RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 GALNT11Q8NCW6 608 aa17.31■□□□□ 0.36
LIMS2-212ENST00000466410 SCARB1Q8WTV0 552 aa17.31■□□□□ 0.36
LIMS2-212ENST00000466410 CENPMQ9NSP4 180 aa17.31■□□□□ 0.36
LIMS2-212ENST00000466410 MED11Q9P086 117 aa17.31■□□□□ 0.36
LIMS2-212ENST00000466410 SUSD2Q9UGT4 822 aa17.31■□□□□ 0.36
LIMS2-212ENST00000466410 MEGF11A6BM72 1044 aa17.31■□□□□ 0.36
LIMS2-212ENST00000466410 TMEM235A6NFC5 223 aa17.31■□□□□ 0.36
LIMS2-212ENST00000466410 NPIPA5E9PKD4 350 aa17.31■□□□□ 0.36
LIMS2-212ENST00000466410 H3BUI4 141 aa17.31■□□□□ 0.36
LIMS2-212ENST00000466410 P2RY10O00398 339 aa17.31■□□□□ 0.36
LIMS2-212ENST00000466410 EIF1AYO14602 144 aaKnown RBP17.31■□□□□ 0.36
LIMS2-212ENST00000466410 PIAS2O75928 621 aa17.31■□□□□ 0.36
LIMS2-212ENST00000466410 ISG15P05161 165 aa17.31■□□□□ 0.36
LIMS2-212ENST00000466410 ZNF735P0CB33 412 aa17.31■□□□□ 0.36
LIMS2-212ENST00000466410 ZNF28P17035 718 aa17.31■□□□□ 0.36
LIMS2-212ENST00000466410 ACHEP22303 614 aa17.31■□□□□ 0.36
LIMS2-212ENST00000466410 LY6G6FQ5SQ64 297 aa17.31■□□□□ 0.36
LIMS2-212ENST00000466410 LINC00052Q96N35 136 aa17.31■□□□□ 0.36
LIMS2-212ENST00000466410 SCPEP1Q9HB40 452 aa17.31■□□□□ 0.36
LIMS2-212ENST00000466410 UPB1Q9UBR1 384 aa17.31■□□□□ 0.36
LIMS2-212ENST00000466410 KLK13Q9UKR3 277 aa17.31■□□□□ 0.36
LIMS2-212ENST00000466410 NPIPA1Q9UND3 350 aa17.31■□□□□ 0.36
LIMS2-212ENST00000466410 FARSAQ9Y285 508 aaKnown RBP17.31■□□□□ 0.36
LIMS2-212ENST00000466410 PMS2P2O95744 297 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 CYB5AP00167 134 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 GMFBP60983 142 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 POU3F1Q03052 451 aaPredicted RBP17.3■□□□□ 0.36
LIMS2-212ENST00000466410 C1orf100Q5SVJ3 147 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 LYPD6Q86Y78 171 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 C12orf45Q8N5I9 185 aaPredicted RBP17.3■□□□□ 0.36
LIMS2-212ENST00000466410 ACBD4Q8NC06 268 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 OR4S1Q8NGB4 309 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 CCDC107Q8WV48 283 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 TMEM234Q8WY98 164 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 NKD1Q969G9 470 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 DMRTA2Q96SC8 542 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 KCNK17Q96T54 332 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 SLC22A11Q9NSA0 550 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 FGF21Q9NSA1 209 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 ZNF230Q9UIE0 474 aaPredicted RBP17.3■□□□□ 0.36
LIMS2-212ENST00000466410 VDAC3Q9Y277 283 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 A6NIZ1 184 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 ZNF736B4DX44 427 aaPredicted RBP17.3■□□□□ 0.36
LIMS2-212ENST00000466410 TEX46H3BTG2 121 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 RAP1BP61224 184 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 RAP1AP62834 184 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 PCK2Q16822 640 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 ATPAF1Q5TC12 328 aaPredicted RBP17.3■□□□□ 0.36
LIMS2-212ENST00000466410 C5orf46Q6UWT4 87 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 ARSKQ6UWY0 536 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 C17orf107Q6ZR85 190 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 SLC25A21Q9BQT8 299 aaPredicted RBP17.3■□□□□ 0.36
LIMS2-212ENST00000466410 B3GNT4Q9C0J1 378 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 MFFQ9GZY8 342 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 TTYH1Q9H313 450 aaPredicted RBP17.3■□□□□ 0.36
LIMS2-212ENST00000466410 FBXO4Q9UKT5 387 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 RHBDD3Q9Y3P4 386 aa17.3■□□□□ 0.36
LIMS2-212ENST00000466410 LOC390937A0A1W2PQ73 354 aa17.29■□□□□ 0.36
LIMS2-212ENST00000466410 WIPF3A6NGB9 483 aa17.29■□□□□ 0.36
LIMS2-212ENST00000466410 SMAD9O15198 467 aaKnown RBP17.29■□□□□ 0.36
LIMS2-212ENST00000466410 DUX1O43812 170 aa17.29■□□□□ 0.36
LIMS2-212ENST00000466410 CSN2P05814 226 aa17.29■□□□□ 0.36
LIMS2-212ENST00000466410 CALCRP30988 508 aa17.29■□□□□ 0.36
LIMS2-212ENST00000466410 GK2Q14410 553 aaPredicted RBP17.29■□□□□ 0.36
LIMS2-212ENST00000466410 SCGB2B2Q4G0G5 96 aa17.29■□□□□ 0.36
LIMS2-212ENST00000466410 ZNF704Q6ZNC4 412 aaPredicted RBP17.29■□□□□ 0.36
LIMS2-212ENST00000466410 H1FNTQ75WM6 255 aaPredicted RBP17.29■□□□□ 0.36
LIMS2-212ENST00000466410 OR1J2Q8NGS2 313 aa17.29■□□□□ 0.36
LIMS2-212ENST00000466410 SLC6A7Q99884 636 aa17.29■□□□□ 0.36
LIMS2-212ENST00000466410 CA14Q9ULX7 337 aa17.29■□□□□ 0.36
LIMS2-212ENST00000466410 TRAV14DV4A0A0A6YYC5 116 aa17.29■□□□□ 0.36
LIMS2-212ENST00000466410 SHISA8B8ZZ34 492 aa17.29■□□□□ 0.36
LIMS2-212ENST00000466410 ZP4Q12836 540 aa17.29■□□□□ 0.36
LIMS2-212ENST00000466410 ZNF660Q6AZW8 331 aaPredicted RBP17.29■□□□□ 0.36
LIMS2-212ENST00000466410 BPIFB2Q8N4F0 458 aa17.29■□□□□ 0.36
LIMS2-212ENST00000466410 PLPP5Q8NEB5 264 aa17.29■□□□□ 0.36
LIMS2-212ENST00000466410 ZNF501Q96CX3 271 aaPredicted RBP17.29■□□□□ 0.36
LIMS2-212ENST00000466410 NUDT21O43809 227 aaKnown RBP17.28■□□□□ 0.36
LIMS2-212ENST00000466410 H2BFMP0C1H6 154 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 DAP3P51398 398 aaKnown RBP17.28■□□□□ 0.36
LIMS2-212ENST00000466410 HSF1Q00613 529 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 TLE3Q04726 772 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 TMEM244Q5VVB8 128 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 DNM1P34Q6PK57 102 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 COX15Q7KZN9 410 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 NAXDQ8IW45 347 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 OR13C8Q8NGS7 320 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 MFSD8Q8NHS3 518 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 FGGYQ96C11 551 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 CMBLQ96DG6 245 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 EMC6Q9BV81 110 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 SLCO5A1Q9H2Y9 848 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 GDF2Q9UK05 429 aaPredicted RBP17.28■□□□□ 0.36
LIMS2-212ENST00000466410 FBXL2Q9UKC9 423 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 HRH3Q9Y5N1 445 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 ANKUB1A6NFN9 424 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 CCDC85CA6NKD9 419 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 CD74P04233 296 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 RPA2P15927 270 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 EIF1AXP47813 144 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms