RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 LOC110117498-PIK3R3F6TDL0 507 aa16.72■□□□□ 0.27
CCDC78-206ENST00000463539 CASKO14936 926 aa16.72■□□□□ 0.27
CCDC78-206ENST00000463539 GATBO75879 557 aaKnown RBP16.72■□□□□ 0.27
CCDC78-206ENST00000463539 HSD11B1P28845 292 aa16.72■□□□□ 0.27
CCDC78-206ENST00000463539 DCTDP32321 178 aa16.72■□□□□ 0.27
CCDC78-206ENST00000463539 STK11Q15831 433 aa16.72■□□□□ 0.27
CCDC78-206ENST00000463539 KRTCAP3Q53RY4 240 aa16.72■□□□□ 0.27
CCDC78-206ENST00000463539 ZNF585AQ6P3V2 769 aa16.72■□□□□ 0.27
CCDC78-206ENST00000463539 FGD2Q7Z6J4 655 aa16.72■□□□□ 0.27
CCDC78-206ENST00000463539 CATSPERDQ86XM0 798 aa16.72■□□□□ 0.27
CCDC78-206ENST00000463539 UBE2J2Q8N2K1 259 aa16.72■□□□□ 0.27
CCDC78-206ENST00000463539 SLC25A46Q96AG3 418 aa16.72■□□□□ 0.27
CCDC78-206ENST00000463539 DACH2Q96NX9 599 aa16.72■□□□□ 0.27
CCDC78-206ENST00000463539 SH3GL3Q99963 347 aa16.72■□□□□ 0.27
CCDC78-206ENST00000463539 C12orf49Q9H741 205 aa16.72■□□□□ 0.27
CCDC78-206ENST00000463539 NIPAL2Q9H841 368 aa16.72■□□□□ 0.27
CCDC78-206ENST00000463539 PNRC2Q9NPJ4 139 aaKnown RBP16.72■□□□□ 0.27
CCDC78-206ENST00000463539 RPL36A-HNRNPH2H7BZ11 118 aa16.71■□□□□ 0.27
CCDC78-206ENST00000463539 SRSF10O75494 262 aaKnown RBP16.71■□□□□ 0.27
CCDC78-206ENST00000463539 CST2P09228 141 aa16.71■□□□□ 0.27
CCDC78-206ENST00000463539 RORCP51449 518 aa16.71■□□□□ 0.27
CCDC78-206ENST00000463539 ODF4Q2M2E3 257 aa16.71■□□□□ 0.27
CCDC78-206ENST00000463539 LINC00303Q3SY05 128 aa16.71■□□□□ 0.27
CCDC78-206ENST00000463539 NRN1LQ496H8 165 aa16.71■□□□□ 0.27
CCDC78-206ENST00000463539 FAM27D1Q5T7N8 215 aa16.71■□□□□ 0.27
CCDC78-206ENST00000463539 SLC22A24Q8N4F4 322 aa16.71■□□□□ 0.27
CCDC78-206ENST00000463539 Q8NA96 180 aa16.71■□□□□ 0.27
CCDC78-206ENST00000463539 WNT2BQ93097 391 aa16.71■□□□□ 0.27
CCDC78-206ENST00000463539 FBXO17Q96EF6 278 aa16.71■□□□□ 0.27
CCDC78-206ENST00000463539 PPIL3Q9H2H8 161 aaKnown RBP16.71■□□□□ 0.27
CCDC78-206ENST00000463539 TUBD1Q9UJT1 453 aa16.71■□□□□ 0.27
CCDC78-206ENST00000463539 SLC22A13Q9Y226 551 aa16.71■□□□□ 0.27
CCDC78-206ENST00000463539 PIEZO2Q9H5I5 2752 aa16.71■□□□□ 0.27
CCDC78-206ENST00000463539 ARL6IP5O75915 188 aa16.7■□□□□ 0.26
CCDC78-206ENST00000463539 FARS2O95363 451 aaKnown RBP16.7■□□□□ 0.26
CCDC78-206ENST00000463539 CLEC2LP0C7M8 214 aa16.7■□□□□ 0.26
CCDC78-206ENST00000463539 MYL9P24844 172 aa16.7■□□□□ 0.26
CCDC78-206ENST00000463539 MTNR1BP49286 362 aa16.7■□□□□ 0.26
CCDC78-206ENST00000463539 MMP16P51512 607 aa16.7■□□□□ 0.26
CCDC78-206ENST00000463539 SF3B4Q15427 424 aaKnown RBP eCLIP16.7■□□□□ 0.26
CCDC78-206ENST00000463539 ZNF813Q6ZN06 617 aa16.7■□□□□ 0.26
CCDC78-206ENST00000463539 GCNT2Q8N0V5 402 aa16.7■□□□□ 0.26
CCDC78-206ENST00000463539 IL17RDQ8NFM7 739 aa16.7■□□□□ 0.26
CCDC78-206ENST00000463539 DDX28Q9NUL7 540 aaKnown RBP16.7■□□□□ 0.26
CCDC78-206ENST00000463539 A3GALT2U3KPV4 340 aa16.7■□□□□ 0.26
CCDC78-206ENST00000463539 SHISA3A0PJX4 238 aa16.7■□□□□ 0.26
CCDC78-206ENST00000463539 ZNF879B4DU55 563 aa16.7■□□□□ 0.26
CCDC78-206ENST00000463539 PSMA6P60900 246 aaKnown RBP16.7■□□□□ 0.26
CCDC78-206ENST00000463539 GRB2P62993 217 aaKnown RBP16.7■□□□□ 0.26
CCDC78-206ENST00000463539 HIST1H3AP68431 136 aa16.7■□□□□ 0.26
CCDC78-206ENST00000463539 HNRNPA0Q13151 305 aaKnown RBP16.7■□□□□ 0.26
CCDC78-206ENST00000463539 BCL2L15Q5TBC7 163 aa16.7■□□□□ 0.26
CCDC78-206ENST00000463539 HIST2H3PS2Q5TEC6 136 aa16.7■□□□□ 0.26
CCDC78-206ENST00000463539 HIST2H3AQ71DI3 136 aa16.7■□□□□ 0.26
CCDC78-206ENST00000463539 TEX19Q8NA77 164 aa16.7■□□□□ 0.26
CCDC78-206ENST00000463539 PHYHIPQ92561 330 aa16.7■□□□□ 0.26
CCDC78-206ENST00000463539 BARHL1Q9BZE3 327 aa16.7■□□□□ 0.26
CCDC78-206ENST00000463539 C6orf62Q9GZU0 229 aaPredicted RBP16.7■□□□□ 0.26
CCDC78-206ENST00000463539 MMP27Q9H306 513 aa16.7■□□□□ 0.26
CCDC78-206ENST00000463539 FAM206AQ9NX38 181 aa16.7■□□□□ 0.26
CCDC78-206ENST00000463539 OR52A1Q9UKL2 312 aa16.7■□□□□ 0.26
CCDC78-206ENST00000463539 A0A1W2PPK0 400 aa16.69■□□□□ 0.26
CCDC78-206ENST00000463539 UCHL1P09936 223 aa16.69■□□□□ 0.26
CCDC78-206ENST00000463539 OCM2P0CE71 109 aa16.69■□□□□ 0.26
CCDC78-206ENST00000463539 MAPK3P27361 379 aaPredicted RBP16.69■□□□□ 0.26
CCDC78-206ENST00000463539 OR3A2P47893 321 aa16.69■□□□□ 0.26
CCDC78-206ENST00000463539 ARF1P84077 181 aaKnown RBP16.69■□□□□ 0.26
CCDC78-206ENST00000463539 SCRN3Q0VDG4 424 aa16.69■□□□□ 0.26
CCDC78-206ENST00000463539 FAPQ12884 760 aa16.69■□□□□ 0.26
CCDC78-206ENST00000463539 Q499Y3 187 aa16.69■□□□□ 0.26
CCDC78-206ENST00000463539 ELFN2Q5R3F8 820 aa16.69■□□□□ 0.26
CCDC78-206ENST00000463539 NSUN5P2Q63ZY6 315 aa16.69■□□□□ 0.26
CCDC78-206ENST00000463539 ZNF324BQ6AW86 544 aaPredicted RBP16.69■□□□□ 0.26
CCDC78-206ENST00000463539 OR2A2Q6IF42 318 aa16.69■□□□□ 0.26
CCDC78-206ENST00000463539 FAM214BQ7L5A3 538 aa16.69■□□□□ 0.26
CCDC78-206ENST00000463539 SLC16A14Q7RTX9 510 aa16.69■□□□□ 0.26
CCDC78-206ENST00000463539 ABHD12BQ7Z5M8 362 aaPredicted RBP16.69■□□□□ 0.26
CCDC78-206ENST00000463539 RDH10Q8IZV5 341 aa16.69■□□□□ 0.26
CCDC78-206ENST00000463539 C9orf106Q8NAJ2 232 aa16.69■□□□□ 0.26
CCDC78-206ENST00000463539 GPR148Q8TDV2 347 aa16.69■□□□□ 0.26
CCDC78-206ENST00000463539 ATF6BQ99941 703 aa16.69■□□□□ 0.26
CCDC78-206ENST00000463539 NXF2Q9GZY0 626 aaKnown RBP16.69■□□□□ 0.26
CCDC78-206ENST00000463539 G6PC2Q9NQR9 355 aa16.69■□□□□ 0.26
CCDC78-206ENST00000463539 PLEK2Q9NYT0 353 aa16.69■□□□□ 0.26
CCDC78-206ENST00000463539 MALT1Q9UDY8 824 aa16.69■□□□□ 0.26
CCDC78-206ENST00000463539 SLC5A6Q9Y289 635 aa16.69■□□□□ 0.26
CCDC78-206ENST00000463539 ATMQ13315 3056 aa16.69■□□□□ 0.26
CCDC78-206ENST00000463539 SMIM30A4D0T7 59 aa16.68■□□□□ 0.26
CCDC78-206ENST00000463539 ACOD1A6NK06 481 aa16.68■□□□□ 0.26
CCDC78-206ENST00000463539 TPOP07202 933 aa16.68■□□□□ 0.26
CCDC78-206ENST00000463539 PCBD1P61457 104 aa16.68■□□□□ 0.26
CCDC78-206ENST00000463539 HSD17B12Q53GQ0 312 aa16.68■□□□□ 0.26
CCDC78-206ENST00000463539 C9orf135Q5VTT2 229 aa16.68■□□□□ 0.26
CCDC78-206ENST00000463539 FBXW9Q5XUX1 488 aa16.68■□□□□ 0.26
CCDC78-206ENST00000463539 UNQ9370/PRO34162Q6UXP9 181 aa16.68■□□□□ 0.26
CCDC78-206ENST00000463539 LINC00299Q6ZSB3 139 aa16.68■□□□□ 0.26
CCDC78-206ENST00000463539 CISD2Q8N5K1 135 aaKnown RBP16.68■□□□□ 0.26
CCDC78-206ENST00000463539 PPP1R14AQ96A00 147 aa16.68■□□□□ 0.26
CCDC78-206ENST00000463539 MOB1AQ9H8S9 216 aa16.68■□□□□ 0.26
CCDC78-206ENST00000463539 BRD7Q9NPI1 651 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms