RNA–Protein interactions for RNA: ENST00000467080.1

RBM17-208, Transcript of RNA binding motif protein 17, human

TSL 2

Gene RBM17, Length 837 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM17-208	ENST00000467080	SMIM10	Q96HG1	83 aa		4.24	□□□□□ -1.73
RBM17-208	ENST00000467080	CXorf58	Q96LI9	332 aa		4.24	□□□□□ -1.73
RBM17-208	ENST00000467080	C19orf43	Q9BQ61	176 aa		4.24	□□□□□ -1.73
RBM17-208	ENST00000467080	CCDC77	Q9BR77	488 aa		4.24	□□□□□ -1.73
RBM17-208	ENST00000467080	ANP32E	Q9BTT0	268 aa		4.24	□□□□□ -1.73
RBM17-208	ENST00000467080	MED18	Q9BUE0	208 aa		4.24	□□□□□ -1.73
RBM17-208	ENST00000467080	PAPOLG	Q9BWT3	736 aa	Known RBP	4.24	□□□□□ -1.73
RBM17-208	ENST00000467080	OR8D2	Q9GZM6	311 aa		4.24	□□□□□ -1.73
RBM17-208	ENST00000467080	CENPM	Q9NSP4	180 aa		4.24	□□□□□ -1.73
RBM17-208	ENST00000467080	TECR	Q9NZ01	308 aa	Known RBP	4.24	□□□□□ -1.73
RBM17-208	ENST00000467080	UVRAG	Q9P2Y5	699 aa		4.24	□□□□□ -1.73
RBM17-208	ENST00000467080	ERVK-18	Q9QC07	812 aa		4.24	□□□□□ -1.73
RBM17-208	ENST00000467080	EXTL2	Q9UBQ6	330 aa		4.24	□□□□□ -1.73
RBM17-208	ENST00000467080	DIMT1	Q9UNQ2	313 aa	Known RBP	4.24	□□□□□ -1.73
RBM17-208	ENST00000467080	MRPS18C	Q9Y3D5	142 aa	Known RBP	4.24	□□□□□ -1.73
RBM17-208	ENST00000467080	SLC22A7	Q9Y694	548 aa		4.24	□□□□□ -1.73
RBM17-208	ENST00000467080	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	4.24	□□□□□ -1.73
RBM17-208	ENST00000467080	C17orf51	A8MQB3	221 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	KRTAP9-6	A8MVA2	160 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	SHISA9	B4DS77	424 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080		B4DXG7	233 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	APOC4-APOC2	K7ER74	178 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	SIGLEC5	O15389	551 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	OR1F1	O43749	312 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	TRIM3	O75382	744 aa	Predicted RBP	4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	TRAPPC6A	O75865	159 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	RCBTB2	O95199	551 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	VENTX	O95231	258 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	CD8A	P01732	235 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	APOC2	P02655	101 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	C1QA	P02745	245 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	RNH1	P13489	461 aa	Known RBP	4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	GPX3	P22352	226 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	GLRA1	P23415	457 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	UGT2B10	P36537	528 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	CD79B	P40259	229 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	CDK9	P50750	372 aa	Known RBP	4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	EIF3E	P60228	445 aa	Known RBP	4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	RPS4X	P62701	263 aa	Known RBP	4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	HSF2	Q03933	536 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	FUT7	Q11130	342 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	PRPSAP1	Q14558	356 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	ARHGAP19	Q14CB8	494 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	AGK	Q53H12	422 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	PIGG	Q5H8A4	983 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	LIPJ	Q5W064	366 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	ADNP2	Q6IQ32	1131 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	HSDL2	Q6YN16	418 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	CYHR1	Q6ZMK1	362 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	RNF130	Q86XS8	419 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	MISP	Q8IVT2	679 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	OR4N5	Q8IXE1	308 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	DND1	Q8IYX4	353 aa	Known RBP	4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	PRELID2	Q8N945	189 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	NT5C	Q8TCD5	201 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	SPPL2A	Q8TCT8	520 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	ZNF721	Q8TF20	911 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	THRSP	Q92748	146 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	TMEM45B	Q96B21	275 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	FOPNL	Q96NB1	174 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	OR4K3	Q96R72	315 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	SFXN3	Q9BWM7	321 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	ACTR8	Q9H981	624 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	C3orf14	Q9HBI5	128 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	ADAP2	Q9NPF8	381 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	IL1RAP	Q9NPH3	570 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	CHRAC1	Q9NRG0	131 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	PRTFDC1	Q9NRG1	225 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	SLC7A10	Q9NS82	523 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	CLCF1	Q9UBD9	225 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	LAMP5	Q9UJQ1	280 aa		4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	ZNF490	Q9ULM2	529 aa	Predicted RBP	4.23	□□□□□ -1.73
RBM17-208	ENST00000467080	HEATR1	Q9H583	2144 aa	Known RBP	4.22	□□□□□ -1.73
RBM17-208	ENST00000467080	WASHC1	A8K0Z3	465 aa		4.22	□□□□□ -1.73
RBM17-208	ENST00000467080		H0YC42	278 aa		4.22	□□□□□ -1.73
RBM17-208	ENST00000467080	SPOP	O43791	374 aa		4.22	□□□□□ -1.73
RBM17-208	ENST00000467080	LANCL1	O43813	399 aa		4.22	□□□□□ -1.73
RBM17-208	ENST00000467080	LY6H	O94772	140 aa		4.22	□□□□□ -1.73
RBM17-208	ENST00000467080	CAT	P04040	527 aa	Known RBP	4.22	□□□□□ -1.73
RBM17-208	ENST00000467080	CLPS	P04118	112 aa		4.22	□□□□□ -1.73
RBM17-208	ENST00000467080	GYPC	P04921	128 aa		4.22	□□□□□ -1.73
RBM17-208	ENST00000467080	IFNA16	P05015	189 aa		4.22	□□□□□ -1.73
RBM17-208	ENST00000467080	HPN	P05981	417 aa		4.22	□□□□□ -1.73
RBM17-208	ENST00000467080	SLC35G6	P0C7Q6	338 aa		4.22	□□□□□ -1.73
RBM17-208	ENST00000467080	CALCB	P10092	127 aa		4.22	□□□□□ -1.73
RBM17-208	ENST00000467080	RRAS	P10301	218 aa		4.22	□□□□□ -1.73
RBM17-208	ENST00000467080	GP9	P14770	177 aa		4.22	□□□□□ -1.73
RBM17-208	ENST00000467080	POU2F1	P14859	743 aa		4.22	□□□□□ -1.73
RBM17-208	ENST00000467080	RPS3	P23396	243 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
RBM17-208	ENST00000467080	PRDX2	P32119	198 aa		4.22	□□□□□ -1.73
RBM17-208	ENST00000467080	SOX6	P35712	828 aa		4.22	□□□□□ -1.73
RBM17-208	ENST00000467080	FEN1	P39748	380 aa	Known RBP	4.22	□□□□□ -1.73
RBM17-208	ENST00000467080	ATP4B	P51164	291 aa		4.22	□□□□□ -1.73
RBM17-208	ENST00000467080	NDUFV3	P56181	108 aa	Known RBP	4.22	□□□□□ -1.73
RBM17-208	ENST00000467080	FBXW4	P57775	412 aa		4.22	□□□□□ -1.73
RBM17-208	ENST00000467080	BTN3A2	P78410	334 aa		4.22	□□□□□ -1.73
RBM17-208	ENST00000467080	CDKL1	Q00532	357 aa		4.22	□□□□□ -1.73
RBM17-208	ENST00000467080	PARP6	Q2NL67	630 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms