RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 NPIPB4C9JG80 1138 aa12.05□□□□□ -0.48
SMC1A-204ENST00000463684 C3orf80F5H4A9 247 aa12.05□□□□□ -0.48
SMC1A-204ENST00000463684 P2RY10O00398 339 aa12.05□□□□□ -0.48
SMC1A-204ENST00000463684 GPR137BO60478 399 aa12.05□□□□□ -0.48
SMC1A-204ENST00000463684 FSTL3O95633 263 aa12.05□□□□□ -0.48
SMC1A-204ENST00000463684 CSF1P09603 554 aa12.05□□□□□ -0.48
SMC1A-204ENST00000463684 MSR1P21757 451 aa12.05□□□□□ -0.48
SMC1A-204ENST00000463684 HTR5AP47898 357 aa12.05□□□□□ -0.48
SMC1A-204ENST00000463684 PCBP3P57721 371 aaKnown RBP12.05□□□□□ -0.48
SMC1A-204ENST00000463684 TOP3AQ13472 1001 aaPredicted RBP12.05□□□□□ -0.48
SMC1A-204ENST00000463684 MAVSQ7Z434 540 aa12.05□□□□□ -0.48
SMC1A-204ENST00000463684 OR5AS1Q8N127 324 aa12.05□□□□□ -0.48
SMC1A-204ENST00000463684 OR4D11Q8NGI4 311 aa12.05□□□□□ -0.48
SMC1A-204ENST00000463684 OR13G1Q8NGZ3 307 aa12.05□□□□□ -0.48
SMC1A-204ENST00000463684 PFN4Q8NHR9 129 aa12.05□□□□□ -0.48
SMC1A-204ENST00000463684 AENQ8WTP8 325 aaKnown RBP12.05□□□□□ -0.48
SMC1A-204ENST00000463684 MEGF10Q96KG7 1140 aa12.05□□□□□ -0.48
SMC1A-204ENST00000463684 PRSS27Q9BQR3 290 aa12.05□□□□□ -0.48
SMC1A-204ENST00000463684 WACQ9BTA9 647 aa12.05□□□□□ -0.48
SMC1A-204ENST00000463684 TRIM15Q9C019 465 aa12.05□□□□□ -0.48
SMC1A-204ENST00000463684 PCDHAC1Q9H158 963 aa12.05□□□□□ -0.48
SMC1A-204ENST00000463684 ACOXLQ9NUZ1 547 aa12.05□□□□□ -0.48
SMC1A-204ENST00000463684 CCDC167Q9P0B6 97 aa12.05□□□□□ -0.48
SMC1A-204ENST00000463684 TRBV5-3A0A0A0MS03 114 aa12.04□□□□□ -0.48
SMC1A-204ENST00000463684 C5orf63A6NC05 138 aa12.04□□□□□ -0.48
SMC1A-204ENST00000463684 PHYHO14832 338 aa12.04□□□□□ -0.48
SMC1A-204ENST00000463684 PIN1P1O15428 100 aa12.04□□□□□ -0.48
SMC1A-204ENST00000463684 TOX4O94842 621 aa12.04□□□□□ -0.48
SMC1A-204ENST00000463684 LIPFP07098 398 aa12.04□□□□□ -0.48
SMC1A-204ENST00000463684 RAC2P15153 192 aa12.04□□□□□ -0.48
SMC1A-204ENST00000463684 RBM34P42696 430 aaKnown RBP12.04□□□□□ -0.48
SMC1A-204ENST00000463684 MRPL19P49406 292 aaKnown RBP12.04□□□□□ -0.48
SMC1A-204ENST00000463684 ENDOGQ14249 297 aaKnown RBP12.04□□□□□ -0.48
SMC1A-204ENST00000463684 CYP51A1Q16850 503 aa12.04□□□□□ -0.48
SMC1A-204ENST00000463684 ZNF181Q2M3W8 571 aa12.04□□□□□ -0.48
SMC1A-204ENST00000463684 ALG10Q5BKT4 473 aa12.04□□□□□ -0.48
SMC1A-204ENST00000463684 CD276Q5ZPR3 534 aa12.04□□□□□ -0.48
SMC1A-204ENST00000463684 WDR25Q64LD2 544 aaPredicted RBP12.04□□□□□ -0.48
SMC1A-204ENST00000463684 C1orf94Q6P1W5 598 aa12.04□□□□□ -0.48
SMC1A-204ENST00000463684 GDPGP1Q6ZNW5 385 aa12.04□□□□□ -0.48
SMC1A-204ENST00000463684 MOGAT3Q86VF5 341 aa12.04□□□□□ -0.48
SMC1A-204ENST00000463684 TSPYL5Q86VY4 417 aaPredicted RBP12.04□□□□□ -0.48
SMC1A-204ENST00000463684 FUNDC1Q8IVP5 155 aa12.04□□□□□ -0.48
SMC1A-204ENST00000463684 OR10AD1Q8NGE0 317 aa12.04□□□□□ -0.48
SMC1A-204ENST00000463684 LIPHQ8WWY8 451 aa12.04□□□□□ -0.48
SMC1A-204ENST00000463684 ZNF582Q96NG8 517 aaPredicted RBP12.04□□□□□ -0.48
SMC1A-204ENST00000463684 CDADC1Q9BWV3 514 aa12.04□□□□□ -0.48
SMC1A-204ENST00000463684 WNK1Q9H4A3 2382 aa12.03□□□□□ -0.48
SMC1A-204ENST00000463684 CENPVL3A0A0U1RRI6 287 aa12.03□□□□□ -0.48
SMC1A-204ENST00000463684 ZNF879B4DU55 563 aa12.03□□□□□ -0.48
SMC1A-204ENST00000463684 SGCEO43556 437 aa12.03□□□□□ -0.48
SMC1A-204ENST00000463684 DOK2O60496 412 aa12.03□□□□□ -0.48
SMC1A-204ENST00000463684 IGF2P01344 180 aa12.03□□□□□ -0.48
SMC1A-204ENST00000463684 SFTPBP07988 381 aa12.03□□□□□ -0.48
SMC1A-204ENST00000463684 TSPAN19P0C672 248 aa12.03□□□□□ -0.48
SMC1A-204ENST00000463684 IRF2P14316 349 aa12.03□□□□□ -0.48
SMC1A-204ENST00000463684 NPY4RP50391 375 aa12.03□□□□□ -0.48
SMC1A-204ENST00000463684 WDR4P57081 412 aaKnown RBP12.03□□□□□ -0.48
SMC1A-204ENST00000463684 RPL27P61353 136 aaKnown RBP12.03□□□□□ -0.48
SMC1A-204ENST00000463684 SCRN3Q0VDG4 424 aa12.03□□□□□ -0.48
SMC1A-204ENST00000463684 BEAN1Q3B7T3 259 aa12.03□□□□□ -0.48
SMC1A-204ENST00000463684 LYPD2Q6UXB3 125 aa12.03□□□□□ -0.48
SMC1A-204ENST00000463684 DCDC5Q6ZRR9 648 aa12.03□□□□□ -0.48
SMC1A-204ENST00000463684 FOXL2NBQ6ZUU3 175 aa12.03□□□□□ -0.48
SMC1A-204ENST00000463684 REC114Q7Z4M0 266 aa12.03□□□□□ -0.48
SMC1A-204ENST00000463684 PATL1Q86TB9 770 aaKnown RBP12.03□□□□□ -0.48
SMC1A-204ENST00000463684 NKAIN4Q8IVV8 208 aa12.03□□□□□ -0.48
SMC1A-204ENST00000463684 CLDN22Q8N7P3 220 aa12.03□□□□□ -0.48
SMC1A-204ENST00000463684 ZSCAN4Q8NAM6 433 aaPredicted RBP12.03□□□□□ -0.48
SMC1A-204ENST00000463684 OR8G5Q8NG78 346 aa12.03□□□□□ -0.48
SMC1A-204ENST00000463684 TMEM255BQ8WV15 326 aa12.03□□□□□ -0.48
SMC1A-204ENST00000463684 C10orf82Q8WW14 230 aa12.03□□□□□ -0.48
SMC1A-204ENST00000463684 TMEM239Q8WW34 195 aa12.03□□□□□ -0.48
SMC1A-204ENST00000463684 RASSF5Q8WWW0 418 aa12.03□□□□□ -0.48
SMC1A-204ENST00000463684 DPAGT1Q9H3H5 408 aa12.03□□□□□ -0.48
SMC1A-204ENST00000463684 C20orf141Q9NUB4 165 aa12.03□□□□□ -0.48
SMC1A-204ENST00000463684 IGHV3-64DA0A0J9YX35 117 aa12.02□□□□□ -0.49
SMC1A-204ENST00000463684 A6NIZ1 184 aa12.02□□□□□ -0.49
SMC1A-204ENST00000463684 G3V4G9 280 aa12.02□□□□□ -0.49
SMC1A-204ENST00000463684 POLR3GO15318 223 aaPredicted RBP12.02□□□□□ -0.49
SMC1A-204ENST00000463684 PIP5K1CO60331 668 aa12.02□□□□□ -0.49
SMC1A-204ENST00000463684 IGHV4-59P01825 116 aa12.02□□□□□ -0.49
SMC1A-204ENST00000463684 CFHR2P36980 270 aa12.02□□□□□ -0.49
SMC1A-204ENST00000463684 IER3P46695 156 aa12.02□□□□□ -0.49
SMC1A-204ENST00000463684 ERFP50548 548 aa12.02□□□□□ -0.49
SMC1A-204ENST00000463684 TAS2R41P59536 307 aa12.02□□□□□ -0.49
SMC1A-204ENST00000463684 RAP1BP61224 184 aa12.02□□□□□ -0.49
SMC1A-204ENST00000463684 RAP1AP62834 184 aa12.02□□□□□ -0.49
SMC1A-204ENST00000463684 FAM201AQ5SY85 155 aa12.02□□□□□ -0.49
SMC1A-204ENST00000463684 EPGNQ6UW88 154 aa12.02□□□□□ -0.49
SMC1A-204ENST00000463684 SCCPDHQ8NBX0 429 aa12.02□□□□□ -0.49
SMC1A-204ENST00000463684 OR5L1Q8NGL2 311 aa12.02□□□□□ -0.49
SMC1A-204ENST00000463684 TECTBQ96PL2 329 aa12.02□□□□□ -0.49
SMC1A-204ENST00000463684 CPPED1Q9BRF8 314 aaPredicted RBP12.02□□□□□ -0.49
SMC1A-204ENST00000463684 C16orf95Q9H693 158 aa12.02□□□□□ -0.49
SMC1A-204ENST00000463684 POLE4Q9NR33 117 aa12.02□□□□□ -0.49
SMC1A-204ENST00000463684 ERVK-18Q9QC07 812 aa12.02□□□□□ -0.49
SMC1A-204ENST00000463684 MED31Q9Y3C7 131 aa12.02□□□□□ -0.49
SMC1A-204ENST00000463684 IGHV1-69DA0A0B4J2H0 117 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 C22orf46C9J442 243 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms