RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 SMCO2A6NFE2 343 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 COLCA2A8K830 154 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 SGK1O00141 431 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 AGTP01019 485 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 APCSP02743 223 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 POLR2MP0CAP2 368 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 C1GALT1C1LP0DN25 315 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 EIF2S2P20042 333 aaKnown RBP2.37□□□□□ -2.03
LRCH3-211ENST00000466054 P2RX1P51575 399 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 CHRNA6Q15825 494 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 CHRFAM7AQ494W8 412 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 SMUG1Q53HV7 270 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 LRRC66Q68CR7 880 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 TTC23LQ6PF05 361 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 METAP1DQ6UB28 335 aaPredicted RBP2.37□□□□□ -2.03
LRCH3-211ENST00000466054 CMC1Q7Z7K0 106 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 METTL13Q8N6R0 699 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 RNF139Q8WU17 664 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 TMEM230Q96A57 120 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 TIMM17AQ99595 171 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 NEUROG2Q9H2A3 272 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 SPNS1Q9H2V7 528 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 ZDHHC4Q9NPG8 344 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 TMEM9BQ9NQ34 198 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 RRP15Q9Y3B9 282 aaKnown RBP2.37□□□□□ -2.03
LRCH3-211ENST00000466054 HYOU1Q9Y4L1 999 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 GAKO14976 1311 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 IGHV1OR15-9A0A0B4J2B8 117 aa2.36□□□□□ -2.03
LRCH3-211ENST00000466054 SMKR1H3BMG3 65 aa2.36□□□□□ -2.03
LRCH3-211ENST00000466054 SCAMP2O15127 329 aaKnown RBP2.36□□□□□ -2.03
LRCH3-211ENST00000466054 EIF4E2O60573 245 aaKnown RBP2.36□□□□□ -2.03
LRCH3-211ENST00000466054 CLDN11O75508 207 aa2.36□□□□□ -2.03
LRCH3-211ENST00000466054 MPZL1O95297 269 aa2.36□□□□□ -2.03
LRCH3-211ENST00000466054 H6PDO95479 791 aa2.36□□□□□ -2.03
LRCH3-211ENST00000466054 SERPINE2P07093 398 aa2.36□□□□□ -2.03
LRCH3-211ENST00000466054 PABPC4LP0CB38 370 aaKnown RBP2.36□□□□□ -2.03
LRCH3-211ENST00000466054 ATF6P18850 670 aa2.36□□□□□ -2.03
LRCH3-211ENST00000466054 HCAR3P49019 387 aa2.36□□□□□ -2.03
LRCH3-211ENST00000466054 PRR3P79522 188 aaKnown RBP2.36□□□□□ -2.03
LRCH3-211ENST00000466054 SP4Q02446 784 aa2.36□□□□□ -2.03
LRCH3-211ENST00000466054 PRSS8Q16651 343 aa2.36□□□□□ -2.03
LRCH3-211ENST00000466054 NPSR1Q6W5P4 371 aa2.36□□□□□ -2.03
LRCH3-211ENST00000466054 CENPQQ7L2Z9 268 aaPredicted RBP2.36□□□□□ -2.03
LRCH3-211ENST00000466054 NEGR1Q7Z3B1 354 aa2.36□□□□□ -2.03
LRCH3-211ENST00000466054 LGI3Q8N145 548 aa2.36□□□□□ -2.03
LRCH3-211ENST00000466054 OR8U1Q8NH10 309 aa2.36□□□□□ -2.03
LRCH3-211ENST00000466054 ESR2Q92731 530 aa2.36□□□□□ -2.03
LRCH3-211ENST00000466054 L3HYPDHQ96EM0 354 aa2.36□□□□□ -2.03
LRCH3-211ENST00000466054 DOK1Q99704 481 aa2.36□□□□□ -2.03
LRCH3-211ENST00000466054 C20orf24Q9BUV8 137 aa2.36□□□□□ -2.03
LRCH3-211ENST00000466054 NEK6Q9HC98 313 aa2.36□□□□□ -2.03
LRCH3-211ENST00000466054 MTCH1Q9NZJ7 389 aa2.36□□□□□ -2.03
LRCH3-211ENST00000466054 COL22A1Q8NFW1 1626 aaPredicted RBP2.35□□□□□ -2.03
LRCH3-211ENST00000466054 TRAV6A0A075B6T7 132 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 SOCS1O15524 211 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 RRP8O43159 456 aaKnown RBP2.35□□□□□ -2.03
LRCH3-211ENST00000466054 AQP8O94778 261 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 HLA-DQA1P01909 254 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 ARG1P05089 322 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 CTSLP07711 333 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 MYL2P10916 166 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 ERGP11308 486 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 GGT1P19440 569 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 OPRK1P41145 380 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 MRPL19P49406 292 aaKnown RBP2.35□□□□□ -2.03
LRCH3-211ENST00000466054 SYNJ2BPP57105 145 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 RGS8P57771 180 aaPredicted RBP2.35□□□□□ -2.03
LRCH3-211ENST00000466054 KRTAP10-10P60014 251 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 PPP1CBP62140 327 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 MRPL23Q16540 153 aaKnown RBP2.35□□□□□ -2.03
LRCH3-211ENST00000466054 SOHLH1Q5JUK2 328 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 PRAMEF20Q5VT98 475 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 GPR107Q5VW38 600 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 TMEM205Q6UW68 189 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 MBOAT1Q6ZNC8 495 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 SCD5Q86SK9 330 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 CDKL3Q8IVW4 592 aaPredicted RBP2.35□□□□□ -2.03
LRCH3-211ENST00000466054 CMTM1Q8IZ96 169 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 NPWQ8N729 165 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 NECAP1Q8NC96 275 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 CHST4Q8NCG5 386 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 OR4K5Q8NGD3 323 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 CAPSLQ8WWF8 208 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 MCUR1Q96AQ8 359 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 EEF1AKMT3Q96AZ1 226 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 DCPSQ96C86 337 aaKnown RBP2.35□□□□□ -2.03
LRCH3-211ENST00000466054 FLYWCH2Q96CP2 140 aaKnown RBP2.35□□□□□ -2.03
LRCH3-211ENST00000466054 CHP1Q99653 195 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 ZNF2Q9BSG1 426 aaPredicted RBP2.35□□□□□ -2.03
LRCH3-211ENST00000466054 OSBPL11Q9BXB4 747 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 ANKRA2Q9H9E1 313 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 ZNF160Q9HCG1 818 aa2.35□□□□□ -2.03
LRCH3-211ENST00000466054 H7C0C1 242 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 DNASE2O00115 360 aaPredicted RBP2.34□□□□□ -2.03
LRCH3-211ENST00000466054 LSM1O15116 133 aaKnown RBP2.34□□□□□ -2.03
LRCH3-211ENST00000466054 RAD51CO43502 376 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 CDC40O60508 579 aaKnown RBP eCLIP2.34□□□□□ -2.03
LRCH3-211ENST00000466054 HUS1O60921 280 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 ERLIN1O75477 346 aa2.34□□□□□ -2.03
LRCH3-211ENST00000466054 OR2F2O95006 317 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms