RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 PRODHO43272 600 aa17.49■□□□□ 0.39
SKA3-205ENST00000465471 GLCEO94923 617 aa17.49■□□□□ 0.39
SKA3-205ENST00000465471 POLR2IP36954 125 aaKnown RBP17.49■□□□□ 0.39
SKA3-205ENST00000465471 HTR5AP47898 357 aa17.49■□□□□ 0.39
SKA3-205ENST00000465471 UCP2P55851 309 aa17.49■□□□□ 0.39
SKA3-205ENST00000465471 ADAM8P78325 824 aa17.49■□□□□ 0.39
SKA3-205ENST00000465471 SNAPC1Q16533 368 aa17.49■□□□□ 0.39
SKA3-205ENST00000465471 KRTAP27-1Q3LI81 207 aa17.49■□□□□ 0.39
SKA3-205ENST00000465471 TEX30Q5JUR7 227 aa17.49■□□□□ 0.39
SKA3-205ENST00000465471 ELFN2Q5R3F8 820 aa17.49■□□□□ 0.39
SKA3-205ENST00000465471 SPNS3Q6ZMD2 512 aa17.49■□□□□ 0.39
SKA3-205ENST00000465471 CPOQ8IVL8 374 aa17.49■□□□□ 0.39
SKA3-205ENST00000465471 CBR4Q8N4T8 237 aa17.49■□□□□ 0.39
SKA3-205ENST00000465471 ZNF511Q8NB15 262 aa17.49■□□□□ 0.39
SKA3-205ENST00000465471 OR6K6Q8NGW6 343 aa17.49■□□□□ 0.39
SKA3-205ENST00000465471 OR1F12Q8NHA8 337 aa17.49■□□□□ 0.39
SKA3-205ENST00000465471 COQ7Q99807 217 aa17.49■□□□□ 0.39
SKA3-205ENST00000465471 C9orf16Q9BUW7 83 aa17.49■□□□□ 0.39
SKA3-205ENST00000465471 CACNG6Q9BXT2 260 aa17.49■□□□□ 0.39
SKA3-205ENST00000465471 PRRG3Q9BZD7 231 aa17.49■□□□□ 0.39
SKA3-205ENST00000465471 BCL2L14Q9BZR8 327 aa17.49■□□□□ 0.39
SKA3-205ENST00000465471 WDR76Q9H967 626 aa17.49■□□□□ 0.39
SKA3-205ENST00000465471 CMAHPQ9Y471 501 aa17.49■□□□□ 0.39
SKA3-205ENST00000465471 MAP1AP78559 2803 aaPredicted RBP17.48■□□□□ 0.39
SKA3-205ENST00000465471 PRKYO43930 277 aa17.48■□□□□ 0.39
SKA3-205ENST00000465471 FAM157BP0CG42 384 aa17.48■□□□□ 0.39
SKA3-205ENST00000465471 ZNF823P16415 610 aa17.48■□□□□ 0.39
SKA3-205ENST00000465471 RAD52P43351 418 aa17.48■□□□□ 0.39
SKA3-205ENST00000465471 EVX1P49640 407 aa17.48■□□□□ 0.39
SKA3-205ENST00000465471 ENTPD1P49961 510 aa17.48■□□□□ 0.39
SKA3-205ENST00000465471 RFPL4BQ6ZWI9 263 aa17.48■□□□□ 0.39
SKA3-205ENST00000465471 CXXC5Q7LFL8 322 aaKnown RBP17.48■□□□□ 0.39
SKA3-205ENST00000465471 BBS1Q8NFJ9 593 aa17.48■□□□□ 0.39
SKA3-205ENST00000465471 PERPQ96FX8 193 aa17.48■□□□□ 0.39
SKA3-205ENST00000465471 PLEKHA8Q96JA3 519 aa17.48■□□□□ 0.39
SKA3-205ENST00000465471 MAP6Q96JE9 813 aa17.48■□□□□ 0.39
SKA3-205ENST00000465471 MRPL37Q9BZE1 423 aaKnown RBP17.48■□□□□ 0.39
SKA3-205ENST00000465471 ITPR3Q14573 2671 aa17.48■□□□□ 0.39
SKA3-205ENST00000465471 ZNF469Q96JG9 3925 aaPredicted RBP17.47■□□□□ 0.39
SKA3-205ENST00000465471 VSTM5A8MXK1 200 aa17.47■□□□□ 0.39
SKA3-205ENST00000465471 ZNF250P15622 560 aa17.47■□□□□ 0.39
SKA3-205ENST00000465471 CCNOP22674 350 aa17.47■□□□□ 0.39
SKA3-205ENST00000465471 RPS27P42677 84 aaKnown RBP17.47■□□□□ 0.39
SKA3-205ENST00000465471 ERVS71-1P61550 626 aa17.47■□□□□ 0.39
SKA3-205ENST00000465471 RSPO1Q2MKA7 263 aaPredicted RBP17.47■□□□□ 0.39
SKA3-205ENST00000465471 SLC35D3Q5M8T2 416 aa17.47■□□□□ 0.39
SKA3-205ENST00000465471 PRSS57Q6UWY2 283 aa17.47■□□□□ 0.39
SKA3-205ENST00000465471 TIGD4Q8IY51 512 aa17.47■□□□□ 0.39
SKA3-205ENST00000465471 OR10S1Q8NGN2 331 aa17.47■□□□□ 0.39
SKA3-205ENST00000465471 OR2AJ1Q8NGZ0 328 aa17.47■□□□□ 0.39
SKA3-205ENST00000465471 SLC7A6Q92536 515 aa17.47■□□□□ 0.39
SKA3-205ENST00000465471 DOK1Q99704 481 aa17.47■□□□□ 0.39
SKA3-205ENST00000465471 CDADC1Q9BWV3 514 aa17.47■□□□□ 0.39
SKA3-205ENST00000465471 OR51V1Q9H2C8 321 aa17.47■□□□□ 0.39
SKA3-205ENST00000465471 RIBC2Q9H4K1 309 aa17.47■□□□□ 0.39
SKA3-205ENST00000465471 IGLV3-9A0A075B6K5 115 aa17.46■□□□□ 0.39
SKA3-205ENST00000465471 GSTT1P30711 240 aa17.46■□□□□ 0.39
SKA3-205ENST00000465471 SNRPD2P62316 118 aaKnown RBP17.46■□□□□ 0.39
SKA3-205ENST00000465471 RGS7BPQ6MZT1 257 aaPredicted RBP17.46■□□□□ 0.39
SKA3-205ENST00000465471 C1orf174Q8IYL3 243 aa17.46■□□□□ 0.39
SKA3-205ENST00000465471 ST7LQ8TDW4 575 aa17.46■□□□□ 0.39
SKA3-205ENST00000465471 OTULINQ96BN8 352 aa17.46■□□□□ 0.39
SKA3-205ENST00000465471 C4orf45Q96LM5 186 aa17.46■□□□□ 0.39
SKA3-205ENST00000465471 DCLRE1CQ96SD1 692 aaKnown RBP17.46■□□□□ 0.39
SKA3-205ENST00000465471 INTS14Q96SY0 518 aa17.46■□□□□ 0.39
SKA3-205ENST00000465471 SLC29A1Q99808 456 aa17.46■□□□□ 0.39
SKA3-205ENST00000465471 OR51B6Q9H340 312 aa17.46■□□□□ 0.39
SKA3-205ENST00000465471 DDX28Q9NUL7 540 aaKnown RBP17.46■□□□□ 0.39
SKA3-205ENST00000465471 TBCCD1Q9NVR7 557 aa17.46■□□□□ 0.39
SKA3-205ENST00000465471 EIF3KQ9UBQ5 218 aaKnown RBP17.46■□□□□ 0.39
SKA3-205ENST00000465471 FBXO9Q9UK97 447 aaPredicted RBP17.46■□□□□ 0.39
SKA3-205ENST00000465471 CCDC182A6NF36 153 aa17.45■□□□□ 0.38
SKA3-205ENST00000465471 ERICH4A6NGS2 130 aa17.45■□□□□ 0.38
SKA3-205ENST00000465471 J3QW42 95 aa17.45■□□□□ 0.38
SKA3-205ENST00000465471 M0R129 80 aa17.45■□□□□ 0.38
SKA3-205ENST00000465471 ZNF593O00488 134 aaPredicted RBP17.45■□□□□ 0.38
SKA3-205ENST00000465471 BAG2O95816 211 aa17.45■□□□□ 0.38
SKA3-205ENST00000465471 NGFP01138 241 aa17.45■□□□□ 0.38
SKA3-205ENST00000465471 IGHV4-39P01824 125 aa17.45■□□□□ 0.38
SKA3-205ENST00000465471 DBHP09172 617 aa17.45■□□□□ 0.38
SKA3-205ENST00000465471 BMP4P12644 408 aa17.45■□□□□ 0.38
SKA3-205ENST00000465471 PPOXP50336 477 aa17.45■□□□□ 0.38
SKA3-205ENST00000465471 RAD23AP54725 363 aa17.45■□□□□ 0.38
SKA3-205ENST00000465471 ATP5J2P56134 94 aa17.45■□□□□ 0.38
SKA3-205ENST00000465471 ECH1Q13011 328 aa17.45■□□□□ 0.38
SKA3-205ENST00000465471 AADACL4Q5VUY2 407 aa17.45■□□□□ 0.38
SKA3-205ENST00000465471 SHEQ5VZ18 495 aa17.45■□□□□ 0.38
SKA3-205ENST00000465471 LRP11Q86VZ4 500 aa17.45■□□□□ 0.38
SKA3-205ENST00000465471 OR1J1Q8NGS3 322 aa17.45■□□□□ 0.38
SKA3-205ENST00000465471 TMEM163Q8TC26 289 aa17.45■□□□□ 0.38
SKA3-205ENST00000465471 IPCEF1Q8WWN9 437 aaPredicted RBP17.45■□□□□ 0.38
SKA3-205ENST00000465471 ZMYND19Q96E35 227 aaPredicted RBP17.45■□□□□ 0.38
SKA3-205ENST00000465471 TRMT61AQ96FX7 289 aaKnown RBP17.45■□□□□ 0.38
SKA3-205ENST00000465471 MARS2Q96GW9 593 aaKnown RBP17.45■□□□□ 0.38
SKA3-205ENST00000465471 ATF6BQ99941 703 aa17.45■□□□□ 0.38
SKA3-205ENST00000465471 ELOVL3Q9HB03 270 aa17.45■□□□□ 0.38
SKA3-205ENST00000465471 MYEF2Q9P2K5 600 aaKnown RBP17.45■□□□□ 0.38
SKA3-205ENST00000465471 PMF1-BGLAPU3KQ54 211 aa17.45■□□□□ 0.38
SKA3-205ENST00000465471 H3BSA7 217 aa17.44■□□□□ 0.38
SKA3-205ENST00000465471 NDUFS7O75251 213 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms