RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 MMP15P51511 669 aa16.26■□□□□ 0.19
COL7A1-207ENST00000467985 MS4A2Q01362 244 aa16.26■□□□□ 0.19
COL7A1-207ENST00000467985 SPIBQ01892 262 aa16.26■□□□□ 0.19
COL7A1-207ENST00000467985 GLO1Q04760 184 aa16.26■□□□□ 0.19
COL7A1-207ENST00000467985 DNM1P34Q6PK57 102 aa16.26■□□□□ 0.19
COL7A1-207ENST00000467985 THSD4Q6ZMP0 1018 aa16.26■□□□□ 0.19
COL7A1-207ENST00000467985 SPATA24Q86W54 205 aa16.26■□□□□ 0.19
COL7A1-207ENST00000467985 COG8Q96MW5 612 aa16.26■□□□□ 0.19
COL7A1-207ENST00000467985 DIRC2Q96SL1 478 aa16.26■□□□□ 0.19
COL7A1-207ENST00000467985 EGLN1Q9GZT9 426 aa16.26■□□□□ 0.19
COL7A1-207ENST00000467985 TBCCD1Q9NVR7 557 aa16.26■□□□□ 0.19
COL7A1-207ENST00000467985 IL20RAQ9UHF4 553 aa16.26■□□□□ 0.19
COL7A1-207ENST00000467985 ZDHHC8Q9ULC8 765 aa16.26■□□□□ 0.19
COL7A1-207ENST00000467985 IER3IP1Q9Y5U9 82 aa16.26■□□□□ 0.19
COL7A1-207ENST00000467985 SOCS2O14508 198 aa16.25■□□□□ 0.19
COL7A1-207ENST00000467985 IMPA2O14732 288 aa16.25■□□□□ 0.19
COL7A1-207ENST00000467985 CDC14BO60729 498 aa16.25■□□□□ 0.19
COL7A1-207ENST00000467985 NGFP01138 241 aa16.25■□□□□ 0.19
COL7A1-207ENST00000467985 FABP3P05413 133 aa16.25■□□□□ 0.19
COL7A1-207ENST00000467985 ADH4P08319 380 aa16.25■□□□□ 0.19
COL7A1-207ENST00000467985 GSTM3P21266 225 aa16.25■□□□□ 0.19
COL7A1-207ENST00000467985 CRABP1P29762 137 aa16.25■□□□□ 0.19
COL7A1-207ENST00000467985 HTR5AP47898 357 aa16.25■□□□□ 0.19
COL7A1-207ENST00000467985 FXYD6P3P58550 94 aa16.25■□□□□ 0.19
COL7A1-207ENST00000467985 TSTQ16762 297 aaKnown RBP16.25■□□□□ 0.19
COL7A1-207ENST00000467985 HFEQ30201 348 aa16.25■□□□□ 0.19
COL7A1-207ENST00000467985 IL17RELQ6ZVW7 336 aa16.25■□□□□ 0.19
COL7A1-207ENST00000467985 GLCCI1Q86VQ1 547 aa16.25■□□□□ 0.19
COL7A1-207ENST00000467985 FANK1Q8TC84 345 aa16.25■□□□□ 0.19
COL7A1-207ENST00000467985 POP5Q969H6 163 aaKnown RBP16.25■□□□□ 0.19
COL7A1-207ENST00000467985 ELMOD3Q96FG2 381 aa16.25■□□□□ 0.19
COL7A1-207ENST00000467985 RERGLQ9H628 205 aa16.25■□□□□ 0.19
COL7A1-207ENST00000467985 NARFLQ9H6Q4 476 aa16.25■□□□□ 0.19
COL7A1-207ENST00000467985 IL1RAPQ9NPH3 570 aa16.25■□□□□ 0.19
COL7A1-207ENST00000467985 ATPIF1Q9UII2 106 aa16.25■□□□□ 0.19
COL7A1-207ENST00000467985 TMCC3Q9ULS5 477 aa16.25■□□□□ 0.19
COL7A1-207ENST00000467985 CLDN25C9JDP6 229 aa16.24■□□□□ 0.19
COL7A1-207ENST00000467985 FPR3P25089 353 aa16.24■□□□□ 0.19
COL7A1-207ENST00000467985 KCNMB1Q16558 191 aa16.24■□□□□ 0.19
COL7A1-207ENST00000467985 RFX4Q33E94 735 aa16.24■□□□□ 0.19
COL7A1-207ENST00000467985 USP51Q70EK9 711 aa16.24■□□□□ 0.19
COL7A1-207ENST00000467985 VASH1Q7L8A9 365 aaPredicted RBP16.24■□□□□ 0.19
COL7A1-207ENST00000467985 TIMD4Q96H15 378 aa16.24■□□□□ 0.19
COL7A1-207ENST00000467985 NUAK2Q9H093 628 aa16.24■□□□□ 0.19
COL7A1-207ENST00000467985 PLEK2Q9NYT0 353 aa16.24■□□□□ 0.19
COL7A1-207ENST00000467985 ASH2LQ9UBL3 628 aa16.24■□□□□ 0.19
COL7A1-207ENST00000467985 COA3Q9Y2R0 106 aaPredicted RBP16.24■□□□□ 0.19
COL7A1-207ENST00000467985 J3QW42 95 aa16.23■□□□□ 0.19
COL7A1-207ENST00000467985 ACOT8O14734 319 aa16.23■□□□□ 0.19
COL7A1-207ENST00000467985 ARPC3O15145 178 aa16.23■□□□□ 0.19
COL7A1-207ENST00000467985 SPRY3O43610 288 aa16.23■□□□□ 0.19
COL7A1-207ENST00000467985 OR10H3O60404 316 aa16.23■□□□□ 0.19
COL7A1-207ENST00000467985 IGHV1-46P01743 117 aa16.23■□□□□ 0.19
COL7A1-207ENST00000467985 ANPEPP15144 967 aa16.23■□□□□ 0.19
COL7A1-207ENST00000467985 SLC6A6P31641 620 aa16.23■□□□□ 0.19
COL7A1-207ENST00000467985 CDKN2AP42771 156 aaKnown RBP16.23■□□□□ 0.19
COL7A1-207ENST00000467985 ERFP50548 548 aa16.23■□□□□ 0.19
COL7A1-207ENST00000467985 LMO4P61968 165 aa16.23■□□□□ 0.19
COL7A1-207ENST00000467985 SLC3A1Q07837 685 aa16.23■□□□□ 0.19
COL7A1-207ENST00000467985 PTCHD4Q6ZW05 846 aa16.23■□□□□ 0.19
COL7A1-207ENST00000467985 JAZF1Q86VZ6 243 aa16.23■□□□□ 0.19
COL7A1-207ENST00000467985 OR51F2Q8NH61 342 aa16.23■□□□□ 0.19
COL7A1-207ENST00000467985 GTF3AQ92664 365 aaKnown RBP16.23■□□□□ 0.19
COL7A1-207ENST00000467985 RAB1CQ92928 201 aa16.23■□□□□ 0.19
COL7A1-207ENST00000467985 UTP4Q969X6 686 aaKnown RBP16.23■□□□□ 0.19
COL7A1-207ENST00000467985 ERMAPQ96PL5 475 aaPredicted RBP16.23■□□□□ 0.19
COL7A1-207ENST00000467985 GPA33Q99795 319 aa16.23■□□□□ 0.19
COL7A1-207ENST00000467985 TREM2Q9NZC2 230 aa16.23■□□□□ 0.19
COL7A1-207ENST00000467985 KLHL21Q9UJP4 597 aa16.23■□□□□ 0.19
COL7A1-207ENST00000467985 OR6C6A6NF89 314 aa16.22■□□□□ 0.19
COL7A1-207ENST00000467985 ZSCAN5BA6NJL1 495 aa16.22■□□□□ 0.19
COL7A1-207ENST00000467985 AQP12BA6NM10 295 aa16.22■□□□□ 0.19
COL7A1-207ENST00000467985 ANKRD65E5RJM6 399 aa16.22■□□□□ 0.19
COL7A1-207ENST00000467985 IDH3BO43837 385 aa16.22■□□□□ 0.19
COL7A1-207ENST00000467985 TIMM8AO60220 97 aaPredicted RBP16.22■□□□□ 0.19
COL7A1-207ENST00000467985 KRT36O76013 467 aa16.22■□□□□ 0.19
COL7A1-207ENST00000467985 MSMBP08118 114 aa16.22■□□□□ 0.19
COL7A1-207ENST00000467985 GAAP10253 952 aa16.22■□□□□ 0.19
COL7A1-207ENST00000467985 RRM2P31350 389 aa16.22■□□□□ 0.19
COL7A1-207ENST00000467985 SRP14P37108 136 aaKnown RBP16.22■□□□□ 0.19
COL7A1-207ENST00000467985 RGS6P49758 472 aa16.22■□□□□ 0.19
COL7A1-207ENST00000467985 FAM98BQ52LJ0 330 aaKnown RBP16.22■□□□□ 0.19
COL7A1-207ENST00000467985 ZDHHC21Q8IVQ6 265 aa16.22■□□□□ 0.19
COL7A1-207ENST00000467985 AQP12AQ8IXF9 295 aa16.22■□□□□ 0.19
COL7A1-207ENST00000467985 OR1F12Q8NHA8 337 aa16.22■□□□□ 0.19
COL7A1-207ENST00000467985 TMEM186Q96B77 213 aa16.22■□□□□ 0.19
COL7A1-207ENST00000467985 RAB39BQ96DA2 213 aa16.22■□□□□ 0.19
COL7A1-207ENST00000467985 DCLRE1CQ96SD1 692 aaKnown RBP16.22■□□□□ 0.19
COL7A1-207ENST00000467985 OR52D1Q9H346 318 aa16.22■□□□□ 0.19
COL7A1-207ENST00000467985 POLR1DQ9Y2S0 133 aa16.22■□□□□ 0.19
COL7A1-207ENST00000467985 GRIP1Q9Y3R0 1128 aa16.22■□□□□ 0.19
COL7A1-207ENST00000467985 WNT9BO14905 357 aa16.21■□□□□ 0.19
COL7A1-207ENST00000467985 PPP1R3DO95685 299 aa16.21■□□□□ 0.19
COL7A1-207ENST00000467985 RENP00797 406 aa16.21■□□□□ 0.19
COL7A1-207ENST00000467985 CD55P08174 381 aa16.21■□□□□ 0.19
COL7A1-207ENST00000467985 TNFSF4P23510 183 aa16.21■□□□□ 0.19
COL7A1-207ENST00000467985 NOS3P29474 1203 aa16.21■□□□□ 0.19
COL7A1-207ENST00000467985 GSSP48637 474 aa16.21■□□□□ 0.19
COL7A1-207ENST00000467985 MVKQ03426 396 aa16.21■□□□□ 0.19
COL7A1-207ENST00000467985 PSG7Q13046 419 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms