RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 ILKQ13418 452 aa2.53□□□□□ -2
CD46-213ENST00000471987 ITIH4Q14624 930 aa2.53□□□□□ -2
CD46-213ENST00000471987 PTGES3Q15185 160 aaKnown RBP2.53□□□□□ -2
CD46-213ENST00000471987 TOMM34Q15785 309 aaPredicted RBP2.53□□□□□ -2
CD46-213ENST00000471987 BSXQ3C1V8 233 aa2.53□□□□□ -2
CD46-213ENST00000471987 PTPN20Q4JDL3 420 aa2.53□□□□□ -2
CD46-213ENST00000471987 CMPK2Q5EBM0 449 aa2.53□□□□□ -2
CD46-213ENST00000471987 PIGGQ5H8A4 983 aa2.53□□□□□ -2
CD46-213ENST00000471987 C6orf226Q5I0X4 101 aa2.53□□□□□ -2
CD46-213ENST00000471987 CD300LGQ6UXG3 332 aa2.53□□□□□ -2
CD46-213ENST00000471987 ASCL4Q6XD76 172 aa2.53□□□□□ -2
CD46-213ENST00000471987 CERS6Q6ZMG9 384 aa2.53□□□□□ -2
CD46-213ENST00000471987 DPY19L2P2Q6ZN68 376 aa2.53□□□□□ -2
CD46-213ENST00000471987 MRPL21Q7Z2W9 205 aaKnown RBP2.53□□□□□ -2
CD46-213ENST00000471987 DPPA2Q7Z7J5 298 aa2.53□□□□□ -2
CD46-213ENST00000471987 TGIF2LXQ8IUE1 241 aa2.53□□□□□ -2
CD46-213ENST00000471987 CRLF3Q8IUI8 442 aa2.53□□□□□ -2
CD46-213ENST00000471987 CYP4Z2PQ8N1L4 340 aa2.53□□□□□ -2
CD46-213ENST00000471987 TMEM35BQ8NCS4 154 aa2.53□□□□□ -2
CD46-213ENST00000471987 OR7G2Q8NG99 324 aa2.53□□□□□ -2
CD46-213ENST00000471987 OR5B17Q8NGF7 314 aa2.53□□□□□ -2
CD46-213ENST00000471987 OR9G4Q8NGQ1 327 aa2.53□□□□□ -2
CD46-213ENST00000471987 OR2L8Q8NGY9 312 aa2.53□□□□□ -2
CD46-213ENST00000471987 OR10J5Q8NHC4 309 aa2.53□□□□□ -2
CD46-213ENST00000471987 RNASE11Q8TAA1 199 aaKnown RBP2.53□□□□□ -2
CD46-213ENST00000471987 NEK7Q8TDX7 302 aa2.53□□□□□ -2
CD46-213ENST00000471987 GIPC3Q8TF64 312 aa2.53□□□□□ -2
CD46-213ENST00000471987 SPRYD4Q8WW59 207 aaPredicted RBP2.53□□□□□ -2
CD46-213ENST00000471987 C22orf15Q8WYQ4 148 aa2.53□□□□□ -2
CD46-213ENST00000471987 ST8SIA1Q92185 356 aa2.53□□□□□ -2
CD46-213ENST00000471987 PIGCQ92535 297 aa2.53□□□□□ -2
CD46-213ENST00000471987 RDH5Q92781 318 aa2.53□□□□□ -2
CD46-213ENST00000471987 PINX1Q96BK5 328 aaKnown RBP2.53□□□□□ -2
CD46-213ENST00000471987 TCEAL4Q96EI5 215 aa2.53□□□□□ -2
CD46-213ENST00000471987 CPB2Q96IY4 423 aa2.53□□□□□ -2
CD46-213ENST00000471987 AKR1E2Q96JD6 320 aa2.53□□□□□ -2
CD46-213ENST00000471987 MBOAT7Q96N66 472 aa2.53□□□□□ -2
CD46-213ENST00000471987 WFIKKN1Q96NZ8 548 aa2.53□□□□□ -2
CD46-213ENST00000471987 P2RY13Q9BPV8 354 aa2.53□□□□□ -2
CD46-213ENST00000471987 UTP23Q9BRU9 249 aaKnown RBP2.53□□□□□ -2
CD46-213ENST00000471987 COPS4Q9BT78 406 aa2.53□□□□□ -2
CD46-213ENST00000471987 RSPO3Q9BXY4 272 aaPredicted RBP2.53□□□□□ -2
CD46-213ENST00000471987 OR2AG1Q9H205 316 aa2.53□□□□□ -2
CD46-213ENST00000471987 ASB7Q9H672 318 aa2.53□□□□□ -2
CD46-213ENST00000471987 WDR55Q9H6Y2 383 aaPredicted RBP2.53□□□□□ -2
CD46-213ENST00000471987 CTPS2Q9NRF8 586 aa2.53□□□□□ -2
CD46-213ENST00000471987 GID8Q9NWU2 228 aa2.53□□□□□ -2
CD46-213ENST00000471987 THUMPD1Q9NXG2 353 aaKnown RBP2.53□□□□□ -2
CD46-213ENST00000471987 TAS2R1Q9NYW7 299 aa2.53□□□□□ -2
CD46-213ENST00000471987 STMN3Q9NZ72 180 aa2.53□□□□□ -2
CD46-213ENST00000471987 ZNF282Q9UDV7 671 aaPredicted RBP2.53□□□□□ -2
CD46-213ENST00000471987 MRM2Q9UI43 246 aaKnown RBP2.53□□□□□ -2
CD46-213ENST00000471987 ANAPC7Q9UJX3 599 aa2.53□□□□□ -2
CD46-213ENST00000471987 NUP50Q9UKX7 468 aa2.53□□□□□ -2
CD46-213ENST00000471987 FOXJ3Q9UPW0 622 aa2.53□□□□□ -2
CD46-213ENST00000471987 ZNF337Q9Y3M9 751 aa2.53□□□□□ -2
CD46-213ENST00000471987 MMACHCQ9Y4U1 282 aa2.53□□□□□ -2
CD46-213ENST00000471987 CDH10Q9Y6N8 788 aa2.53□□□□□ -2
CD46-213ENST00000471987 HIVEP2P31629 2446 aa2.53□□□□□ -2
CD46-213ENST00000471987 KDM6BO15054 1643 aa2.53□□□□□ -2
CD46-213ENST00000471987 SCAPERQ9BY12 1400 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 CEP152O94986 1710 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 PPIAL4EA0A075B759 164 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 PVALEFA0A1B0GWK0 134 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 A0A1W2PQL4 384 aaPredicted RBP2.52□□□□□ -2.01
CD46-213ENST00000471987 SLC5A10A0PJK1 596 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 FAM166BA8MTA8 275 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 E7EWF7 191 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 ATP6V1G2-DDX39BF2Z307 99 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 H3BN98 237 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 SLC31A2O15432 143 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 CST8O60676 142 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 RAMP1O60894 148 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 SERPINB7O75635 380 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 CCNKO75909 580 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 SCGNO76038 276 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 TM7SF2O76062 418 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 VAMP5O95183 116 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 VAPBO95292 243 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 CST1P01037 141 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 IFNA16P05015 189 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 IGHV4-34P06331 123 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 CRHP06850 196 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 SERPINE2P07093 398 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 GP1BAP07359 652 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 DCNP07585 359 aaKnown RBP2.52□□□□□ -2.01
CD46-213ENST00000471987 OCM2P0CE71 109 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 UBCP0CG48 685 aaKnown RBP2.52□□□□□ -2.01
CD46-213ENST00000471987 PPIAL4FP0DN26 164 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 HSPD1P10809 573 aaKnown RBP2.52□□□□□ -2.01
CD46-213ENST00000471987 SLC2A1P11166 492 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 UQCRC2P22695 453 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 ME2P23368 584 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 WARSP23381 471 aaKnown RBP2.52□□□□□ -2.01
CD46-213ENST00000471987 MMP11P24347 488 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 HLA-DMAP28067 261 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 CASP14P31944 242 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 CEACAM3P40198 252 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 CTRLP40313 264 aa2.52□□□□□ -2.01
CD46-213ENST00000471987 NPBWR2P48146 333 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms