RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 NKX3-1Q99801 234 aaPredicted RBP4.73□□□□□ -1.65
NCL-208ENST00000466274 KCNN2Q9H2S1 579 aa4.73□□□□□ -1.65
NCL-208ENST00000466274 REEP4Q9H6H4 257 aa4.73□□□□□ -1.65
NCL-208ENST00000466274 NANSQ9NR45 359 aa4.73□□□□□ -1.65
NCL-208ENST00000466274 ZNF224Q9NZL3 707 aa4.73□□□□□ -1.65
NCL-208ENST00000466274 GUCA1BQ9UMX6 200 aa4.73□□□□□ -1.65
NCL-208ENST00000466274 POLR3HQ9Y535 204 aaPredicted RBP4.73□□□□□ -1.65
NCL-208ENST00000466274 KPTNQ9Y664 436 aa4.73□□□□□ -1.65
NCL-208ENST00000466274 KCNE3Q9Y6H6 103 aa4.73□□□□□ -1.65
NCL-208ENST00000466274 LOC102725191A0A1B0GVB3 256 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 TCRBV4S1A1TA0A5B7 111 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 CFAP73A6NFT4 308 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 AIM2O14862 343 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 NPFFO15130 113 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 OR2T1O43869 369 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 FCMRO60667 390 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 PATE4P0C8F1 98 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 PNMTP11086 282 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 GSTM3P21266 225 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 TUBG1P23258 451 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 HSD17B3P37058 310 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 RPL3P39023 403 aaKnown RBP4.72□□□□□ -1.65
NCL-208ENST00000466274 MPV17P39210 176 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 VEGFCP49767 419 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 ARF6P62330 175 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 HPCAP84074 193 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 HSF2Q03933 536 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 ACSM1Q08AH1 577 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 AANATQ16613 207 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 CDONQ4KMG0 1287 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 TEX35Q5T0J7 233 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 SPATA46Q5T0L3 261 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 ANKRD26P1Q6NSI1 321 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 METAP1DQ6UB28 335 aaPredicted RBP4.72□□□□□ -1.65
NCL-208ENST00000466274 SLC16A14Q7RTX9 510 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 ZBTB46Q86UZ6 589 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 IGFN1Q86VF2 1251 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 UEVLDQ8IX04 471 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 SKA3Q8IX90 412 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 KLHL7Q8IXQ5 586 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 ZNF440Q8IYI8 595 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 TMEM123Q8N131 208 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 Q8N2B8 174 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 KDM8Q8N371 416 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 NATD1Q8N6N6 113 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 RBM15BQ8NDT2 890 aaKnown RBP4.72□□□□□ -1.65
NCL-208ENST00000466274 OR51G2Q8NGK0 314 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 SLC25A40Q8TBP6 338 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 PNPT1Q8TCS8 783 aaKnown RBP4.72□□□□□ -1.65
NCL-208ENST00000466274 C10orf82Q8WW14 230 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 ITLN1Q8WWA0 313 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 SLC25A36Q96CQ1 311 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 MTERF3Q96E29 417 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 TMEM237Q96Q45 408 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 SSX3Q99909 188 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 BAG1Q99933 345 aaPredicted RBP4.72□□□□□ -1.65
NCL-208ENST00000466274 PTDSS2Q9BVG9 487 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 QTRT1Q9BXR0 403 aaKnown RBP4.72□□□□□ -1.65
NCL-208ENST00000466274 DPY30Q9C005 99 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 OR2J1Q9GZK6 312 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 PRSS22Q9GZN4 317 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 ZNF350Q9GZX5 532 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 SIRPDQ9H106 197 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 MYLK2Q9H1R3 596 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 ELOVL3Q9HB03 270 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 RRAGDQ9NQL2 400 aaPredicted RBP4.72□□□□□ -1.65
NCL-208ENST00000466274 TUBG2Q9NRH3 451 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 SERTAD4Q9NUC0 356 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 B3GAT1Q9P2W7 334 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 ATP6V1HQ9UI12 483 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 WDR45Q9Y484 360 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 SMAD5-AS1Q9Y6J3 95 aa4.72□□□□□ -1.65
NCL-208ENST00000466274 MEIOCA2RUB1 952 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 CCDC154A6NI56 674 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 FAM159BA6NKW6 160 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 AKAP10O43572 662 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 NDUFA2O43678 99 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 TRIAP1O43715 76 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 ZNF500O60304 480 aaPredicted RBP4.71□□□□□ -1.66
NCL-208ENST00000466274 SUPT7LO94864 414 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 CYB5R3P00387 301 aaPredicted RBP4.71□□□□□ -1.66
NCL-208ENST00000466274 IGKV2-30P06310 120 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 GSTA2P09210 222 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 MATN1P21941 496 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 MYF6P23409 242 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 STOMP27105 288 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 SRP9P49458 86 aaKnown RBP4.71□□□□□ -1.66
NCL-208ENST00000466274 RGS6P49758 472 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 GDI2P50395 445 aaKnown RBP4.71□□□□□ -1.66
NCL-208ENST00000466274 PKNOX1P55347 436 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 NAB1Q13506 487 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 CHI3L2Q15782 390 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 MAPK14Q16539 360 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 LY6EQ16553 131 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 ZNF181Q2M3W8 571 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 SPRNQ5BIV9 151 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 PHYHD1Q5SRE7 291 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 WBP2NLQ6ICG8 309 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 ZNF841Q6ZN19 808 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 C3orf62Q6ZUJ4 267 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms