RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 MPV17P39210 176 aa13.87□□□□□ -0.19
COL1A1-202ENST00000463440 SLC36A3Q495N2 470 aa13.87□□□□□ -0.19
COL1A1-202ENST00000463440 OTPQ5XKR4 325 aa13.87□□□□□ -0.19
COL1A1-202ENST00000463440 ZBTB46Q86UZ6 589 aa13.87□□□□□ -0.19
COL1A1-202ENST00000463440 ADGRG5Q8IZF4 528 aa13.87□□□□□ -0.19
COL1A1-202ENST00000463440 GJC3Q8NFK1 279 aa13.87□□□□□ -0.19
COL1A1-202ENST00000463440 OR1F12Q8NHA8 337 aa13.87□□□□□ -0.19
COL1A1-202ENST00000463440 IPCEF1Q8WWN9 437 aaPredicted RBP13.87□□□□□ -0.19
COL1A1-202ENST00000463440 COG8Q96MW5 612 aa13.87□□□□□ -0.19
COL1A1-202ENST00000463440 DGCR6LQ9BY27 220 aa13.87□□□□□ -0.19
COL1A1-202ENST00000463440 TUBG2Q9NRH3 451 aa13.87□□□□□ -0.19
COL1A1-202ENST00000463440 CYSLTR2Q9NS75 346 aa13.87□□□□□ -0.19
COL1A1-202ENST00000463440 TBC1D23Q9NUY8 699 aa13.87□□□□□ -0.19
COL1A1-202ENST00000463440 VNN3Q9NY84 501 aa13.87□□□□□ -0.19
COL1A1-202ENST00000463440 GRIP1Q9Y3R0 1128 aa13.87□□□□□ -0.19
COL1A1-202ENST00000463440 SONP18583 2426 aaKnown RBP13.87□□□□□ -0.19
COL1A1-202ENST00000463440 DHRS12A0PJE2 317 aa13.86□□□□□ -0.19
COL1A1-202ENST00000463440 OR6C68A6NDL8 312 aa13.86□□□□□ -0.19
COL1A1-202ENST00000463440 OR6C6A6NF89 314 aa13.86□□□□□ -0.19
COL1A1-202ENST00000463440 BHLHE40O14503 412 aa13.86□□□□□ -0.19
COL1A1-202ENST00000463440 GNGT2O14610 69 aa13.86□□□□□ -0.19
COL1A1-202ENST00000463440 RER1O15258 196 aa13.86□□□□□ -0.19
COL1A1-202ENST00000463440 TPD52L2O43399 206 aaKnown RBP13.86□□□□□ -0.19
COL1A1-202ENST00000463440 NCR1O76036 304 aa13.86□□□□□ -0.19
COL1A1-202ENST00000463440 GPANK1O95872 356 aa13.86□□□□□ -0.19
COL1A1-202ENST00000463440 TACSTD2P09758 323 aa13.86□□□□□ -0.19
COL1A1-202ENST00000463440 ZNF16P17020 682 aaPredicted RBP13.86□□□□□ -0.19
COL1A1-202ENST00000463440 COL8A2P25067 703 aa13.86□□□□□ -0.19
COL1A1-202ENST00000463440 LIPAP38571 399 aa13.86□□□□□ -0.19
COL1A1-202ENST00000463440 MAGEB1P43366 347 aa13.86□□□□□ -0.19
COL1A1-202ENST00000463440 ZNF81P51508 661 aa13.86□□□□□ -0.19
COL1A1-202ENST00000463440 CCL8P80075 99 aa13.86□□□□□ -0.19
COL1A1-202ENST00000463440 MEP1BQ16820 701 aa13.86□□□□□ -0.19
COL1A1-202ENST00000463440 CCDC92Q53HC0 331 aaPredicted RBP13.86□□□□□ -0.19
COL1A1-202ENST00000463440 SLC26A10Q8NG04 563 aa13.86□□□□□ -0.19
COL1A1-202ENST00000463440 OR10G2Q8NGC3 310 aa13.86□□□□□ -0.19
COL1A1-202ENST00000463440 SLC7A6OSQ96CW6 309 aaPredicted RBP13.86□□□□□ -0.19
COL1A1-202ENST00000463440 DCLRE1CQ96SD1 692 aaKnown RBP13.86□□□□□ -0.19
COL1A1-202ENST00000463440 CDADC1Q9BWV3 514 aa13.86□□□□□ -0.19
COL1A1-202ENST00000463440 TSSK6Q9BXA6 273 aa13.86□□□□□ -0.19
COL1A1-202ENST00000463440 PLA2G12AQ9BZM1 189 aa13.86□□□□□ -0.19
COL1A1-202ENST00000463440 HDHD2Q9H0R4 259 aa13.86□□□□□ -0.19
COL1A1-202ENST00000463440 FN3KQ9H479 309 aa13.86□□□□□ -0.19
COL1A1-202ENST00000463440 DECR2Q9NUI1 292 aa13.86□□□□□ -0.19
COL1A1-202ENST00000463440 CGGBP1Q9UFW8 167 aaPredicted RBP13.86□□□□□ -0.19
COL1A1-202ENST00000463440 LHFPL6Q9Y693 200 aa13.86□□□□□ -0.19
COL1A1-202ENST00000463440 LILRA1O75019 489 aa13.85□□□□□ -0.19
COL1A1-202ENST00000463440 DNAJC8O75937 253 aaPredicted RBP13.85□□□□□ -0.19
COL1A1-202ENST00000463440 HLA-DQA2P01906 255 aa13.85□□□□□ -0.19
COL1A1-202ENST00000463440 GPR6P46095 362 aaPredicted RBP13.85□□□□□ -0.19
COL1A1-202ENST00000463440 RGS6P49758 472 aa13.85□□□□□ -0.19
COL1A1-202ENST00000463440 TMEM33P57088 247 aa13.85□□□□□ -0.19
COL1A1-202ENST00000463440 HIST1H3AP68431 136 aa13.85□□□□□ -0.19
COL1A1-202ENST00000463440 TEKQ02763 1124 aa13.85□□□□□ -0.19
COL1A1-202ENST00000463440 COX10Q12887 443 aa13.85□□□□□ -0.19
COL1A1-202ENST00000463440 FLOT2Q14254 428 aa13.85□□□□□ -0.19
COL1A1-202ENST00000463440 ZMAT1Q5H9K5 638 aa13.85□□□□□ -0.19
COL1A1-202ENST00000463440 HIST2H3PS2Q5TEC6 136 aa13.85□□□□□ -0.19
COL1A1-202ENST00000463440 FAM166AQ6J272 317 aa13.85□□□□□ -0.19
COL1A1-202ENST00000463440 HIST2H3AQ71DI3 136 aa13.85□□□□□ -0.19
COL1A1-202ENST00000463440 SPATA24Q86W54 205 aa13.85□□□□□ -0.19
COL1A1-202ENST00000463440 HIPK1Q86Z02 1210 aa13.85□□□□□ -0.19
COL1A1-202ENST00000463440 LNX2Q8N448 690 aa13.85□□□□□ -0.19
COL1A1-202ENST00000463440 OR8D4Q8NGM9 314 aa13.85□□□□□ -0.19
COL1A1-202ENST00000463440 OR2AJ1Q8NGZ0 328 aa13.85□□□□□ -0.19
COL1A1-202ENST00000463440 OR2T4Q8NH00 348 aa13.85□□□□□ -0.19
COL1A1-202ENST00000463440 GIPC3Q8TF64 312 aa13.85□□□□□ -0.19
COL1A1-202ENST00000463440 CANT1Q8WVQ1 401 aa13.85□□□□□ -0.19
COL1A1-202ENST00000463440 SLC7A6Q92536 515 aa13.85□□□□□ -0.19
COL1A1-202ENST00000463440 HPS1Q92902 700 aa13.85□□□□□ -0.19
COL1A1-202ENST00000463440 YY1AP1Q9H869 796 aa13.85□□□□□ -0.19
COL1A1-202ENST00000463440 ZNF275Q9NSD4 429 aaPredicted RBP13.85□□□□□ -0.19
COL1A1-202ENST00000463440 BAIAP2Q9UQB8 552 aa13.85□□□□□ -0.19
COL1A1-202ENST00000463440 LOC100289279A0A1B0GTE1 492 aa13.84□□□□□ -0.19
COL1A1-202ENST00000463440 LRP5LA4QPB2 252 aa13.84□□□□□ -0.19
COL1A1-202ENST00000463440 J3QW42 95 aa13.84□□□□□ -0.19
COL1A1-202ENST00000463440 TIMM8AO60220 97 aaPredicted RBP13.84□□□□□ -0.19
COL1A1-202ENST00000463440 TFP02787 698 aa13.84□□□□□ -0.19
COL1A1-202ENST00000463440 MMP15P51511 669 aa13.84□□□□□ -0.19
COL1A1-202ENST00000463440 TSTQ16762 297 aaKnown RBP13.84□□□□□ -0.19
COL1A1-202ENST00000463440 FAM209AQ5JX71 171 aa13.84□□□□□ -0.19
COL1A1-202ENST00000463440 CORO6Q6QEF8 472 aa13.84□□□□□ -0.19
COL1A1-202ENST00000463440 CD300LDQ6UXZ3 194 aa13.84□□□□□ -0.19
COL1A1-202ENST00000463440 CYB561A3Q8NBI2 242 aa13.84□□□□□ -0.19
COL1A1-202ENST00000463440 PROKR2Q8NFJ6 384 aa13.84□□□□□ -0.19
COL1A1-202ENST00000463440 OR2T33Q8NG76 320 aa13.84□□□□□ -0.19
COL1A1-202ENST00000463440 GTF3AQ92664 365 aaKnown RBP13.84□□□□□ -0.19
COL1A1-202ENST00000463440 YIPF5Q969M3 257 aa13.84□□□□□ -0.19
COL1A1-202ENST00000463440 MSI2Q96DH6 328 aaKnown RBP13.84□□□□□ -0.19
COL1A1-202ENST00000463440 COQ7Q99807 217 aa13.84□□□□□ -0.19
COL1A1-202ENST00000463440 SAP30LQ9HAJ7 183 aa13.84□□□□□ -0.19
COL1A1-202ENST00000463440 TMEM160Q9NX00 188 aa13.84□□□□□ -0.19
COL1A1-202ENST00000463440 KCNG2Q9UJ96 466 aa13.84□□□□□ -0.19
COL1A1-202ENST00000463440 KLHL21Q9UJP4 597 aa13.84□□□□□ -0.19
COL1A1-202ENST00000463440 ZDHHC8Q9ULC8 765 aa13.84□□□□□ -0.19
COL1A1-202ENST00000463440 KCNS2Q9ULS6 477 aa13.84□□□□□ -0.19
COL1A1-202ENST00000463440 JMJD1CQ15652 2540 aa13.83□□□□□ -0.2
COL1A1-202ENST00000463440 IGHV1-69-2A0A0G2JMI3 117 aa13.83□□□□□ -0.2
COL1A1-202ENST00000463440 ARRDC5A6NEK1 342 aa13.83□□□□□ -0.2
COL1A1-202ENST00000463440 PPIHO43447 177 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms