RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 STAC2Q6ZMT1 411 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 C16orf47Q6ZP98 133 aaPredicted RBP2.21□□□□□ -2.06
XRN1-206ENST00000467077 NDUFAF7Q7L592 441 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 NT5DC3Q86UY8 548 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 PRSS58Q8IYP2 241 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 LILRB4Q8NHJ6 448 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 BRSK1Q8TDC3 778 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 ADAMTS16Q8TE57 1224 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 NAT14Q8WUY8 206 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 RNF138Q8WVD3 245 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 TMEM158Q8WZ71 300 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.21□□□□□ -2.06
XRN1-206ENST00000467077 VPS35Q96QK1 796 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 LYSMD1Q96S90 227 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 PEBP4Q96S96 227 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 NRTNQ99748 197 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 DPH7Q9BTV6 452 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 SNRNP25Q9BV90 132 aaKnown RBP2.21□□□□□ -2.06
XRN1-206ENST00000467077 MRPL13Q9BYD1 178 aaKnown RBP2.21□□□□□ -2.06
XRN1-206ENST00000467077 HES7Q9BYE0 225 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 SLC25A51Q9H1U9 297 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 XKR8Q9H6D3 395 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 LIN28AQ9H9Z2 209 aaKnown RBP2.21□□□□□ -2.06
XRN1-206ENST00000467077 POLE3Q9NRF9 147 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 CYTL1Q9NRR1 136 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 RBM22Q9NW64 420 aaKnown RBP eCLIP2.21□□□□□ -2.06
XRN1-206ENST00000467077 CTSFQ9UBX1 484 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 NXT1Q9UKK6 140 aaKnown RBP2.21□□□□□ -2.06
XRN1-206ENST00000467077 RPL26L1Q9UNX3 145 aaKnown RBP2.21□□□□□ -2.06
XRN1-206ENST00000467077 CHMP2BQ9UQN3 213 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 RNF6Q9Y252 685 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 EIF3LQ9Y262 564 aaKnown RBP2.21□□□□□ -2.06
XRN1-206ENST00000467077 GMPPBQ9Y5P6 360 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 HEBP2Q9Y5Z4 205 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 AP4B1Q9Y6B7 739 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 U3KQV3 271 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 ABCA2Q9BZC7 2435 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 NCKAP5O14513 1909 aa2.21□□□□□ -2.06
XRN1-206ENST00000467077 FLNAP21333 2647 aaKnown RBP2.21□□□□□ -2.06
XRN1-206ENST00000467077 INTS1Q8N201 2190 aaKnown RBP2.2□□□□□ -2.06
XRN1-206ENST00000467077 HEATR5AQ86XA9 2040 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 SCN3AQ9NY46 2000 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 IGHV1-45A0A0A0MS14 117 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 PINLYPA6NC86 204 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 GOLGA6L4A6NEF3 574 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 FAM74A7A6NL05 159 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 USP27XA6NNY8 438 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 CDC40O60508 579 aaKnown RBP eCLIP2.2□□□□□ -2.06
XRN1-206ENST00000467077 UGT1A9O60656 530 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 SMPD2O60906 423 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 MBD3O95983 291 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 IFNB1P01574 187 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 IGHV3-23P01764 117 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 HLA-DQB2P05538 268 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 SERPINA7P05543 415 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 HEXBP07686 556 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 COX6A1P12074 109 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 ANXA3P12429 323 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 ICAM2P13598 275 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 NCF1P14598 390 aaPredicted RBP2.2□□□□□ -2.06
XRN1-206ENST00000467077 UCHL3P15374 230 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 UGT2B7P16662 529 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 ZNF24P17028 368 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 MDKP21741 143 aaPredicted RBP2.2□□□□□ -2.06
XRN1-206ENST00000467077 PTBP1P26599 531 aaKnown RBP eCLIP2.2□□□□□ -2.06
XRN1-206ENST00000467077 MIPP30301 263 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 SHMT2P34897 504 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 MDH1P40925 334 aaKnown RBP2.2□□□□□ -2.06
XRN1-206ENST00000467077 GABRA4P48169 554 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 HCAR3P49019 387 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 EMP2P54851 167 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 DIO3P55073 304 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 OGDHQ02218 1023 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 OC90Q02509 493 aaPredicted RBP2.2□□□□□ -2.06
XRN1-206ENST00000467077 TPD52L1Q16890 204 aaPredicted RBP2.2□□□□□ -2.06
XRN1-206ENST00000467077 FAM74A3Q4VXF1 159 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 HSP90AA4PQ58FG1 418 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 ZNF311Q5JNZ3 666 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 LRRC8BQ6P9F7 803 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 SPESP1Q6UW49 350 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 FAM151BQ6UXP7 276 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 TFAP2EQ6VUC0 442 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 CENPUQ71F23 418 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 COX15Q7KZN9 410 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 MOB1BQ7L9L4 216 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 NLRP9Q7RTR0 991 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 PAQR7Q86WK9 346 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 PHF13Q86YI8 300 aaPredicted RBP2.2□□□□□ -2.06
XRN1-206ENST00000467077 PSTKQ8IV42 348 aaKnown RBP2.2□□□□□ -2.06
XRN1-206ENST00000467077 C9orf40Q8IXQ3 194 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 MCOLN2Q8IZK6 566 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 BPIFB2Q8N4F0 458 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 CSNK1A1LQ8N752 337 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 OR5AU1Q8NGC0 362 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 FAM57AQ8TBR7 257 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 PSMF1Q92530 271 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 C16orf45Q96MC5 204 aaPredicted RBP2.2□□□□□ -2.06
XRN1-206ENST00000467077 CSPG4P5Q96PW8 444 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 UTP23Q9BRU9 249 aaKnown RBP2.2□□□□□ -2.06
XRN1-206ENST00000467077 DPH5Q9H2P9 285 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms