RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 SOCS2O14508 198 aa19.07■□□□□ 0.64
C9orf3-213ENST00000471978 IMPA2O14732 288 aa19.07■□□□□ 0.64
C9orf3-213ENST00000471978 RGS9O75916 674 aaPredicted RBP19.07■□□□□ 0.64
C9orf3-213ENST00000471978 EPHA1P21709 976 aa19.07■□□□□ 0.64
C9orf3-213ENST00000471978 LSM6P62312 80 aaKnown RBP19.07■□□□□ 0.64
C9orf3-213ENST00000471978 SEC23BQ15437 767 aa19.07■□□□□ 0.64
C9orf3-213ENST00000471978 C1orf94Q6P1W5 598 aa19.07■□□□□ 0.64
C9orf3-213ENST00000471978 SLC7A6Q92536 515 aa19.07■□□□□ 0.64
C9orf3-213ENST00000471978 CMBLQ96DG6 245 aa19.07■□□□□ 0.64
C9orf3-213ENST00000471978 C7orf34Q96L11 122 aa19.07■□□□□ 0.64
C9orf3-213ENST00000471978 MYLK2Q9H1R3 596 aa19.07■□□□□ 0.64
C9orf3-213ENST00000471978 KRCC1Q9NPI7 259 aaPredicted RBP19.07■□□□□ 0.64
C9orf3-213ENST00000471978 ADA2Q9NZK5 511 aa19.07■□□□□ 0.64
C9orf3-213ENST00000471978 STARD10Q9Y365 291 aa19.07■□□□□ 0.64
C9orf3-213ENST00000471978 UNC119BA6NIH7 251 aa19.06■□□□□ 0.64
C9orf3-213ENST00000471978 GMNNO75496 209 aa19.06■□□□□ 0.64
C9orf3-213ENST00000471978 DIRAS1O95057 198 aa19.06■□□□□ 0.64
C9orf3-213ENST00000471978 KITLGP21583 273 aa19.06■□□□□ 0.64
C9orf3-213ENST00000471978 TNFSF4P23510 183 aa19.06■□□□□ 0.64
C9orf3-213ENST00000471978 HNRNPA0Q13151 305 aaKnown RBP19.06■□□□□ 0.64
C9orf3-213ENST00000471978 KRT72Q14CN4 511 aa19.06■□□□□ 0.64
C9orf3-213ENST00000471978 DPY19L2P2Q6ZN68 376 aa19.06■□□□□ 0.64
C9orf3-213ENST00000471978 PTCHD4Q6ZW05 846 aa19.06■□□□□ 0.64
C9orf3-213ENST00000471978 ADCK1Q86TW2 530 aa19.06■□□□□ 0.64
C9orf3-213ENST00000471978 RNF148Q8N7C7 305 aa19.06■□□□□ 0.64
C9orf3-213ENST00000471978 FAM86B1Q8N7N1 296 aa19.06■□□□□ 0.64
C9orf3-213ENST00000471978 OR2Z1Q8NG97 314 aa19.06■□□□□ 0.64
C9orf3-213ENST00000471978 OR52J3Q8NH60 311 aa19.06■□□□□ 0.64
C9orf3-213ENST00000471978 OR1F12Q8NHA8 337 aa19.06■□□□□ 0.64
C9orf3-213ENST00000471978 ZFAND2BQ8WV99 257 aa19.06■□□□□ 0.64
C9orf3-213ENST00000471978 DCLRE1CQ96SD1 692 aaKnown RBP19.06■□□□□ 0.64
C9orf3-213ENST00000471978 NUAK2Q9H093 628 aa19.06■□□□□ 0.64
C9orf3-213ENST00000471978 DCAF16Q9NXF7 216 aa19.06■□□□□ 0.64
C9orf3-213ENST00000471978 PCDHB10Q9UN67 800 aa19.06■□□□□ 0.64
C9orf3-213ENST00000471978 NPTNQ9Y639 398 aa19.06■□□□□ 0.64
C9orf3-213ENST00000471978 TANC2Q9HCD6 1990 aa19.05■□□□□ 0.64
C9orf3-213ENST00000471978 OR6C6A6NF89 314 aa19.05■□□□□ 0.64
C9orf3-213ENST00000471978 ADRA2CP18825 462 aa19.05■□□□□ 0.64
C9orf3-213ENST00000471978 RPS6KA3P51812 740 aa19.05■□□□□ 0.64
C9orf3-213ENST00000471978 FXYD6P3P58550 94 aa19.05■□□□□ 0.64
C9orf3-213ENST00000471978 LCN2P80188 198 aa19.05■□□□□ 0.64
C9orf3-213ENST00000471978 CCDC92Q53HC0 331 aaPredicted RBP19.05■□□□□ 0.64
C9orf3-213ENST00000471978 Q6ZR03 302 aa19.05■□□□□ 0.64
C9orf3-213ENST00000471978 C1QL2Q7Z5L3 287 aa19.05■□□□□ 0.64
C9orf3-213ENST00000471978 ST7LQ8TDW4 575 aa19.05■□□□□ 0.64
C9orf3-213ENST00000471978 HAVCR1Q96D42 359 aa19.05■□□□□ 0.64
C9orf3-213ENST00000471978 COG8Q96MW5 612 aa19.05■□□□□ 0.64
C9orf3-213ENST00000471978 TMEM106BQ9NUM4 274 aa19.05■□□□□ 0.64
C9orf3-213ENST00000471978 WNK2Q9Y3S1 2297 aa19.04■□□□□ 0.64
C9orf3-213ENST00000471978 TXNDC12O95881 172 aa19.04■□□□□ 0.64
C9orf3-213ENST00000471978 SBK2P0C263 348 aa19.04■□□□□ 0.64
C9orf3-213ENST00000471978 TNFRSF1AP19438 455 aa19.04■□□□□ 0.64
C9orf3-213ENST00000471978 GATA3P23771 443 aa19.04■□□□□ 0.64
C9orf3-213ENST00000471978 PRDX6P30041 224 aa19.04■□□□□ 0.64
C9orf3-213ENST00000471978 CDKN2AP42771 156 aaKnown RBP19.04■□□□□ 0.64
C9orf3-213ENST00000471978 CENPAP49450 140 aa19.04■□□□□ 0.64
C9orf3-213ENST00000471978 SMARCD3Q6STE5 483 aa19.04■□□□□ 0.64
C9orf3-213ENST00000471978 PTP4A1Q93096 173 aa19.04■□□□□ 0.64
C9orf3-213ENST00000471978 DHRS1Q96LJ7 313 aa19.04■□□□□ 0.64
C9orf3-213ENST00000471978 SAMD8Q96LT4 415 aa19.04■□□□□ 0.64
C9orf3-213ENST00000471978 GPA33Q99795 319 aa19.04■□□□□ 0.64
C9orf3-213ENST00000471978 C7orf69Q9H7B7 122 aa19.04■□□□□ 0.64
C9orf3-213ENST00000471978 POLR1DQ9Y2S0 133 aa19.04■□□□□ 0.64
C9orf3-213ENST00000471978 V9GYQ6 96 aa19.04■□□□□ 0.64
C9orf3-213ENST00000471978 RER1O15258 196 aa19.03■□□□□ 0.64
C9orf3-213ENST00000471978 IGHV2-70P01814 119 aa19.03■□□□□ 0.64
C9orf3-213ENST00000471978 DBHP09172 617 aa19.03■□□□□ 0.64
C9orf3-213ENST00000471978 RBMXP38159 391 aaKnown RBP19.03■□□□□ 0.64
C9orf3-213ENST00000471978 ERFP50548 548 aa19.03■□□□□ 0.64
C9orf3-213ENST00000471978 KCNMB1Q16558 191 aa19.03■□□□□ 0.64
C9orf3-213ENST00000471978 C12orf54Q6X4T0 127 aa19.03■□□□□ 0.64
C9orf3-213ENST00000471978 USP43Q70EL4 1123 aa19.03■□□□□ 0.64
C9orf3-213ENST00000471978 NANPQ8TBE9 248 aa19.03■□□□□ 0.64
C9orf3-213ENST00000471978 FUZQ9BT04 418 aa19.03■□□□□ 0.64
C9orf3-213ENST00000471978 GORASP2Q9H8Y8 452 aa19.03■□□□□ 0.64
C9orf3-213ENST00000471978 GPANK1O95872 356 aa19.02■□□□□ 0.64
C9orf3-213ENST00000471978 RAC2P15153 192 aa19.02■□□□□ 0.64
C9orf3-213ENST00000471978 CRABP1P29762 137 aa19.02■□□□□ 0.64
C9orf3-213ENST00000471978 HILS1P60008 231 aa19.02■□□□□ 0.64
C9orf3-213ENST00000471978 DNM1P34Q6PK57 102 aa19.02■□□□□ 0.64
C9orf3-213ENST00000471978 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.02■□□□□ 0.64
C9orf3-213ENST00000471978 ZNF283Q8N7M2 679 aa19.02■□□□□ 0.64
C9orf3-213ENST00000471978 ITLN1Q8WWA0 313 aa19.02■□□□□ 0.64
C9orf3-213ENST00000471978 PYURFQ96I23 114 aa19.02■□□□□ 0.64
C9orf3-213ENST00000471978 TSSK2Q96PF2 358 aa19.02■□□□□ 0.64
C9orf3-213ENST00000471978 ERMAPQ96PL5 475 aaPredicted RBP19.02■□□□□ 0.64
C9orf3-213ENST00000471978 FAM107BQ9H098 131 aa19.02■□□□□ 0.64
C9orf3-213ENST00000471978 IL19Q9UHD0 177 aa19.02■□□□□ 0.64
C9orf3-213ENST00000471978 ATPIF1Q9UII2 106 aa19.02■□□□□ 0.64
C9orf3-213ENST00000471978 DYSFO75923 2080 aa19.01■□□□□ 0.63
C9orf3-213ENST00000471978 J3QW42 95 aa19.01■□□□□ 0.63
C9orf3-213ENST00000471978 SURF4O15260 269 aa19.01■□□□□ 0.63
C9orf3-213ENST00000471978 FOXH1O75593 365 aa19.01■□□□□ 0.63
C9orf3-213ENST00000471978 PPP1R3DO95685 299 aa19.01■□□□□ 0.63
C9orf3-213ENST00000471978 ZFP36P26651 326 aaKnown RBP19.01■□□□□ 0.63
C9orf3-213ENST00000471978 RGS6P49758 472 aa19.01■□□□□ 0.63
C9orf3-213ENST00000471978 SMIM11AP58511 58 aa19.01■□□□□ 0.63
C9orf3-213ENST00000471978 HLXQ14774 488 aaPredicted RBP19.01■□□□□ 0.63
C9orf3-213ENST00000471978 MEP1BQ16820 701 aa19.01■□□□□ 0.63
C9orf3-213ENST00000471978 OR5AS1Q8N127 324 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms