RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 TOX4O94842 621 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 BCHEP06276 602 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 PGA4P0DJD7 388 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 PGA3P0DJD8 388 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 UQCRBP14927 111 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 STOMP27105 288 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 HOXD3P31249 432 aaPredicted RBP4.32□□□□□ -1.72
PTPN4-209ENST00000469511 APLNRP35414 380 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 PITPNBP48739 271 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 SLURP1P55000 103 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 NME5P56597 212 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 RPL15P61313 204 aaKnown RBP4.32□□□□□ -1.72
PTPN4-209ENST00000469511 ARF6P62330 175 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 ERVK-25P63136 954 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 PUDPQ08623 228 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 BST1Q10588 318 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 MOGQ16653 247 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 GAGE13Q4V321 117 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 TTMPQ5BVD1 217 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 MTX3Q5HYI7 312 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 OTPQ5XKR4 325 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 PGBD2Q6P3X8 592 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 Q6ZTK2 550 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 SLC35D2Q76EJ3 337 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 KRT77Q7Z794 578 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 PEX5LQ8IYB4 626 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 ZNF440Q8IYI8 595 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 LRRC34Q8IZ02 419 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 OR5AS1Q8N127 324 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 C4orf33Q8N1A6 199 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 C10orf111Q8N326 155 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 NATD1Q8N6N6 113 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 CCDC63Q8NA47 563 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 ADPRHL1Q8NDY3 354 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 OR10AD1Q8NGE0 317 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 OR1J2Q8NGS2 313 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 SLC38A5Q8WUX1 472 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 C17orf50Q8WW18 174 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 IFT81Q8WYA0 676 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 SLC38A4Q969I6 547 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 NABP1Q96AH0 204 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 TUBGCP3Q96CW5 907 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 R3HDM4Q96D70 268 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 CMBLQ96DG6 245 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 WDFY2Q96P53 400 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 WNT5BQ9H1J7 359 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 TAS2R5Q9NYW4 299 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 ZDHHC8Q9ULC8 765 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 TMCC3Q9ULS5 477 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 PYCARDQ9ULZ3 195 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 UGT2A1Q9Y4X1 527 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 HERC2O95714 4834 aa4.32□□□□□ -1.72
PTPN4-209ENST00000469511 DNAH7Q8WXX0 4024 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 A0A096LPI6 279 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 LOC100996750A0A140TA64 210 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 A0A1B0GW55 424 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 P2RY10O00398 339 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 MLNRO43193 412 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 ITM2AO43736 263 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 OR2T1O43869 369 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 TRIM13O60858 407 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 SLC2A10O95528 541 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 CHEK2O96017 543 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 GASTP01350 101 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 OPN1SWP03999 348 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 THY1P04216 161 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 SHBGP04278 402 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 DUX4L2P0CJ85 424 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 DUX4L3P0CJ86 424 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 DUX4L4P0CJ87 422 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 DUX4L5P0CJ88 424 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 DUX4L6P0CJ89 424 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 DUX4L7P0CJ90 424 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 ADORA3P0DMS8 318 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 VSIG10L2P0DP72 767 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 GABRA5P31644 462 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 PSMB10P40306 273 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 UFM1P61960 85 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 HSF2Q03933 536 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 EMX2Q04743 252 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 PLP2Q04941 152 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 FMODQ06828 376 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 KLRD1Q13241 179 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 LY6EQ16553 131 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 ZNF404Q494X3 552 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 SLC36A2Q495M3 483 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 NRN1LQ496H8 165 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 LIN52Q52LA3 116 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 ALG10BQ5I7T1 473 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 CASC10Q5T4H9 136 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 RNF220Q5VTB9 566 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 DUX4L9Q6RFH8 374 aaPredicted RBP4.31□□□□□ -1.72
PTPN4-209ENST00000469511 GDPGP1Q6ZNW5 385 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 ZNF621Q6ZSS3 439 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 PXKQ7Z7A4 578 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 MOGAT3Q86VF5 341 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 LCA5Q86VQ0 697 aa4.31□□□□□ -1.72
PTPN4-209ENST00000469511 RANBP3LQ86VV4 465 aaPredicted RBP4.31□□□□□ -1.72
PTPN4-209ENST00000469511 C17orf53Q8N3J3 647 aaPredicted RBP4.31□□□□□ -1.72
PTPN4-209ENST00000469511 C10orf53Q8N6V4 93 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms