RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 ATPIF1Q9UII2 106 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 TPRKBQ9Y3C4 175 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 PCDHGB1Q9Y5G3 927 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 TIMM10BQ9Y5J6 103 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 FBN2P35556 2912 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 SGCEO43556 437 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 TMCC2O75069 709 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 RAB36O95755 333 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 ABHD16AO95870 558 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 CDK1P06493 297 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 LYNP07948 512 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 CELA3BP08861 270 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 COX5BP10606 129 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 CD79AP11912 226 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 CBR1P16152 277 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 CRYGSP22914 178 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 DCKP27707 260 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 C21orf33P30042 268 aaPredicted RBP9.69□□□□□ -0.86
VCP-204ENST00000466100 HOXC12P31275 282 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 ARR3P36575 388 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 OPRL1P41146 370 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 CAPZA2P47755 286 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 CHN2P52757 468 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 RAB1AP62820 205 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 PIGFQ07326 219 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 EIF2B1Q14232 305 aaKnown RBP9.69□□□□□ -0.86
VCP-204ENST00000466100 IRF3Q14653 427 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 GSG1Q2KHT4 349 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 RSPO1Q2MKA7 263 aaPredicted RBP9.69□□□□□ -0.86
VCP-204ENST00000466100 C3orf36Q3SXR2 165 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 CDONQ4KMG0 1287 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 RNLSQ5VYX0 342 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 ZNF774Q6NX45 483 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 TMEM53Q6P2H8 277 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 RHOUQ7L0Q8 258 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 ACBD7Q8N6N7 88 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 CPEB3Q8NE35 698 aaKnown RBP9.69□□□□□ -0.86
VCP-204ENST00000466100 OR10H4Q8NGA5 316 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 OR2AJ1Q8NGZ0 328 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 ASB17Q8WXJ9 295 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 SLAMF6Q96DU3 332 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 TMEM80Q96HE8 168 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 WFIKKN1Q96NZ8 548 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 TBX5Q99593 518 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 CDADC1Q9BWV3 514 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 HDHD2Q9H0R4 259 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 KCNN2Q9H2S1 579 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 C1orf198Q9H425 327 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 CCNB1IP1Q9NPC3 277 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 INPP5EQ9NRR6 644 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 ERVK13-1Q9NX77 482 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 ERVK-18Q9QC07 812 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 LAMP5Q9UJQ1 280 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 BLOC1S6Q9UL45 172 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 KLF2Q9Y5W3 355 aaPredicted RBP9.69□□□□□ -0.86
VCP-204ENST00000466100 TMEM14AQ9Y6G1 99 aa9.69□□□□□ -0.86
VCP-204ENST00000466100 IGHV1-18A0A0C4DH31 117 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 ZNF878C9JN71 531 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 PTGES3LE9PB15 166 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 ZNF670-ZNF695F2Z2N8 137 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 PHYHO14832 338 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 DOK2O60496 412 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 MT-ND2P03891 347 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 SERPINA5P05154 406 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 PAX7P23759 505 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 OTX1P32242 354 aaPredicted RBP9.68□□□□□ -0.86
VCP-204ENST00000466100 ATP6V1E1P36543 226 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 ETV1P50549 477 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 SNTB1Q13884 538 aaKnown RBP9.68□□□□□ -0.86
VCP-204ENST00000466100 DOC2BQ14184 412 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 GALEQ14376 348 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 RAB39AQ14964 217 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 ELFN2Q5R3F8 820 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 TMEM154Q6P9G4 183 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 ZNF322Q6U7Q0 402 aaPredicted RBP9.68□□□□□ -0.86
VCP-204ENST00000466100 LRRN1Q6UXK5 716 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 SSX8Q7RTT4 187 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 ZNF485Q8NCK3 441 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 OR1F12Q8NHA8 337 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 THEM6Q8WUY1 208 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 MYDGFQ969H8 173 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 RNF166Q96A37 237 aaPredicted RBP9.68□□□□□ -0.86
VCP-204ENST00000466100 MS4A3Q96HJ5 214 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 OR8B4Q96RC9 309 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 NR1H4Q96RI1 486 aaPredicted RBP9.68□□□□□ -0.86
VCP-204ENST00000466100 COQ7Q99807 217 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 ATF6BQ99941 703 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 CDCA4Q9BXL8 241 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 TTTY10Q9BZA0 68 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 ZNF696Q9H7X3 374 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 RNF121Q9H920 327 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 MOV10Q9HCE1 1003 aaKnown RBP9.68□□□□□ -0.86
VCP-204ENST00000466100 SLCO1C1Q9NYB5 712 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 PLEK2Q9NYT0 353 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 CLEC2DQ9UHP7 191 aa9.68□□□□□ -0.86
VCP-204ENST00000466100 MRM2Q9UI43 246 aaKnown RBP9.68□□□□□ -0.86
VCP-204ENST00000466100 EXOSC1Q9Y3B2 195 aaKnown RBP9.68□□□□□ -0.86
VCP-204ENST00000466100 LOC100509620A0A075B734 347 aa9.67□□□□□ -0.86
VCP-204ENST00000466100 TMEM129A0AVI4 362 aa9.67□□□□□ -0.86
VCP-204ENST00000466100 DAPL1A0PJW8 107 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms