RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 TMEM100Q9NV29 134 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 ZNF629Q9UEG4 869 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-205ENST00000469550 PCDHB10Q9UN67 800 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 ADAM18Q9Y3Q7 739 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 LOXL2Q9Y4K0 774 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 TRAV8-7A0A075B6U6 113 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 A0A087WUJ7 227 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 LOC100289279A0A1B0GTE1 492 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 SYNDIG1LA6NDD5 238 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 URADA6NGE7 173 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 GPR31O00270 319 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 IMPA2O14732 288 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 SIGLEC5O15389 551 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 P2RX6O15547 441 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 SLC25A12O75746 678 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 RAB3DO95716 219 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 CD74P04233 296 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 SLC35G6P0C7Q6 338 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 OR8G3PP0DMU2 310 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 ZNF10P21506 573 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-205ENST00000469550 GABRA3P34903 492 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 SOX2P48431 317 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 NR0B1P51843 470 aaKnown RBP8.62□□□□□ -1.03
HDAC3-205ENST00000469550 ARHGDIBP52566 201 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 GUCA2AQ02747 115 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 MANEAQ5SRI9 462 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 RD3Q7Z3Z2 195 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 CDC20BQ86Y33 519 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 SKA3Q8IX90 412 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 OR51D1Q8NGF3 324 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 OR1S2Q8NGQ3 325 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 GPBAR1Q8TDU6 330 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 GLYATL2Q8WU03 294 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 PTCHD1Q96NR3 888 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 ZNF471Q9BX82 626 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-205ENST00000469550 SEMA6CQ9H3T2 930 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 KIR3DX1Q9H7L2 352 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 FKRPQ9H9S5 495 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 MBD2Q9UBB5 411 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 ARHGEF17Q96PE2 2063 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-205ENST00000469550 UNC13CQ8NB66 2214 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 A0A0A6YYH2 397 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 TMEM72A0PK05 275 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 A6NJ64 397 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 SLC17A2O00624 439 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 SNAPINO95295 136 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 MAS1P04201 325 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 JMJD7P0C870 316 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 CD37P11049 281 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 CD79AP11912 226 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 MPZP25189 248 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 CD34P28906 385 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 BDKRB2P30411 391 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 POU3F4P49335 361 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 NAAAQ02083 359 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 EGR3Q06889 387 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 RASGEF1BQ0VAM2 473 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 MGAT2Q10469 447 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 PRICKLE4Q2TBC4 344 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 FAM166AQ6J272 317 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 FDX2Q6P4F2 183 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 TAF8Q7Z7C8 310 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 DTX1Q86Y01 620 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 OR2G2Q8NGZ5 317 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 ZPLD1Q8TCW7 415 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 LIPHQ8WWY8 451 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 TMEM106AQ96A25 262 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 SLC25A28Q96A46 364 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 CTHRC1Q96CG8 243 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 SEH1LQ96EE3 360 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 ZNF75AQ96N20 296 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 ZNF304Q9HCX3 659 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 PHPT1Q9NRX4 125 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-205ENST00000469550 ZNF230Q9UIE0 474 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-205ENST00000469550 PLEKHA6Q9Y2H5 1048 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 HEBP2Q9Y5Z4 205 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 SETXQ7Z333 2677 aaKnown RBP8.61□□□□□ -1.03
HDAC3-205ENST00000469550 ATMQ13315 3056 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 PRSS38A1L453 326 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 EFCAB7A8K855 629 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 F8VVB4 439 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 F8VWA3 439 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 SULT2B1O00204 365 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 PSMD9O00233 223 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 DOK2O60496 412 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 RPP14O95059 124 aaKnown RBP8.61□□□□□ -1.03
HDAC3-205ENST00000469550 GPR75O95800 540 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 TXNDC12O95881 172 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 ZNF735P0CB33 412 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 ADCYAP1P18509 176 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 DLSTP36957 453 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 CASRP41180 1078 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 EMDP50402 254 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 EFNB2P52799 333 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 DHRS2Q13268 280 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 SQSTM1Q13501 440 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 INPP5JQ15735 1006 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-205ENST00000469550 RAB11BQ15907 218 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 ZNF141Q15928 474 aa8.61□□□□□ -1.03
HDAC3-205ENST00000469550 GUCA2BQ16661 112 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms