RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 LRRC8AQ8IWT6 810 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 CMTM8Q8IZV2 173 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 RNF10Q8N5U6 811 aaKnown RBP3.45□□□□□ -1.86
PTCD3-205ENST00000464541 OR7G1Q8NGA0 311 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 OR2G3Q8NGZ4 309 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 FGF14Q92915 247 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 PLEKHA8Q96JA3 519 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 C12orf42Q96LP6 360 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 ZNF641Q96N77 438 aaPredicted RBP3.45□□□□□ -1.86
PTCD3-205ENST00000464541 OXGR1Q96P68 337 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 OPALINQ96PE5 141 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 CSPG4P5Q96PW8 444 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 MED10Q9BTT4 135 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 PRRG3Q9BZD7 231 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 PLA2G2FQ9BZM2 168 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 GBA3Q9H227 469 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 CDC42EP4Q9H3Q1 356 aaKnown RBP3.45□□□□□ -1.86
PTCD3-205ENST00000464541 SAV1Q9H4B6 383 aaPredicted RBP3.45□□□□□ -1.86
PTCD3-205ENST00000464541 LRRC19Q9H756 370 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 NRBP2Q9NSY0 501 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 MYEF2Q9P2K5 600 aaKnown RBP3.45□□□□□ -1.86
PTCD3-205ENST00000464541 GGA2Q9UJY4 613 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 PSMD13Q9UNM6 376 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 RBMX2Q9Y388 322 aaKnown RBP3.45□□□□□ -1.86
PTCD3-205ENST00000464541 KPTNQ9Y664 436 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 CARMIL3Q8ND23 1372 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 C1orf232A0A0U1RR37 186 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 NDUFAB1O14561 156 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 DYNC1I1O14576 645 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 RAB29O14966 203 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 LCA5LO95447 670 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 ETHE1O95571 254 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 OXSR1O95747 527 aaPredicted RBP3.44□□□□□ -1.86
PTCD3-205ENST00000464541 SERPINE2P07093 398 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 DCNP07585 359 aaKnown RBP3.44□□□□□ -1.86
PTCD3-205ENST00000464541 KITLGP21583 273 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 CD40LGP29965 261 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 SLC1A2P43004 574 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 SLC1A1P43005 524 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 ZNF136P52737 540 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 MYL6P60660 151 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 ERVK-25P63136 954 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 MRPL23Q16540 153 aaKnown RBP3.44□□□□□ -1.86
PTCD3-205ENST00000464541 TMEM183BQ1AE95 376 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 C18orf21Q32NC0 220 aaPredicted RBP3.44□□□□□ -1.86
PTCD3-205ENST00000464541 HSDL1Q3SXM5 330 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 COA6Q5JTJ3 125 aaKnown RBP3.44□□□□□ -1.86
PTCD3-205ENST00000464541 PLA2G4DQ86XP0 818 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 PCP2Q8IVA1 136 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 TMEM183AQ8IXX5 376 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 FAM86B1Q8N7N1 296 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 C8orf31Q8N9H6 132 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 VN1R2Q8NFZ6 395 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 NAT6Q93015 286 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 ECHDC3Q96DC8 303 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 C9orf72Q96LT7 481 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 XPO6Q96QU8 1125 aaKnown RBP3.44□□□□□ -1.86
PTCD3-205ENST00000464541 TAAR1Q96RJ0 339 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 CNN2Q99439 309 aaKnown RBP3.44□□□□□ -1.86
PTCD3-205ENST00000464541 DRC3Q9H069 523 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 PPA2Q9H2U2 334 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 CLMPQ9H6B4 373 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 UCK1Q9HA47 277 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 MRPL47Q9HD33 250 aaKnown RBP3.44□□□□□ -1.86
PTCD3-205ENST00000464541 VCX3AQ9NNX9 186 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 GPATCH2LQ9NWQ4 482 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 GIN1Q9NXP7 522 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 ADA2Q9NZK5 511 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 UXTQ9UBK9 157 aaPredicted RBP3.44□□□□□ -1.86
PTCD3-205ENST00000464541 ENPP5Q9UJA9 477 aa3.44□□□□□ -1.86
PTCD3-205ENST00000464541 RBMY1BA6NDE4 496 aaKnown RBP3.43□□□□□ -1.86
PTCD3-205ENST00000464541 RBMY1EA6NEQ0 496 aaKnown RBP3.43□□□□□ -1.86
PTCD3-205ENST00000464541 FARS2O95363 451 aaKnown RBP3.43□□□□□ -1.86
PTCD3-205ENST00000464541 ANXA5P08758 320 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 RBMY1DP0C7P1 496 aaKnown RBP3.43□□□□□ -1.86
PTCD3-205ENST00000464541 OCMP0CE72 109 aaPredicted RBP3.43□□□□□ -1.86
PTCD3-205ENST00000464541 RBMY1A1P0DJD3 496 aaKnown RBP3.43□□□□□ -1.86
PTCD3-205ENST00000464541 PMCHP20382 165 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 CXCL5P42830 114 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 RPS9P46781 194 aaKnown RBP3.43□□□□□ -1.86
PTCD3-205ENST00000464541 LCN2P80188 198 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 STX3Q13277 289 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 UBE2SQ16763 222 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 DEFB116Q30KQ4 102 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 DMRTC1Q5HYR2 192 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 GPR107Q5VW38 600 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 SASS6Q6UVJ0 657 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 PID1Q7Z2X4 250 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 HDDC2Q7Z4H3 204 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 CYP4Z1Q86W10 505 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 CDKL3Q8IVW4 592 aaPredicted RBP3.43□□□□□ -1.86
PTCD3-205ENST00000464541 TTC29Q8NA56 475 aaPredicted RBP3.43□□□□□ -1.86
PTCD3-205ENST00000464541 OR4F6Q8NGB9 312 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 OR4D6Q8NGJ1 314 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 CA5BP1Q8WTZ4 195 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 ANKRD7Q92527 254 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 KIFAP3Q92845 792 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 CCDC126Q96EE4 140 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 CHMP6Q96FZ7 201 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 ALS2CR12Q96Q35 445 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms