RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 OPN1SWP03999 348 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 BPGMP07738 259 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 ALDOCP09972 364 aaKnown RBP5.68□□□□□ -1.5
HDAC1-204ENST00000471488 KITP10721 976 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 SLC6A2P23975 617 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 EPHA3P29320 983 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 MSX2P35548 267 aaPredicted RBP5.68□□□□□ -1.5
HDAC1-204ENST00000471488 AQP2P41181 271 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 ETV4P43268 484 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 RPL14P50914 215 aaKnown RBP5.68□□□□□ -1.5
HDAC1-204ENST00000471488 DAP3P51398 398 aaKnown RBP5.68□□□□□ -1.5
HDAC1-204ENST00000471488 MVDP53602 400 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 DLX1P56177 255 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 ABCE1P61221 599 aaKnown RBP5.68□□□□□ -1.5
HDAC1-204ENST00000471488 MRPS34P82930 218 aaKnown RBP5.68□□□□□ -1.5
HDAC1-204ENST00000471488 RPL18Q07020 188 aaKnown RBP5.68□□□□□ -1.5
HDAC1-204ENST00000471488 IFFO1Q0D2I5 559 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 RGNQ15493 299 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 GCNT6Q5T4J0 391 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 HHATQ5VTY9 493 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 PRAMEF6Q5VXH4 476 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 OTPQ5XKR4 325 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 PGBD2Q6P3X8 592 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 NHLRC1Q6VVB1 395 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 DCDC5Q6ZRR9 648 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 HDDC2Q7Z4H3 204 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.68□□□□□ -1.5
HDAC1-204ENST00000471488 ARMC8Q8IUR7 673 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 PIP4P2Q8N4L2 257 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 CLDN22Q8N7P3 220 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 ZBTB9Q96C00 473 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 ITCHQ96J02 903 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 OR5M11Q96RB7 305 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 ZNF607Q96SK3 696 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 PAIP2Q9BPZ3 127 aaKnown RBP5.68□□□□□ -1.5
HDAC1-204ENST00000471488 WFDC6Q9BQY6 131 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 TMEM43Q9BTV4 400 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 RERGLQ9H628 205 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 CNTD2Q9H8S5 307 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 GRPEL1Q9HAV7 217 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 EMC7Q9NPA0 242 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 INIPQ9NRY2 104 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 PNPOQ9NVS9 261 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 AIG1Q9NVV5 245 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 NDRG4Q9ULP0 352 aaKnown RBP5.68□□□□□ -1.5
HDAC1-204ENST00000471488 PRORSD1PA6NEY8 169 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 C12orf71A8MTZ7 269 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 H7C1C5 153 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 FAM20BO75063 409 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 FBXO24O75426 580 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 TSPAN9O75954 239 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 GYPAP02724 150 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 IL6P05231 212 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 LIPFP07098 398 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 PF4V1P10720 104 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 CD28P10747 220 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 MMP9P14780 707 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 KITLGP21583 273 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 FPR3P25089 353 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 SLC1A6P48664 564 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 LCN6P62502 163 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 COX10Q12887 443 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 ECH1Q13011 328 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 KLRD1Q13241 179 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 DMRTC1Q5HYR2 192 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 ENTPD8Q5MY95 495 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 INTS11Q5TA45 600 aaKnown RBP5.67□□□□□ -1.5
HDAC1-204ENST00000471488 REEP3Q6NUK4 255 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 DHRS4L2Q6PKH6 230 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 SLC2A7Q6PXP3 512 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 BTN2A1Q7KYR7 527 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 IGFN1Q86VF2 1251 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 LDLRAD3Q86YD5 345 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 C10orf111Q8N326 155 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 PNKDQ8N490 385 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 SPERTQ8NA61 448 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 OR4F17Q8NGA8 305 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 OR13G1Q8NGZ3 307 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 MOSPD2Q8NHP6 518 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 ASB10Q8WXI3 467 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 HDAC2Q92769 488 aaKnown RBP5.67□□□□□ -1.5
HDAC1-204ENST00000471488 SLC35B4Q969S0 331 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 NABP1Q96AH0 204 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 ZIM3Q96PE6 472 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 RBP7Q96R05 134 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 OR4F4Q96R69 305 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 WDR55Q9H6Y2 383 aaPredicted RBP5.67□□□□□ -1.5
HDAC1-204ENST00000471488 SMURF1Q9HCE7 757 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 GAR1Q9NY12 217 aaKnown RBP5.67□□□□□ -1.5
HDAC1-204ENST00000471488 ZNRD1Q9P1U0 126 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 CTSZQ9UBR2 303 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 ZNF229Q9UJW7 825 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 RAP2CQ9Y3L5 183 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 UGT2A1Q9Y4X1 527 aa5.67□□□□□ -1.5
HDAC1-204ENST00000471488 IGHV3OR15-7A0A075B7D8 119 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 hCG_1807616A0A1W2PRN6 198 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 WI2-2373I1.2A0A1W2PRP0 233 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 SGCEO43556 437 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 CHP2O43745 196 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 SERPINB7O75635 380 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms