RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 UBASH3BQ8TF42 649 aa12.05□□□□□ -0.48
CCHCR1-211ENST00000467553 C1orf159Q96HA4 380 aa12.05□□□□□ -0.48
CCHCR1-211ENST00000467553 FEVQ99581 238 aa12.05□□□□□ -0.48
CCHCR1-211ENST00000467553 WACQ9BTA9 647 aa12.05□□□□□ -0.48
CCHCR1-211ENST00000467553 DGCR6LQ9BY27 220 aa12.05□□□□□ -0.48
CCHCR1-211ENST00000467553 BCL2L14Q9BZR8 327 aa12.05□□□□□ -0.48
CCHCR1-211ENST00000467553 TPK1Q9H3S4 243 aa12.05□□□□□ -0.48
CCHCR1-211ENST00000467553 TBC1D23Q9NUY8 699 aa12.05□□□□□ -0.48
CCHCR1-211ENST00000467553 PDP1Q9P0J1 537 aaPredicted RBP12.05□□□□□ -0.48
CCHCR1-211ENST00000467553 MYEF2Q9P2K5 600 aaKnown RBP12.05□□□□□ -0.48
CCHCR1-211ENST00000467553 REV1Q9UBZ9 1251 aa12.05□□□□□ -0.48
CCHCR1-211ENST00000467553 POLR1DQ9Y2S0 133 aa12.05□□□□□ -0.48
CCHCR1-211ENST00000467553 A0A1W2PPW3 197 aa12.04□□□□□ -0.48
CCHCR1-211ENST00000467553 BHLHE40O14503 412 aa12.04□□□□□ -0.48
CCHCR1-211ENST00000467553 SGCEO43556 437 aa12.04□□□□□ -0.48
CCHCR1-211ENST00000467553 FKBP6O75344 327 aa12.04□□□□□ -0.48
CCHCR1-211ENST00000467553 HLA-DQA2P01906 255 aa12.04□□□□□ -0.48
CCHCR1-211ENST00000467553 HOXB6P17509 224 aaKnown RBP12.04□□□□□ -0.48
CCHCR1-211ENST00000467553 WNT5AP41221 380 aa12.04□□□□□ -0.48
CCHCR1-211ENST00000467553 HTR5AP47898 357 aa12.04□□□□□ -0.48
CCHCR1-211ENST00000467553 LSM6P62312 80 aaKnown RBP12.04□□□□□ -0.48
CCHCR1-211ENST00000467553 SCRN3Q0VDG4 424 aa12.04□□□□□ -0.48
CCHCR1-211ENST00000467553 MEP1BQ16820 701 aa12.04□□□□□ -0.48
CCHCR1-211ENST00000467553 LIPNQ5VXI9 398 aa12.04□□□□□ -0.48
CCHCR1-211ENST00000467553 LINC01356Q8N9X3 169 aa12.04□□□□□ -0.48
CCHCR1-211ENST00000467553 CYB561A3Q8NBI2 242 aa12.04□□□□□ -0.48
CCHCR1-211ENST00000467553 NPEPL1Q8NDH3 523 aa12.04□□□□□ -0.48
CCHCR1-211ENST00000467553 SNX18Q96RF0 628 aa12.04□□□□□ -0.48
CCHCR1-211ENST00000467553 NIPSNAP1Q9BPW8 284 aa12.04□□□□□ -0.48
CCHCR1-211ENST00000467553 CHODLQ9H9P2 273 aa12.04□□□□□ -0.48
CCHCR1-211ENST00000467553 PLEK2Q9NYT0 353 aa12.04□□□□□ -0.48
CCHCR1-211ENST00000467553 TAAR3PQ9P1P4 343 aa12.04□□□□□ -0.48
CCHCR1-211ENST00000467553 ASH2LQ9UBL3 628 aa12.04□□□□□ -0.48
CCHCR1-211ENST00000467553 IGLV1-36A0A0B4J1U3 117 aa12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 M0R233 179 aa12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 DOK2O60496 412 aa12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 PRKACGP22612 351 aa12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 KLF3P57682 345 aaPredicted RBP12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 MRPS11P82912 194 aaKnown RBP12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 COX10Q12887 443 aa12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 AQP6Q13520 282 aa12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 RIN1Q13671 783 aa12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 GK3PQ14409 553 aa12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 KCNMB1Q16558 191 aa12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 NKPD1Q17RQ9 610 aa12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 ZNF718Q3SXZ3 478 aa12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 SPATA46Q5T0L3 261 aa12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 UNQ6126/PRO20091Q6UXV3 157 aa12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 RFLNBQ8N5W9 214 aa12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 PAPD5Q8NDF8 572 aaKnown RBP12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 ABHD4Q8TB40 342 aa12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 SLCO4A1Q96BD0 722 aa12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 C4orf45Q96LM5 186 aa12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 CDADC1Q9BWV3 514 aa12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 ELOVL3Q9HB03 270 aa12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 ARMC1Q9NVT9 282 aa12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 DNAJB9Q9UBS3 223 aa12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 NDRG4Q9ULP0 352 aaKnown RBP12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 GRIP1Q9Y3R0 1128 aa12.03□□□□□ -0.48
CCHCR1-211ENST00000467553 H3BN98 237 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 RER1O15258 196 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 LILRA1O75019 489 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 TIPRLO75663 272 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 NGFP01138 241 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 TFP02787 698 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 COX5BP10606 129 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 NAT2P11245 290 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 ZNF250P15622 560 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 POU1F1P28069 291 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 GCH1P30793 250 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 PYCR1P32322 319 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 ARHGDIAP52565 204 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 PPP1CBP62140 327 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 TEKQ02763 1124 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 GLO1Q04760 184 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 SLC36A3Q495N2 470 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 CCDC92Q53HC0 331 aaPredicted RBP12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 ZNF362Q5T0B9 420 aaPredicted RBP12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 C1orf146Q5VVC0 180 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 CORO6Q6QEF8 472 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 ARL9Q6T311 187 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 CD300LDQ6UXZ3 194 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 VASH1Q7L8A9 365 aaPredicted RBP12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 ZBTB46Q86UZ6 589 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 ZNF101Q8IZC7 436 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 HS3ST5Q8IZT8 346 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 LNX2Q8N448 690 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 SLC37A3Q8NCC5 494 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 PROKR2Q8NFJ6 384 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 GJC3Q8NFK1 279 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 OR2T33Q8NG76 320 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 OR4Q3Q8NH05 313 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 SLC25A40Q8TBP6 338 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 TEX47Q8TBZ9 253 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 SLC7A6Q92536 515 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 OR2J1Q9GZK6 312 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 RACGAP1Q9H0H5 632 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 MMADHCQ9H3L0 296 aaPredicted RBP12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 ZNF556Q9HAH1 456 aa12.02□□□□□ -0.49
CCHCR1-211ENST00000467553 GPR160Q9UJ42 338 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms