RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 LPOP22079 712 aaPredicted RBP3.25□□□□□ -1.89
COL8A1-205ENST00000463753 CD34P28906 385 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 GDF5P43026 501 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 EFNA3P52797 238 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 ERVFRD-1P60508 538 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 SELENOWP63302 87 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 ARHGAP1Q07960 439 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 TMEM115Q12893 351 aaPredicted RBP3.25□□□□□ -1.89
COL8A1-205ENST00000463753 CRMP1Q14194 572 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF345Q14585 488 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 RAB35Q15286 201 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 HMGN3Q15651 99 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 MAPK14Q16539 360 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 TTLL9Q3SXZ7 439 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 TRIM61Q5EBN2 209 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 FBXO47Q5MNV8 452 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 EOGTQ5NDL2 527 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 LY6G6FQ5SQ64 297 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 AADACL3Q5VUY0 350 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 SMARCD3Q6STE5 483 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 SLC22A25Q6T423 547 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 MPZL3Q6UWV2 235 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 ENPP7Q6UWV6 458 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 LSRQ86X29 649 aaPredicted RBP3.25□□□□□ -1.89
COL8A1-205ENST00000463753 NRMQ8IXM6 262 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF433Q8N7K0 673 aaPredicted RBP3.25□□□□□ -1.89
COL8A1-205ENST00000463753 OR4K17Q8NGC6 315 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 SMPDL3AQ92484 453 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 TSLPQ969D9 159 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 BPIFA2Q96DR5 249 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 C16orf58Q96GQ5 468 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 SLC35E1Q96K37 410 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 DERL3Q96Q80 235 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 C1QTNF3Q9BXJ4 246 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 ACTR3CQ9C0K3 210 aaPredicted RBP3.25□□□□□ -1.89
COL8A1-205ENST00000463753 IPPKQ9H8X2 491 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 LMAN1LQ9HAT1 526 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 PLEKHA2Q9HB19 425 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 PDE7BQ9NP56 450 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 MYNNQ9NPC7 610 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 TESQ9UGI8 421 aaKnown RBP3.25□□□□□ -1.89
COL8A1-205ENST00000463753 SLC5A6Q9Y289 635 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 PAM16Q9Y3D7 125 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 CCL27Q9Y4X3 112 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 CSAG2Q9Y5P2 127 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 TRIP11Q15643 1979 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 TRAV34A0A0B4J273 112 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.25□□□□□ -1.89
COL8A1-205ENST00000463753 LINC01553A4QN01 128 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 C5orf51A6NDU8 294 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 ANTXRLA6NF34 631 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 PRAMEF25A6NGN4 478 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 SERPINE3A8MV23 424 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 PRODHO43272 600 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 TSPAN6O43657 245 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 GJB5O95377 273 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 GCGP01275 180 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 CSN2P05814 226 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 CELA3AP09093 270 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 PIRTP0C851 137 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 FAM157CP0CG43 387 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 FGF5P12034 268 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 NT5EP21589 574 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 FDXRP22570 491 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 GABRR1P24046 479 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 FPR2P25090 351 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 ADORA2BP29275 332 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 AKT2P31751 481 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 DUSP3P51452 185 aaPredicted RBP3.25□□□□□ -1.89
COL8A1-205ENST00000463753 SUCLG1P53597 346 aaKnown RBP3.25□□□□□ -1.89
COL8A1-205ENST00000463753 ELLP55199 621 aaPredicted RBP3.25□□□□□ -1.89
COL8A1-205ENST00000463753 TAS2R38P59533 333 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 RAP1BP61224 184 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 RAB40BQ12829 278 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 UBE2V1Q13404 147 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 IL10RAQ13651 578 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 GPR18Q14330 331 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 EBPQ15125 230 aaKnown RBP3.25□□□□□ -1.89
COL8A1-205ENST00000463753 ELOBQ15370 118 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 MMDQ15546 238 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 VAMP3Q15836 100 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 CPSF6Q16630 551 aaKnown RBP eCLIP3.25□□□□□ -1.89
COL8A1-205ENST00000463753 CCSMST1Q4G0I0 132 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 GXYLT1Q4G148 440 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 OCIAD2Q56VL3 154 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 YOD1Q5VVQ6 348 aaPredicted RBP3.25□□□□□ -1.89
COL8A1-205ENST00000463753 EEF1DP3Q658K8 133 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 PODNL1Q6PEZ8 512 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 RPTNQ6XPR3 784 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 DPY19L2P2Q6ZN68 376 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 SLC36A1Q7Z2H8 476 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 P4HA3Q7Z4N8 544 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 ADIPOR2Q86V24 386 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 WDFY1Q8IWB7 410 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 MCEMP1Q8IX19 187 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 OR51G2Q8NGK0 314 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 OR1J2Q8NGS2 313 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 NFKBIDQ8NI38 313 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 SFXN5Q8TD22 340 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 CASTOR1Q8WTX7 329 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms