RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 EBI3Q14213 229 aa2.51□□□□□ -2.01
CLK1-208ENST00000464454 C16orf72Q14CZ0 275 aa2.51□□□□□ -2.01
CLK1-208ENST00000464454 FAM83EQ2M2I3 478 aa2.51□□□□□ -2.01
CLK1-208ENST00000464454 ORMDL2Q53FV1 153 aa2.51□□□□□ -2.01
CLK1-208ENST00000464454 GPR107Q5VW38 600 aa2.51□□□□□ -2.01
CLK1-208ENST00000464454 FAM71E1Q6IPT2 247 aa2.51□□□□□ -2.01
CLK1-208ENST00000464454 PLET1Q6UQ28 207 aa2.51□□□□□ -2.01
CLK1-208ENST00000464454 MICU2Q8IYU8 434 aa2.51□□□□□ -2.01
CLK1-208ENST00000464454 PQLC3Q8N755 202 aa2.51□□□□□ -2.01
CLK1-208ENST00000464454 BBOF1Q8ND07 529 aa2.51□□□□□ -2.01
CLK1-208ENST00000464454 OR10G2Q8NGC3 310 aa2.51□□□□□ -2.01
CLK1-208ENST00000464454 OR9G4Q8NGQ1 327 aa2.51□□□□□ -2.01
CLK1-208ENST00000464454 MRGPRFQ96AM1 343 aa2.51□□□□□ -2.01
CLK1-208ENST00000464454 SAV1Q9H4B6 383 aaPredicted RBP2.51□□□□□ -2.01
CLK1-208ENST00000464454 NTN4Q9HB63 628 aa2.51□□□□□ -2.01
CLK1-208ENST00000464454 CCNB1IP1Q9NPC3 277 aa2.51□□□□□ -2.01
CLK1-208ENST00000464454 ZNF222Q9UK12 451 aa2.51□□□□□ -2.01
CLK1-208ENST00000464454 KCNE1BA0A087WTH5 132 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 A0A1B0GW55 424 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 OR6C74A6NCV1 312 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 RAD51CO43502 376 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 CDC40O60508 579 aaKnown RBP eCLIP2.5□□□□□ -2.01
CLK1-208ENST00000464454 RDH16O75452 317 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 ZNF324O75467 553 aaPredicted RBP2.5□□□□□ -2.01
CLK1-208ENST00000464454 CTAG2O75638 210 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 FLOT1O75955 427 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 AQP8O94778 261 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 CTDNEP1O95476 244 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 LSM8O95777 96 aaKnown RBP2.5□□□□□ -2.01
CLK1-208ENST00000464454 CD3GP09693 182 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 DUX4L2P0CJ85 424 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 DUX4L3P0CJ86 424 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 DUX4L5P0CJ88 424 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 DUX4L6P0CJ89 424 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 DUX4L7P0CJ90 424 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 OR8G3PP0DMU2 310 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 SFTPCP11686 197 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 PSMC3P17980 439 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 ATF6P18850 670 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 TCN2P20062 427 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 RAB3AP20336 220 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 TNFSF9P41273 254 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 P2RX1P51575 399 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 ESRRGP62508 458 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 SEMG2Q02383 582 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 IRF4Q15306 451 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 STUMQ69YW2 141 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 CEMP1Q6PRD7 247 aaPredicted RBP2.5□□□□□ -2.01
CLK1-208ENST00000464454 MRPL55Q7Z7F7 128 aaKnown RBP2.5□□□□□ -2.01
CLK1-208ENST00000464454 H1FOOQ8IZA3 346 aaPredicted RBP2.5□□□□□ -2.01
CLK1-208ENST00000464454 OFCC1Q8IZS5 231 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 JAGN1Q8N5M9 183 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 COMMD1Q8N668 190 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 METTL13Q8N6R0 699 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 NPWQ8N729 165 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 CHST4Q8NCG5 386 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 OR2L8Q8NGY9 312 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 UBALD1Q8TB05 177 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 PDXPQ96GD0 296 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 ANKRD60Q9BZ19 345 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 ELOVL6Q9H5J4 265 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 MRM3Q9HC36 420 aaKnown RBP2.5□□□□□ -2.01
CLK1-208ENST00000464454 CYTL1Q9NRR1 136 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 ZNRD1Q9P1U0 126 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 DUX4Q9UBX2 424 aa2.5□□□□□ -2.01
CLK1-208ENST00000464454 GPATCH8Q9UKJ3 1502 aaKnown RBP2.5□□□□□ -2.01
CLK1-208ENST00000464454 IGLV4-60A0A075B6I1 120 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 LRRIQ4A6NIV6 560 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 M0R3G1 203 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 B4GALT5O43286 388 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 CD160O95971 181 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 EIF4EP06730 217 aaKnown RBP2.49□□□□□ -2.01
CLK1-208ENST00000464454 CLTAP09496 248 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 ERGP11308 486 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 U2AF2P26368 475 aaKnown RBP eCLIP2.49□□□□□ -2.014e-11■■□□□ 13
CLK1-208ENST00000464454 HCAR3P49019 387 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 RCAN2Q14206 197 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 CHRFAM7AQ494W8 412 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 LINC00483Q53H64 154 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 TPTE2P1Q5T6R2 138 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 C1orf185Q5T7R7 199 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 NANOGP8Q6NSW7 305 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 CLEC2AQ6UVW9 174 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 MBOAT2Q6ZWT7 520 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 ABHD12BQ7Z5M8 362 aaPredicted RBP2.49□□□□□ -2.01
CLK1-208ENST00000464454 CBR4Q8N4T8 237 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 BPIFCQ8NFQ6 507 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 OR52E2Q8NGJ4 325 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 LRRC29Q8WV35 223 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 APH1BQ8WW43 257 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 TEKT3Q9BXF9 490 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 UCK2Q9BZX2 261 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 IQCGQ9H095 443 aaKnown RBP2.49□□□□□ -2.01
CLK1-208ENST00000464454 SPNS1Q9H2V7 528 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 C12orf10Q9HB07 376 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 MRPS30Q9NP92 439 aaKnown RBP2.49□□□□□ -2.01
CLK1-208ENST00000464454 AGPAT4Q9NRZ5 378 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 ZNF355PQ9NSJ1 428 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 DDX19AQ9NUU7 478 aaKnown RBP2.49□□□□□ -2.01
CLK1-208ENST00000464454 RABL2AQ9UBK7 228 aaPredicted RBP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms