RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 SYNGR3O43761 229 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 SLC43A1O75387 559 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 PPP1R3DO95685 299 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 LYNX1P0DP58 116 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 ZNF43P17038 809 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 EGR1P18146 543 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 NR4A1P22736 598 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 SDHAP31040 664 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 CLDN17P56750 224 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 CTXN1P60606 82 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 CXCR4P61073 352 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 ACTG1P63261 375 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 CSNK2BP67870 215 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 CD47Q08722 323 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 SNAPC1Q16533 368 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 OCLNQ16625 522 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 ZNF362Q5T0B9 420 aaPredicted RBP13.5□□□□□ -0.25
TSSC4-208ENST00000467308 KRT80Q6KB66 452 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 USP43Q70EL4 1123 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 MDP1Q86V88 176 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 C3orf56Q8N813 242 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 TMEM163Q8TC26 289 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 FAM216AQ8WUB2 273 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 MRPL24Q96A35 216 aaKnown RBP13.5□□□□□ -0.25
TSSC4-208ENST00000467308 RACGAP1Q9H0H5 632 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 TXNIPQ9H3M7 391 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 TPK1Q9H3S4 243 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 MS4A5Q9H3V2 200 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 CRLF2Q9HC73 371 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 GPR35Q9HC97 309 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 HIF1ANQ9NWT6 349 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 IL20RAQ9UHF4 553 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 GRIP1Q9Y3R0 1128 aa13.5□□□□□ -0.25
TSSC4-208ENST00000467308 A0A1W2PRG6 482 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 TMEM89A2RUT3 159 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 ZNF503-AS2A6NEH8 195 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 RIIAD1A6NNX1 92 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 FAM157AC9JC47 383 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 M0R233 179 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 M0R3G1 203 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 AHCYL1O43865 530 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 IFNGP01579 166 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 TFP02787 698 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 MSMBP08118 114 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 DAP3P51398 398 aaKnown RBP13.49□□□□□ -0.25
TSSC4-208ENST00000467308 RPL27P61353 136 aaKnown RBP13.49□□□□□ -0.25
TSSC4-208ENST00000467308 IL5RAQ01344 420 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 CDK5R2Q13319 367 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 ELFN2Q5R3F8 820 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 MEDAGQ5VYS4 303 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 PTCHD4Q6ZW05 846 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 HDDC2Q7Z4H3 204 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 ADCK1Q86TW2 530 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 GPR137CQ8N3F9 429 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 CLDND2Q8NHS1 167 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 ZNF519Q8TB69 540 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 GCDHQ92947 438 aaPredicted RBP13.49□□□□□ -0.25
TSSC4-208ENST00000467308 ZNF566Q969W8 418 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 Q96MT0 163 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 ERMAPQ96PL5 475 aaPredicted RBP13.49□□□□□ -0.25
TSSC4-208ENST00000467308 DDOQ99489 341 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 TVP23BQ9NYZ1 205 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 IER3IP1Q9Y5U9 82 aa13.49□□□□□ -0.25
TSSC4-208ENST00000467308 A6NIZ1 184 aa13.48□□□□□ -0.25
TSSC4-208ENST00000467308 ZNF99A8MXY4 864 aaPredicted RBP13.48□□□□□ -0.25
TSSC4-208ENST00000467308 PRKYO43930 277 aa13.48□□□□□ -0.25
TSSC4-208ENST00000467308 WBP4O75554 376 aaKnown RBP13.48□□□□□ -0.25
TSSC4-208ENST00000467308 F13BP05160 661 aa13.48□□□□□ -0.25
TSSC4-208ENST00000467308 ACHEP22303 614 aa13.48□□□□□ -0.25
TSSC4-208ENST00000467308 NOS3P29474 1203 aa13.48□□□□□ -0.25
TSSC4-208ENST00000467308 GPR6P46095 362 aaPredicted RBP13.48□□□□□ -0.25
TSSC4-208ENST00000467308 HILS1P60008 231 aa13.48□□□□□ -0.25
TSSC4-208ENST00000467308 RAP1BP61224 184 aa13.48□□□□□ -0.25
TSSC4-208ENST00000467308 RAP1AP62834 184 aa13.48□□□□□ -0.25
TSSC4-208ENST00000467308 ERVK-25P63136 954 aa13.48□□□□□ -0.25
TSSC4-208ENST00000467308 MRPS11P82912 194 aaKnown RBP13.48□□□□□ -0.25
TSSC4-208ENST00000467308 CEACAM16Q2WEN9 425 aa13.48□□□□□ -0.25
TSSC4-208ENST00000467308 C6orf141Q5SZD1 244 aa13.48□□□□□ -0.25
TSSC4-208ENST00000467308 ARMC4Q5T2S8 1044 aa13.48□□□□□ -0.25
TSSC4-208ENST00000467308 UEVLDQ8IX04 471 aa13.48□□□□□ -0.25
TSSC4-208ENST00000467308 KDM8Q8N371 416 aa13.48□□□□□ -0.25
TSSC4-208ENST00000467308 TEX29Q8N6K0 151 aa13.48□□□□□ -0.25
TSSC4-208ENST00000467308 OR51F2Q8NH61 342 aa13.48□□□□□ -0.25
TSSC4-208ENST00000467308 APH1BQ8WW43 257 aa13.48□□□□□ -0.25
TSSC4-208ENST00000467308 HDAC2Q92769 488 aaKnown RBP13.48□□□□□ -0.25
TSSC4-208ENST00000467308 RDH5Q92781 318 aa13.48□□□□□ -0.25
TSSC4-208ENST00000467308 ZNF837Q96EG3 531 aaPredicted RBP13.48□□□□□ -0.25
TSSC4-208ENST00000467308 PLEKHA8Q96JA3 519 aa13.48□□□□□ -0.25
TSSC4-208ENST00000467308 TSPAN32Q96QS1 320 aa13.48□□□□□ -0.25
TSSC4-208ENST00000467308 MRPL37Q9BZE1 423 aaKnown RBP13.48□□□□□ -0.25
TSSC4-208ENST00000467308 PLCXD1Q9NUJ7 323 aa13.48□□□□□ -0.25
TSSC4-208ENST00000467308 GRHPRQ9UBQ7 328 aa13.48□□□□□ -0.25
TSSC4-208ENST00000467308 PCDHB10Q9UN67 800 aa13.48□□□□□ -0.25
TSSC4-208ENST00000467308 ADAM18Q9Y3Q7 739 aa13.48□□□□□ -0.25
TSSC4-208ENST00000467308 CENPBD1B2RD01 187 aa13.47□□□□□ -0.25
TSSC4-208ENST00000467308 C11orf98E9PRG8 122 aa13.47□□□□□ -0.25
TSSC4-208ENST00000467308 TRIM77I1YAP6 450 aa13.47□□□□□ -0.25
TSSC4-208ENST00000467308 TRAF3IP2O43734 574 aaPredicted RBP13.47□□□□□ -0.25
TSSC4-208ENST00000467308 CCDC159P0C7I6 412 aa13.47□□□□□ -0.25
TSSC4-208ENST00000467308 HIST1H1CP16403 213 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms