RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 EIF3IQ13347 325 aaKnown RBP6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 FHL1Q13642 323 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 SLC17A1Q14916 467 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 SURF2Q15527 256 aaPredicted RBP6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 TOMM34Q15785 309 aaPredicted RBP6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 GPR162Q16538 588 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 ZNF74Q16587 644 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 PRICKLE4Q2TBC4 344 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 LBHQ53QV2 105 aaPredicted RBP6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 TMEM128Q5BJH2 165 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 FAM209BQ5JX69 171 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 LCE3BQ5TA77 95 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 EEF1A1P5Q5VTE0 462 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 TMEM225Q6GV28 225 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 TBC1D3CQ6IPX1 549 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 DEGS2Q6QHC5 323 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 KIRREL2Q6UWL6 708 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 C1QL4Q86Z23 238 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 CBLN2Q8IUK8 224 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 TBC1D3Q8IZP1 549 aaPredicted RBP6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 RFLNBQ8N5W9 214 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 OR51L1Q8NGJ5 315 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 OR1J1Q8NGS3 322 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 OTOSQ8NHW6 89 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 RNASE11Q8TAA1 199 aaKnown RBP6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 NANPQ8TBE9 248 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 SLC22A8Q8TCC7 542 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 ADAMTS17Q8TE56 1095 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 RNF128Q8TEB7 428 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 ING5Q8WYH8 240 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 AQP3Q92482 292 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 CTHRC1Q96CG8 243 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 Q96M85 177 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 ZNF75AQ96N20 296 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 CRB3Q9BUF7 120 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 TTTY10Q9BZA0 68 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 TLNRD1Q9H1K6 362 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 RGCCQ9H4X1 137 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 ESRP2Q9H6T0 727 aaKnown RBP6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 FKRPQ9H9S5 495 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 SEBOXQ9HB31 216 aaPredicted RBP6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 NIT2Q9NQR4 276 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 GSN-AS1Q9NRJ2 163 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 FAM212BQ9NTI7 297 aaPredicted RBP6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 FAM86C1Q9NVL1 165 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 SUSD2Q9UGT4 822 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 SLC17A4Q9Y2C5 497 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 STRAPQ9Y3F4 350 aaKnown RBP6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 ADAM18Q9Y3Q7 739 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 CSAG2Q9Y5P2 127 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 DMRT1Q9Y5R6 373 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 COL4A2P08572 1712 aa6.47□□□□□ -1.37
CLSTN1-204ENST00000464286 TRAV8-7A0A075B6U6 113 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 LOC390937A0A1W2PQ73 354 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 CPED1A4D0V7 1026 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 A6NIZ1 184 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 COLCA2A8K830 154 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 AP4M1O00189 453 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 CLDN4O14493 209 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 PPM1DO15297 605 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 CCL16O15467 120 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 MBTPS2O43462 519 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 CTSVO60911 334 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 FARS2O95363 451 aaKnown RBP6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 CXCL14O95715 111 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 IFNA10P01566 189 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 CD5P06127 495 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 ACAA1P09110 424 aaPredicted RBP6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 SFTA3P0C7M3 94 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 ZNF735P0CB33 412 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 HKR1P10072 659 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 SLC2A1P11166 492 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 PRF1P14222 555 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 PGAM2P15259 253 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 RCC1P18754 421 aaPredicted RBP6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 AGAP20933 346 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 C5AR1P21730 350 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 HSD11B1P28845 292 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 S100A2P29034 98 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 GALNSP34059 522 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 MAGEB1P43366 347 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 KCNJ3P48549 501 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 SULT1A2P50226 295 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 PNLIPRP2P54317 469 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 TAS2R46P59540 309 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 RAB4BP61018 213 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 RAP1BP61224 184 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 RAP1AP62834 184 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 PPP1R1AQ13522 171 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 ATXN7L3Q14CW9 347 aaPredicted RBP6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 PPA1Q15181 289 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 PDGFRLQ15198 375 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 MLF2Q15773 248 aaPredicted RBP6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 GFOD2Q3B7J2 385 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 LRRC37A5PQ49AS3 106 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 DEFB134Q4QY38 66 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 TRMT12Q53H54 448 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms