RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 TRAPPC4Q9Y296 219 aa4.74□□□□□ -1.65
SMC5-202ENST00000471372 PLEKHG1Q9ULL1 1385 aa4.74□□□□□ -1.65
SMC5-202ENST00000471372 RAB19A4D1S5 217 aa4.73□□□□□ -1.65
SMC5-202ENST00000471372 EIF4EP06730 217 aaKnown RBP4.73□□□□□ -1.65
SMC5-202ENST00000471372 HOXC4P09017 264 aaPredicted RBP4.73□□□□□ -1.65
SMC5-202ENST00000471372 PSMC3P17980 439 aa4.73□□□□□ -1.65
SMC5-202ENST00000471372 USF1P22415 310 aaPredicted RBP4.73□□□□□ -1.65
SMC5-202ENST00000471372 IVDP26440 423 aa4.73□□□□□ -1.65
SMC5-202ENST00000471372 STX17P56962 302 aa4.73□□□□□ -1.65
SMC5-202ENST00000471372 TIMM10P62072 90 aa4.73□□□□□ -1.65
SMC5-202ENST00000471372 PSMC5P62195 406 aa4.73□□□□□ -1.65
SMC5-202ENST00000471372 RFX4Q33E94 735 aa4.73□□□□□ -1.65
SMC5-202ENST00000471372 FRMPD2BQ6IN97 320 aa4.73□□□□□ -1.65
SMC5-202ENST00000471372 TEX43Q6ZNM6 134 aa4.73□□□□□ -1.65
SMC5-202ENST00000471372 SNX20Q7Z614 316 aa4.73□□□□□ -1.65
SMC5-202ENST00000471372 MRPL55Q7Z7F7 128 aaKnown RBP4.73□□□□□ -1.65
SMC5-202ENST00000471372 UNC93AQ86WB7 457 aa4.73□□□□□ -1.65
SMC5-202ENST00000471372 IQCF2Q8IXL9 164 aa4.73□□□□□ -1.65
SMC5-202ENST00000471372 GPD1LQ8N335 351 aa4.73□□□□□ -1.65
SMC5-202ENST00000471372 MREGQ8N565 214 aa4.73□□□□□ -1.65
SMC5-202ENST00000471372 DUSP18Q8NEJ0 188 aa4.73□□□□□ -1.65
SMC5-202ENST00000471372 OR4D6Q8NGJ1 314 aa4.73□□□□□ -1.65
SMC5-202ENST00000471372 OR8D1Q8WZ84 308 aa4.73□□□□□ -1.65
SMC5-202ENST00000471372 DNAJC19Q96DA6 116 aa4.73□□□□□ -1.65
SMC5-202ENST00000471372 GLT1D1Q96MS3 346 aa4.73□□□□□ -1.65
SMC5-202ENST00000471372 KCNS3Q9BQ31 491 aa4.73□□□□□ -1.65
SMC5-202ENST00000471372 CSNK1G1Q9HCP0 422 aa4.73□□□□□ -1.65
SMC5-202ENST00000471372 STMN3Q9NZ72 180 aa4.73□□□□□ -1.65
SMC5-202ENST00000471372 KCNE3Q9Y6H6 103 aa4.73□□□□□ -1.65
SMC5-202ENST00000471372 PDZK1P1A8MUH7 402 aa4.72□□□□□ -1.65
SMC5-202ENST00000471372 H7C1H1 209 aa4.72□□□□□ -1.65
SMC5-202ENST00000471372 PEX7O00628 323 aa4.72□□□□□ -1.65
SMC5-202ENST00000471372 KLF8O95600 359 aaPredicted RBP4.72□□□□□ -1.65
SMC5-202ENST00000471372 ZNF30P17039 623 aa4.72□□□□□ -1.65
SMC5-202ENST00000471372 HTR2CP28335 458 aa4.72□□□□□ -1.65
SMC5-202ENST00000471372 HTR1EP28566 365 aa4.72□□□□□ -1.65
SMC5-202ENST00000471372 UNC119Q13432 240 aa4.72□□□□□ -1.65
SMC5-202ENST00000471372 C18orf21Q32NC0 220 aaPredicted RBP4.72□□□□□ -1.65
SMC5-202ENST00000471372 SLC25A30Q5SVS4 291 aa4.72□□□□□ -1.65
SMC5-202ENST00000471372 ZNF774Q6NX45 483 aa4.72□□□□□ -1.65
SMC5-202ENST00000471372 SNX31Q8N9S9 440 aa4.72□□□□□ -1.65
SMC5-202ENST00000471372 MDS2Q8NDY4 140 aa4.72□□□□□ -1.65
SMC5-202ENST00000471372 CALN1Q9BXU9 219 aa4.72□□□□□ -1.65
SMC5-202ENST00000471372 ANKHQ9HCJ1 492 aa4.72□□□□□ -1.65
SMC5-202ENST00000471372 PLSCR3Q9NRY6 295 aa4.72□□□□□ -1.65
SMC5-202ENST00000471372 SLC39A1Q9NY26 324 aa4.72□□□□□ -1.65
SMC5-202ENST00000471372 GAKO14976 1311 aa4.72□□□□□ -1.65
SMC5-202ENST00000471372 CENPJQ9HC77 1338 aaPredicted RBP4.72□□□□□ -1.65
SMC5-202ENST00000471372 CAMTA1Q9Y6Y1 1673 aa4.71□□□□□ -1.66
SMC5-202ENST00000471372 OR6C74A6NCV1 312 aa4.71□□□□□ -1.66
SMC5-202ENST00000471372 GJE1A6NN92 205 aa4.71□□□□□ -1.66
SMC5-202ENST00000471372 E7ENQ6 273 aa4.71□□□□□ -1.66
SMC5-202ENST00000471372 XKRYO14609 159 aa4.71□□□□□ -1.66
SMC5-202ENST00000471372 PLEKHA8P1O95397 391 aa4.71□□□□□ -1.66
SMC5-202ENST00000471372 HPRT1P00492 218 aa4.71□□□□□ -1.66
SMC5-202ENST00000471372 TCP1P17987 556 aaKnown RBP4.71□□□□□ -1.66
SMC5-202ENST00000471372 ATF6P18850 670 aa4.71□□□□□ -1.66
SMC5-202ENST00000471372 ZBTB25P24278 435 aa4.71□□□□□ -1.66
SMC5-202ENST00000471372 F2RP25116 425 aa4.71□□□□□ -1.66
SMC5-202ENST00000471372 FABP6P51161 128 aa4.71□□□□□ -1.66
SMC5-202ENST00000471372 GCSAMLQ5JQS6 135 aa4.71□□□□□ -1.66
SMC5-202ENST00000471372 COA6Q5JTJ3 125 aaKnown RBP4.71□□□□□ -1.66
SMC5-202ENST00000471372 WDR82Q6UXN9 313 aa4.71□□□□□ -1.66
SMC5-202ENST00000471372 NDUFAF7Q7L592 441 aa4.71□□□□□ -1.66
SMC5-202ENST00000471372 FAM71AQ8IYT1 594 aa4.71□□□□□ -1.66
SMC5-202ENST00000471372 CCDC54Q8NEL0 328 aa4.71□□□□□ -1.66
SMC5-202ENST00000471372 NPBQ8NG41 125 aa4.71□□□□□ -1.66
SMC5-202ENST00000471372 NRBF2Q96F24 287 aa4.71□□□□□ -1.66
SMC5-202ENST00000471372 ZBED3Q96IU2 234 aaPredicted RBP4.71□□□□□ -1.66
SMC5-202ENST00000471372 SCGB3A2Q96PL1 93 aa4.71□□□□□ -1.66
SMC5-202ENST00000471372 ARMC7Q9H6L4 198 aa4.71□□□□□ -1.66
SMC5-202ENST00000471372 SLC17A7Q9P2U7 560 aa4.71□□□□□ -1.66
SMC5-202ENST00000471372 GMEB1Q9Y692 573 aa4.71□□□□□ -1.66
SMC5-202ENST00000471372 A6NDN8 102 aa4.7□□□□□ -1.66
SMC5-202ENST00000471372 TRAF3IP2O43734 574 aaPredicted RBP4.7□□□□□ -1.66
SMC5-202ENST00000471372 RDH16O75452 317 aa4.7□□□□□ -1.66
SMC5-202ENST00000471372 FUT3P21217 361 aa4.7□□□□□ -1.66
SMC5-202ENST00000471372 DEKP35659 375 aaKnown RBP4.7□□□□□ -1.66
SMC5-202ENST00000471372 CEACAM3P40198 252 aa4.7□□□□□ -1.66
SMC5-202ENST00000471372 ZNF121P58317 390 aaPredicted RBP4.7□□□□□ -1.66
SMC5-202ENST00000471372 KRTAP10-7P60409 375 aaPredicted RBP4.7□□□□□ -1.66
SMC5-202ENST00000471372 ORC2Q13416 577 aaPredicted RBP4.7□□□□□ -1.66
SMC5-202ENST00000471372 ART3Q13508 389 aa4.7□□□□□ -1.66
SMC5-202ENST00000471372 PRPSAP1Q14558 356 aa4.7□□□□□ -1.66
SMC5-202ENST00000471372 ZNF266Q14584 549 aa4.7□□□□□ -1.66
SMC5-202ENST00000471372 VAMP3Q15836 100 aa4.7□□□□□ -1.66
SMC5-202ENST00000471372 NDUFAF6Q330K2 333 aa4.7□□□□□ -1.66
SMC5-202ENST00000471372 ZNF493Q6ZR52 646 aa4.7□□□□□ -1.66
SMC5-202ENST00000471372 STPG2Q8N412 459 aa4.7□□□□□ -1.66
SMC5-202ENST00000471372 CBR4Q8N4T8 237 aa4.7□□□□□ -1.66
SMC5-202ENST00000471372 NPWQ8N729 165 aa4.7□□□□□ -1.66
SMC5-202ENST00000471372 OR10AD1Q8NGE0 317 aa4.7□□□□□ -1.66
SMC5-202ENST00000471372 MCOLN3Q8TDD5 553 aa4.7□□□□□ -1.66
SMC5-202ENST00000471372 LRRC29Q8WV35 223 aa4.7□□□□□ -1.66
SMC5-202ENST00000471372 B3GALT6Q96L58 329 aa4.7□□□□□ -1.66
SMC5-202ENST00000471372 MAGEB18Q96M61 343 aa4.7□□□□□ -1.66
SMC5-202ENST00000471372 AGMATQ9BSE5 352 aa4.7□□□□□ -1.66
SMC5-202ENST00000471372 TNFRSF19Q9NS68 423 aa4.7□□□□□ -1.66
SMC5-202ENST00000471372 SLC25A37Q9NYZ2 338 aa4.7□□□□□ -1.66
SMC5-202ENST00000471372 CTSFQ9UBX1 484 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms