RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 MARCH7Q9H992 704 aa17.51■□□□□ 0.39
PTCD3-206ENST00000465560 VSTM5A8MXK1 200 aa17.5■□□□□ 0.39
PTCD3-206ENST00000465560 M0R129 80 aa17.5■□□□□ 0.39
PTCD3-206ENST00000465560 OVOL3O00110 214 aa17.5■□□□□ 0.39
PTCD3-206ENST00000465560 GPRIN2O60269 458 aa17.5■□□□□ 0.39
PTCD3-206ENST00000465560 ICMTO60725 284 aa17.5■□□□□ 0.39
PTCD3-206ENST00000465560 OR4A8P0C604 315 aa17.5■□□□□ 0.39
PTCD3-206ENST00000465560 FAM157BP0CG42 384 aa17.5■□□□□ 0.39
PTCD3-206ENST00000465560 PSKH1P11801 424 aa17.5■□□□□ 0.39
PTCD3-206ENST00000465560 GSTT1P30711 240 aa17.5■□□□□ 0.39
PTCD3-206ENST00000465560 SERPINF1P36955 418 aa17.5■□□□□ 0.39
PTCD3-206ENST00000465560 RPS27P42677 84 aaKnown RBP17.5■□□□□ 0.39
PTCD3-206ENST00000465560 TRIP10Q15642 601 aa17.5■□□□□ 0.39
PTCD3-206ENST00000465560 KLHL12Q53G59 568 aa17.5■□□□□ 0.39
PTCD3-206ENST00000465560 TEX30Q5JUR7 227 aa17.5■□□□□ 0.39
PTCD3-206ENST00000465560 ELFN2Q5R3F8 820 aa17.5■□□□□ 0.39
PTCD3-206ENST00000465560 TCEANCQ8N8B7 351 aa17.5■□□□□ 0.39
PTCD3-206ENST00000465560 TMEM163Q8TC26 289 aa17.5■□□□□ 0.39
PTCD3-206ENST00000465560 INTS14Q96SY0 518 aa17.5■□□□□ 0.39
PTCD3-206ENST00000465560 COQ7Q99807 217 aa17.5■□□□□ 0.39
PTCD3-206ENST00000465560 FOXC2Q99958 501 aa17.5■□□□□ 0.39
PTCD3-206ENST00000465560 CREBBPQ92793 2442 aa17.5■□□□□ 0.39
PTCD3-206ENST00000465560 E9PQ18 207 aa17.49■□□□□ 0.39
PTCD3-206ENST00000465560 ZNF593O00488 134 aaPredicted RBP17.49■□□□□ 0.39
PTCD3-206ENST00000465560 TLX2O43763 284 aaPredicted RBP17.49■□□□□ 0.39
PTCD3-206ENST00000465560 SMPD2O60906 423 aa17.49■□□□□ 0.39
PTCD3-206ENST00000465560 SPARCP09486 303 aa17.49■□□□□ 0.39
PTCD3-206ENST00000465560 WNT5AP41221 380 aa17.49■□□□□ 0.39
PTCD3-206ENST00000465560 RAD52P43351 418 aa17.49■□□□□ 0.39
PTCD3-206ENST00000465560 UCP2P55851 309 aa17.49■□□□□ 0.39
PTCD3-206ENST00000465560 EFNB3Q15768 340 aa17.49■□□□□ 0.39
PTCD3-206ENST00000465560 ZIK1Q3SY52 487 aaPredicted RBP17.49■□□□□ 0.39
PTCD3-206ENST00000465560 ERI1Q8IV48 349 aaKnown RBP17.49■□□□□ 0.39
PTCD3-206ENST00000465560 TIGD4Q8IY51 512 aa17.49■□□□□ 0.39
PTCD3-206ENST00000465560 ZMYND19Q96E35 227 aaPredicted RBP17.49■□□□□ 0.39
PTCD3-206ENST00000465560 MAP6Q96JE9 813 aa17.49■□□□□ 0.39
PTCD3-206ENST00000465560 HRASLS5Q96KN8 279 aa17.49■□□□□ 0.39
PTCD3-206ENST00000465560 BCL2L14Q9BZR8 327 aa17.49■□□□□ 0.39
PTCD3-206ENST00000465560 TOR3AQ9H497 397 aa17.49■□□□□ 0.39
PTCD3-206ENST00000465560 DCLRE1BQ9H816 532 aa17.49■□□□□ 0.39
PTCD3-206ENST00000465560 PNRC2Q9NPJ4 139 aaKnown RBP17.49■□□□□ 0.39
PTCD3-206ENST00000465560 EIF3KQ9UBQ5 218 aaKnown RBP17.49■□□□□ 0.39
PTCD3-206ENST00000465560 CMAHPQ9Y471 501 aa17.49■□□□□ 0.39
PTCD3-206ENST00000465560 B9A039 149 aa17.48■□□□□ 0.39
PTCD3-206ENST00000465560 PAX1P15863 534 aa17.48■□□□□ 0.39
PTCD3-206ENST00000465560 RPS7P62081 194 aaKnown RBP17.48■□□□□ 0.39
PTCD3-206ENST00000465560 APOFQ13790 326 aa17.48■□□□□ 0.39
PTCD3-206ENST00000465560 MSMPQ1L6U9 139 aa17.48■□□□□ 0.39
PTCD3-206ENST00000465560 SWI5Q1ZZU3 235 aa17.48■□□□□ 0.39
PTCD3-206ENST00000465560 MST1LQ2TV78 715 aa17.48■□□□□ 0.39
PTCD3-206ENST00000465560 NXNL2Q5VZ03 156 aa17.48■□□□□ 0.39
PTCD3-206ENST00000465560 UNQ6126/PRO20091Q6UXV3 157 aa17.48■□□□□ 0.39
PTCD3-206ENST00000465560 ZNF101Q8IZC7 436 aa17.48■□□□□ 0.39
PTCD3-206ENST00000465560 OR6N2Q8NGY6 317 aa17.48■□□□□ 0.39
PTCD3-206ENST00000465560 SLC7A6Q92536 515 aa17.48■□□□□ 0.39
PTCD3-206ENST00000465560 MRPL24Q96A35 216 aaKnown RBP17.48■□□□□ 0.39
PTCD3-206ENST00000465560 C4orf45Q96LM5 186 aa17.48■□□□□ 0.39
PTCD3-206ENST00000465560 MBOAT4Q96T53 435 aa17.48■□□□□ 0.39
PTCD3-206ENST00000465560 PITX2Q99697 317 aa17.48■□□□□ 0.39
PTCD3-206ENST00000465560 ATF6BQ99941 703 aa17.48■□□□□ 0.39
PTCD3-206ENST00000465560 OR51B6Q9H340 312 aa17.48■□□□□ 0.39
PTCD3-206ENST00000465560 C8orf4Q9NR00 106 aa17.48■□□□□ 0.39
PTCD3-206ENST00000465560 ZNF701Q9NV72 531 aaPredicted RBP17.48■□□□□ 0.39
PTCD3-206ENST00000465560 OTOGQ6ZRI0 2925 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 CCDC182A6NF36 153 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 ABHD16AO95870 558 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 PEX2P28328 305 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 ART1P52961 327 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 CDC42P60953 191 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 ECH1Q13011 328 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 KRTAP27-1Q3LI81 207 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 LCN1P1Q5VSP4 162 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 AADACL4Q5VUY2 407 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 RGS7BPQ6MZT1 257 aaPredicted RBP17.47■□□□□ 0.39
PTCD3-206ENST00000465560 TMEM154Q6P9G4 183 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 ARL9Q6T311 187 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 RFPL4BQ6ZWI9 263 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 DCXRQ7Z4W1 244 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 C1orf174Q8IYL3 243 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 LRRC75A-AS1Q8N1F1 130 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 OR10S1Q8NGN2 331 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 OR8J1Q8NGP2 316 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 RDH12Q96NR8 316 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 IL4I1Q96RQ9 567 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 DCLRE1CQ96SD1 692 aaKnown RBP17.47■□□□□ 0.39
PTCD3-206ENST00000465560 GSX2Q9BZM3 304 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 CXXC4Q9H2H0 198 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 PLK3Q9H4B4 646 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 ELOVL3Q9HB03 270 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 ITGB1BP2Q9UKP3 347 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 VPS13CQ709C8 3753 aa17.47■□□□□ 0.39
PTCD3-206ENST00000465560 LCKP06239 509 aa17.46■□□□□ 0.39
PTCD3-206ENST00000465560 DBHP09172 617 aa17.46■□□□□ 0.39
PTCD3-206ENST00000465560 BMP4P12644 408 aa17.46■□□□□ 0.39
PTCD3-206ENST00000465560 CDKN1AP38936 164 aa17.46■□□□□ 0.39
PTCD3-206ENST00000465560 PTH2RP49190 550 aa17.46■□□□□ 0.39
PTCD3-206ENST00000465560 ERVS71-1P61550 626 aa17.46■□□□□ 0.39
PTCD3-206ENST00000465560 SNRPD2P62316 118 aaKnown RBP17.46■□□□□ 0.39
PTCD3-206ENST00000465560 LPCAT4Q643R3 524 aa17.46■□□□□ 0.39
PTCD3-206ENST00000465560 SHFQ7M4L6 423 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms