RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 KNTC1P50748 2209 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 CACNA1HO95180 2353 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 CACNA1CQ13936 2221 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 A0A0J9YW62 118 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 LOC100289279A0A1B0GTE1 492 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 A0A1B0GTH9 108 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 STMND1H3BQB6 276 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 ACOT7O00154 380 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 SULT1C2O00338 296 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 LDLRAD4O15165 306 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 EEF1E1O43324 174 aaKnown RBP6.75□□□□□ -1.33
COL6A3-208ENST00000468792 RAD1O60671 282 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 CCNKO75909 580 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 ALX3O95076 343 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 HPNP05981 417 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 HSD11B1P28845 292 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 SFTPDP35247 375 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 DLSTP36957 453 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 CASRP41180 1078 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 GUCA1AP43080 201 aaPredicted RBP6.75□□□□□ -1.33
COL6A3-208ENST00000468792 SOX2P48431 317 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 CSNK1A1P48729 337 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 EIF2B2P49770 351 aaKnown RBP6.75□□□□□ -1.33
COL6A3-208ENST00000468792 GFRA1P56159 465 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 TPTEP56180 551 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 RPS18P62269 152 aaKnown RBP6.75□□□□□ -1.33
COL6A3-208ENST00000468792 MRPS34P82930 218 aaKnown RBP6.75□□□□□ -1.33
COL6A3-208ENST00000468792 MFGE8Q08431 387 aaPredicted RBP6.75□□□□□ -1.33
COL6A3-208ENST00000468792 FOXO1Q12778 655 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 CAMK2DQ13557 499 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 KLF9Q13886 244 aaPredicted RBP6.75□□□□□ -1.33
COL6A3-208ENST00000468792 RAB11BQ15907 218 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 BCL2A1Q16548 175 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 HYAL4Q2M3T9 481 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 DCAF10Q5QP82 559 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 ELFN2Q5R3F8 820 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 PDSS1Q5T2R2 415 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 HES5Q5TA89 166 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 RIPPLY2Q5TAB7 128 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 BCL2L15Q5TBC7 163 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 ZNF57Q68EA5 555 aaPredicted RBP6.75□□□□□ -1.33
COL6A3-208ENST00000468792 ASPHD2Q6ICH7 369 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 SPATC1Q76KD6 591 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 GPAT4Q86UL3 456 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 GGNQ86UU5 652 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 LIX1LQ8IVB5 337 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 SERPINA12Q8IW75 414 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 C20orf196Q8IYI0 205 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 TOMM5Q8N4H5 51 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 ZIC4Q8N9L1 334 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 ZBTB8BQ8NAP8 495 aaPredicted RBP6.75□□□□□ -1.33
COL6A3-208ENST00000468792 GJC3Q8NFK1 279 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 OR51A4Q8NGJ6 313 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 OR10S1Q8NGN2 331 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 OR5M1Q8NGP8 315 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 OR2AJ1Q8NGZ0 328 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 OR10AC1Q8NH08 325 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 SYNPRQ8TBG9 265 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 TSEN15Q8WW01 171 aaKnown RBP6.75□□□□□ -1.33
COL6A3-208ENST00000468792 ITFG2Q969R8 447 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 SLC25A28Q96A46 364 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 C10orf35Q96D05 121 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 DNAJA3Q96EY1 480 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 FER1L6-AS2Q96M78 137 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 OR2M2Q96R28 347 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 FAM173AQ9BQD7 235 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 NUDT16L1Q9BRJ7 211 aaKnown RBP6.75□□□□□ -1.33
COL6A3-208ENST00000468792 UQCC2Q9BRT2 126 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 EMC6Q9BV81 110 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 SLC25A18Q9H1K4 315 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 DPAGT1Q9H3H5 408 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 NELFAQ9H3P2 528 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 TMEM185BQ9H7F4 350 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 PNRC2Q9NPJ4 139 aaKnown RBP6.75□□□□□ -1.33
COL6A3-208ENST00000468792 TAS2R8Q9NYW2 309 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 STMN3Q9NZ72 180 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 FOXJ2Q9P0K8 574 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 ZNF107Q9UII5 783 aaPredicted RBP6.75□□□□□ -1.33
COL6A3-208ENST00000468792 SLC22A13Q9Y226 551 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 EMC9Q9Y3B6 208 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 R4GN57 208 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 SDK2Q58EX2 2172 aa6.75□□□□□ -1.33
COL6A3-208ENST00000468792 PCNX2A6NKB5 2137 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 IGKV3D-15A0A087WSY6 115 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 A0A087WV48 116 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 A0A0U1RQV5 110 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 LOC107986453A0A1B0GWG9 222 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 C7orf66A4D0T2 115 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 NPIPA2E9PIF3 369 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 INMT-MINDY4F8WBC2 141 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 NPIPA3F8WFD2 350 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 DHHO43323 396 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 LANCL1O43813 399 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 RAMP1O60894 148 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 KRT33AO76009 404 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 SCGNO76038 276 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 NEURL1O76050 574 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 GLSO94925 669 aaPredicted RBP6.74□□□□□ -1.33
COL6A3-208ENST00000468792 DHFRP00374 187 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 IGLV3-1P01715 115 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms