40 342 aa12.9□□□□□ -0.34
CALD1-215ENST00000472096 GIPC3Q8TF64 312 aa12.9□□□□□ -0.34
CALD1-215ENST00000472096 NIPSNAP1Q9BPW8 284 aa12.9□□□□□ -0.34
CALD1-215ENST00000472096 PIMREGQ9BSJ6 248 aa12.9□□□□□ -0.34
CALD1-215ENST00000472096 MS4A5Q9H3V2 200 aa12.9□□□□□ -0.34
CALD1-215ENST00000472096 ARMC1Q9NVT9 282 aa12.9□□□□□ -0.34
CALD1-215ENST00000472096 PLEK2Q9NYT0 353 aa12.9□□□□□ -0.34
CALD1-215ENST00000472096 EIF3KQ9UBQ5 218 aaKnown RBP12.9□□□□□ -0.34
CALD1-215ENST00000472096 LHFPL6Q9Y693 200 aa12.9□□□□□ -0.34
CALD1-215ENST00000472096 ABCA2Q9BZC7 2435 aa12.9□□□□□ -0.34
CALD1-215ENST00000472096 NF1P21359 2839 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 LOC390937A0A1W2PQ73 354 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 OR6C6A6NF89 314 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 GNGT2O14610 69 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 NAT2P11245 290 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 DAOP14920 347 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 ERFP50548 548 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 RASSF2P50749 326 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 SELENOVP59797 346 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 CBX1P83916 185 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 GLO1Q04760 184 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 LOXL1Q08397 574 aaPredicted RBP12.89□□□□□ -0.35
CALD1-215ENST00000472096 NKPD1Q17RQ9 610 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 ALKBH6Q3KRA9 238 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 CCDC92Q53HC0 331 aaPredicted RBP12.89□□□□□ -0.35
CALD1-215ENST00000472096 SPATA46Q5T0L3 261 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 UNQ6126/PRO20091Q6UXV3 157 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.89□□□□□ -0.35
CALD1-215ENST00000472096 TMEM179BQ7Z7N9 219 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 OR4Q3Q8NH05 313 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 SLC25A40Q8TBP6 338 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 IPCEF1Q8WWN9 437 aaPredicted RBP12.89□□□□□ -0.35
CALD1-215ENST00000472096 MARS2Q96GW9 593 aaKnown RBP12.89□□□□□ -0.35
CALD1-215ENST00000472096 C4orf45Q96LM5 186 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 FEVQ99581 238 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 TSSK6Q9BXA6 273 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 SRA1Q9HD15 236 aaKnown RBP12.89□□□□□ -0.35
CALD1-215ENST00000472096 BRD7Q9NPI1 651 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 SLCO1C1Q9NYB5 712 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 TAAR3PQ9P1P4 343 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 ATPIF1Q9UII2 106 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 BAIAP2Q9UQB8 552 aa12.89□□□□□ -0.35
CALD1-215ENST00000472096 ANK3Q12955 4377 aaKnown RBP12.89□□□□□ -0.35
CALD1-215ENST00000472096 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.89□□□□□ -0.351e-5■■■■□ 21.5
CALD1-215ENST00000472096 MALRD1Q5VYJ5 2156 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 H3BSA7 217 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 RER1O15258 196 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 ATP5HO75947 161 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 NCR1O76036 304 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 ABHD16AO95870 558 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 NGFP01138 241 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 IGHV3-13P01766 116 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 TFP02787 698 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 HOXB4P17483 251 aaPredicted RBP12.88□□□□□ -0.35
CALD1-215ENST00000472096 MPV17P39210 176 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 NR4A2P43354 598 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 PPP1CBP62140 327 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 HIST1H3AP68431 136 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 COX10Q12887 443 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 TMEM255AQ5JRV8 349 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 ZNF362Q5T0B9 420 aaPredicted RBP12.88□□□□□ -0.35
CALD1-215ENST00000472096 HIST2H3PS2Q5TEC6 136 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 CD300LDQ6UXZ3 194 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 HIST2H3AQ71DI3 136 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 C1orf174Q8IYL3 243 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 CYB561A3Q8NBI2 242 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 SLC37A3Q8NCC5 494 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 PAPD5Q8NDF8 572 aaKnown RBP12.88□□□□□ -0.35
CALD1-215ENST00000472096 OR2T33Q8NG76 320 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 SNX33Q8WV41 574 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 SLCO4A1Q96BD0 722 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 DDOQ99489 341 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 OR2J1Q9GZK6 312 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 YY1AP1Q9H869 796 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 ELOVL3Q9HB03 270 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 GPR160Q9UJ42 338 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 NAV3Q8IVL0 2385 aa12.88□□□□□ -0.35
CALD1-215ENST00000472096 SONP18583 2426 aaKnown RBP12.88□□□□□ -0.35
CALD1-215ENST00000472096 C17orf100A8MU93 164 aa12.87□□□□□ -0.35
CALD1-215ENST00000472096 CD5LO43866 347 aa12.87□□□□□ -0.35
CALD1-215ENST00000472096 E2F6O75461 281 aa12.87□□□□□ -0.35
CALD1-215ENST00000472096 USF1P22415 310 aaPredicted RBP12.87□□□□□ -0.35
CALD1-215ENST00000472096 GIFP27352 417 aa12.87□□□□□ -0.35
CALD1-215ENST00000472096 GCH1P30793 250 aa12.87□□□□□ -0.35
CALD1-215ENST00000472096 ARHGDIAP52565 204 aa12.87□□□□□ -0.35
CALD1-215ENST00000472096 TEKQ02763 1124 aa12.87□□□□□ -0.35
CALD1-215ENST00000472096 TNP2Q05952 138 aa12.87□□□□□ -0.35
CALD1-215ENST00000472096 GGTLC2Q14390 218 aa12.87□□□□□ -0.35
CALD1-215ENST00000472096 TMEM249Q2WGJ8 235 aa12.87□□□□□ -0.35
CALD1-215ENST00000472096 ZNF718Q3SXZ3 478 aa12.87□□□□□ -0.35
CALD1-215ENST00000472096 SLC36A3Q495N2 470 aa12.87□□□□□ -0.35
CALD1-215ENST00000472096 MBNL2Q5VZF2 373 aaKnown RBP12.87□□□□□ -0.35
CALD1-215ENST00000472096 CORO6Q6QEF8 472 aa12.87□□□□□ -0.35
CALD1-215ENST00000472096 ARL9Q6T311 187 aa12.87□□□□□ -0.35
CALD1-215ENST00000472096 HS3ST5Q8IZT8 346 aa12.87□□□□□ -0.35
CALD1-215ENST00000472096 ZNF786Q8N393 782 aa12.87□□□□□ -0.35
CALD1-215ENST00000472096 GJC3Q8NFK1 279 aa12.87□□□□□ -0.35
CALD1-215ENST00000472096 OR1F12Q8NHA8 337 aa12.87□□□□□ -0.35
CALD1-215ENST00000472096 TEX47Q8TBZ9 253 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms