RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 SLC7A13Q8TCU3 470 aa14.76□□□□□ -0.05
COL7A1-208ENST00000470076 HAVCR1Q96D42 359 aa14.76□□□□□ -0.05
COL7A1-208ENST00000470076 CMBLQ96DG6 245 aa14.76□□□□□ -0.05
COL7A1-208ENST00000470076 ZMYND19Q96E35 227 aaPredicted RBP14.76□□□□□ -0.05
COL7A1-208ENST00000470076 DCLRE1CQ96SD1 692 aaKnown RBP14.76□□□□□ -0.05
COL7A1-208ENST00000470076 PLA2G12AQ9BZM1 189 aa14.76□□□□□ -0.05
COL7A1-208ENST00000470076 POFUT1Q9H488 388 aa14.76□□□□□ -0.05
COL7A1-208ENST00000470076 EFCAB1Q9HAE3 211 aa14.76□□□□□ -0.05
COL7A1-208ENST00000470076 DCAF16Q9NXF7 216 aa14.76□□□□□ -0.05
COL7A1-208ENST00000470076 IL19Q9UHD0 177 aa14.76□□□□□ -0.05
COL7A1-208ENST00000470076 STARD10Q9Y365 291 aa14.76□□□□□ -0.05
COL7A1-208ENST00000470076 A0A1W2PRQ8 180 aa14.75□□□□□ -0.05
COL7A1-208ENST00000470076 J3QW42 95 aa14.75□□□□□ -0.05
COL7A1-208ENST00000470076 CCDC22O60826 627 aa14.75□□□□□ -0.05
COL7A1-208ENST00000470076 PTP4A3O75365 173 aa14.75□□□□□ -0.05
COL7A1-208ENST00000470076 KHDRBS3O75525 346 aaKnown RBP14.75□□□□□ -0.05
COL7A1-208ENST00000470076 ZFP36P26651 326 aaKnown RBP14.75□□□□□ -0.05
COL7A1-208ENST00000470076 GUCY1A3Q02108 690 aa14.75□□□□□ -0.05
COL7A1-208ENST00000470076 KRR1Q13601 381 aaKnown RBP14.75□□□□□ -0.05
COL7A1-208ENST00000470076 DGCR6Q14129 220 aa14.75□□□□□ -0.05
COL7A1-208ENST00000470076 C8orf82Q6P1X6 216 aaPredicted RBP14.75□□□□□ -0.05
COL7A1-208ENST00000470076 Q6ZR03 302 aa14.75□□□□□ -0.05
COL7A1-208ENST00000470076 ADCK1Q86TW2 530 aa14.75□□□□□ -0.05
COL7A1-208ENST00000470076 GLB1L2Q8IW92 636 aa14.75□□□□□ -0.05
COL7A1-208ENST00000470076 PTP4A1Q93096 173 aa14.75□□□□□ -0.05
COL7A1-208ENST00000470076 POP5Q969H6 163 aaKnown RBP14.75□□□□□ -0.05
COL7A1-208ENST00000470076 FAM162AQ96A26 154 aa14.75□□□□□ -0.05
COL7A1-208ENST00000470076 RASD2Q96D21 266 aa14.75□□□□□ -0.05
COL7A1-208ENST00000470076 FAM46AQ96IP4 442 aaKnown RBP14.75□□□□□ -0.05
COL7A1-208ENST00000470076 GPX7Q96SL4 187 aaPredicted RBP14.75□□□□□ -0.05
COL7A1-208ENST00000470076 SYT4Q9H2B2 425 aa14.75□□□□□ -0.05
COL7A1-208ENST00000470076 NTN4Q9HB63 628 aa14.75□□□□□ -0.05
COL7A1-208ENST00000470076 PATZ1Q9HBE1 687 aaKnown RBP14.75□□□□□ -0.05
COL7A1-208ENST00000470076 NRIP3Q9NQ35 241 aa14.75□□□□□ -0.05
COL7A1-208ENST00000470076 ASH2LQ9UBL3 628 aa14.75□□□□□ -0.05
COL7A1-208ENST00000470076 EGFL7Q9UHF1 273 aa14.75□□□□□ -0.05
COL7A1-208ENST00000470076 ATPIF1Q9UII2 106 aa14.75□□□□□ -0.05
COL7A1-208ENST00000470076 PPP1R3CQ9UQK1 317 aa14.75□□□□□ -0.05
COL7A1-208ENST00000470076 SIGLEC7Q9Y286 467 aa14.75□□□□□ -0.05
COL7A1-208ENST00000470076 POLR3KQ9Y2Y1 108 aaPredicted RBP14.75□□□□□ -0.05
COL7A1-208ENST00000470076 FAM32AQ9Y421 112 aaKnown RBP14.75□□□□□ -0.05
COL7A1-208ENST00000470076 OR6C6A6NF89 314 aa14.74□□□□□ -0.05
COL7A1-208ENST00000470076 SLC16A7O60669 478 aa14.74□□□□□ -0.05
COL7A1-208ENST00000470076 H1F0P07305 194 aaKnown RBP14.74□□□□□ -0.05
COL7A1-208ENST00000470076 RAC2P15153 192 aa14.74□□□□□ -0.05
COL7A1-208ENST00000470076 RGS6P49758 472 aa14.74□□□□□ -0.05
COL7A1-208ENST00000470076 BTG1P62324 171 aa14.74□□□□□ -0.05
COL7A1-208ENST00000470076 HACD2Q6Y1H2 254 aa14.74□□□□□ -0.05
COL7A1-208ENST00000470076 TSEN54Q7Z6J9 526 aaKnown RBP14.74□□□□□ -0.05
COL7A1-208ENST00000470076 LRRC28Q86X40 367 aaPredicted RBP14.74□□□□□ -0.05
COL7A1-208ENST00000470076 DEFB108BQ8NET1 73 aa14.74□□□□□ -0.05
COL7A1-208ENST00000470076 OR1F12Q8NHA8 337 aa14.74□□□□□ -0.05
COL7A1-208ENST00000470076 KCTD14Q9BQ13 255 aaPredicted RBP14.74□□□□□ -0.05
COL7A1-208ENST00000470076 RERGLQ9H628 205 aa14.74□□□□□ -0.05
COL7A1-208ENST00000470076 VSX1Q9NZR4 365 aaPredicted RBP14.74□□□□□ -0.05
COL7A1-208ENST00000470076 RPS6KA6Q9UK32 745 aa14.74□□□□□ -0.05
COL7A1-208ENST00000470076 COA3Q9Y2R0 106 aaPredicted RBP14.74□□□□□ -0.05
COL7A1-208ENST00000470076 MGAM2Q2M2H8 2515 aa14.74□□□□□ -0.05
COL7A1-208ENST00000470076 IFNL4K9M1U5 179 aa14.73□□□□□ -0.05
COL7A1-208ENST00000470076 RHCEP18577 417 aa14.73□□□□□ -0.05
COL7A1-208ENST00000470076 SLC6A9P48067 706 aa14.73□□□□□ -0.05
COL7A1-208ENST00000470076 ZMYND11Q15326 602 aa14.73□□□□□ -0.05
COL7A1-208ENST00000470076 FGD3Q5JSP0 725 aa14.73□□□□□ -0.05
COL7A1-208ENST00000470076 C1orf94Q6P1W5 598 aa14.73□□□□□ -0.05
COL7A1-208ENST00000470076 ZDHHC22Q8N966 263 aa14.73□□□□□ -0.05
COL7A1-208ENST00000470076 OR5L1Q8NGL2 311 aa14.73□□□□□ -0.05
COL7A1-208ENST00000470076 ITLN1Q8WWA0 313 aa14.73□□□□□ -0.05
COL7A1-208ENST00000470076 SLC7A6Q92536 515 aa14.73□□□□□ -0.05
COL7A1-208ENST00000470076 DVL3Q92997 716 aaPredicted RBP14.73□□□□□ -0.05
COL7A1-208ENST00000470076 RSRC1Q96IZ7 334 aaKnown RBP14.73□□□□□ -0.05
COL7A1-208ENST00000470076 OR2V2Q96R30 315 aa14.73□□□□□ -0.05
COL7A1-208ENST00000470076 SIGLEC11Q96RL6 698 aa14.73□□□□□ -0.05
COL7A1-208ENST00000470076 KRCC1Q9NPI7 259 aaPredicted RBP14.73□□□□□ -0.05
COL7A1-208ENST00000470076 ESM1Q9NQ30 184 aa14.73□□□□□ -0.05
COL7A1-208ENST00000470076 MMP26Q9NRE1 261 aa14.73□□□□□ -0.05
COL7A1-208ENST00000470076 DDX28Q9NUL7 540 aaKnown RBP14.73□□□□□ -0.05
COL7A1-208ENST00000470076 A8MXK9 166 aa14.72□□□□□ -0.05
COL7A1-208ENST00000470076 SOCS2O14508 198 aa14.72□□□□□ -0.05
COL7A1-208ENST00000470076 NCK1P16333 377 aa14.72□□□□□ -0.05
COL7A1-208ENST00000470076 MDH2P40926 338 aaKnown RBP14.72□□□□□ -0.05
COL7A1-208ENST00000470076 OMPP47874 163 aa14.72□□□□□ -0.05
COL7A1-208ENST00000470076 NUDT2P50583 147 aa14.72□□□□□ -0.05
COL7A1-208ENST00000470076 HNRNPA0Q13151 305 aaKnown RBP14.72□□□□□ -0.05
COL7A1-208ENST00000470076 KCNMB1Q16558 191 aa14.72□□□□□ -0.05
COL7A1-208ENST00000470076 CCDC92Q53HC0 331 aaPredicted RBP14.72□□□□□ -0.05
COL7A1-208ENST00000470076 ARMCX4Q5H9R4 360 aa14.72□□□□□ -0.05
COL7A1-208ENST00000470076 SLC27A4Q6P1M0 643 aa14.72□□□□□ -0.05
COL7A1-208ENST00000470076 PGM2L1Q6PCE3 622 aa14.72□□□□□ -0.05
COL7A1-208ENST00000470076 FBXW12Q6X9E4 464 aa14.72□□□□□ -0.05
COL7A1-208ENST00000470076 RBMS3Q6XE24 437 aaKnown RBP14.72□□□□□ -0.05
COL7A1-208ENST00000470076 DPY19L2P2Q6ZN68 376 aa14.72□□□□□ -0.05
COL7A1-208ENST00000470076 MUC20Q8N307 709 aaPredicted RBP14.72□□□□□ -0.05
COL7A1-208ENST00000470076 SGMS2Q8NHU3 365 aa14.72□□□□□ -0.05
COL7A1-208ENST00000470076 C22orf15Q8WYQ4 148 aa14.72□□□□□ -0.05
COL7A1-208ENST00000470076 NUAK2Q9H093 628 aa14.72□□□□□ -0.05
COL7A1-208ENST00000470076 NDUFAF4Q9P032 175 aa14.72□□□□□ -0.05
COL7A1-208ENST00000470076 ABCD2Q9UBJ2 740 aa14.72□□□□□ -0.05
COL7A1-208ENST00000470076 AURKCQ9UQB9 309 aa14.72□□□□□ -0.05
COL7A1-208ENST00000470076 POLR1DQ9Y2S0 133 aa14.72□□□□□ -0.05
COL7A1-208ENST00000470076 IER3IP1Q9Y5U9 82 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms