RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 HAVCR1Q96D42 359 aa6.19□□□□□ -1.42
PTPRF-210ENST00000463041 RAB39BQ96DA2 213 aa6.19□□□□□ -1.42
PTPRF-210ENST00000463041 CMBLQ96DG6 245 aa6.19□□□□□ -1.42
PTPRF-210ENST00000463041 RSRC1Q96IZ7 334 aaKnown RBP6.19□□□□□ -1.42
PTPRF-210ENST00000463041 SAMD8Q96LT4 415 aa6.19□□□□□ -1.42
PTPRF-210ENST00000463041 NSMCE2Q96MF7 247 aa6.19□□□□□ -1.42
PTPRF-210ENST00000463041 DCLRE1CQ96SD1 692 aaKnown RBP6.19□□□□□ -1.42
PTPRF-210ENST00000463041 NUAK2Q9H093 628 aa6.19□□□□□ -1.42
PTPRF-210ENST00000463041 SYT4Q9H2B2 425 aa6.19□□□□□ -1.42
PTPRF-210ENST00000463041 RERGLQ9H628 205 aa6.19□□□□□ -1.42
PTPRF-210ENST00000463041 ZNF665Q9H7R5 613 aa6.19□□□□□ -1.42
PTPRF-210ENST00000463041 SRA1Q9HD15 236 aaKnown RBP6.19□□□□□ -1.42
PTPRF-210ENST00000463041 EMC7Q9NPA0 242 aa6.19□□□□□ -1.42
PTPRF-210ENST00000463041 IL1RAPQ9NPH3 570 aa6.19□□□□□ -1.42
PTPRF-210ENST00000463041 HIF1ANQ9NWT6 349 aa6.19□□□□□ -1.42
PTPRF-210ENST00000463041 PLEK2Q9NYT0 353 aa6.19□□□□□ -1.42
PTPRF-210ENST00000463041 ATPIF1Q9UII2 106 aa6.19□□□□□ -1.42
PTPRF-210ENST00000463041 TMCC3Q9ULS5 477 aa6.19□□□□□ -1.42
PTPRF-210ENST00000463041 STARD10Q9Y365 291 aa6.19□□□□□ -1.42
PTPRF-210ENST00000463041 A0A0A6YYJ9 748 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 OR6C6A6NF89 314 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 J3QW42 95 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 SURF4O15260 269 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 TCF21O43680 179 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 TIMM8AO60220 97 aaPredicted RBP6.18□□□□□ -1.42
PTPRF-210ENST00000463041 OR10H3O60404 316 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 DOK2O60496 412 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 MPZL1O95297 269 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 RENP00797 406 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 SEMG1P04279 462 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 FABP3P05413 133 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 RAC2P15153 192 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 TNFRSF1AP19438 455 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 KITLGP21583 273 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 SLC6A6P31641 620 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 MSX2P35548 267 aaPredicted RBP6.18□□□□□ -1.42
PTPRF-210ENST00000463041 GSSP48637 474 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 FXYD6P3P58550 94 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 GNGT1P63211 74 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 HIST1H3AP68431 136 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 MVKQ03426 396 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 GLO1Q04760 184 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 SLC36A3Q495N2 470 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 CCDC92Q53HC0 331 aaPredicted RBP6.18□□□□□ -1.42
PTPRF-210ENST00000463041 TMEM255AQ5JRV8 349 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 HIST2H3PS2Q5TEC6 136 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 SLC27A4Q6P1M0 643 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 C1orf94Q6P1W5 598 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 FAHD2BQ6P2I3 314 aaPredicted RBP6.18□□□□□ -1.42
PTPRF-210ENST00000463041 PTCHD4Q6ZW05 846 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 RFPL4BQ6ZWI9 263 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 HIST2H3AQ71DI3 136 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 VASH1Q7L8A9 365 aaPredicted RBP6.18□□□□□ -1.42
PTPRF-210ENST00000463041 LINC00471Q8N535 108 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 FAM86B1Q8N7N1 296 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 GTF3AQ92664 365 aaKnown RBP6.18□□□□□ -1.42
PTPRF-210ENST00000463041 POP5Q969H6 163 aaKnown RBP6.18□□□□□ -1.42
PTPRF-210ENST00000463041 FAHD2AQ96GK7 314 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 ERMAPQ96PL5 475 aaPredicted RBP6.18□□□□□ -1.42
PTPRF-210ENST00000463041 GPA33Q99795 319 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 NARFLQ9H6Q4 476 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 ARL8BQ9NVJ2 186 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 ASH2LQ9UBL3 628 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 IL20RAQ9UHF4 553 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 PURGQ9UJV8 347 aaKnown RBP6.18□□□□□ -1.42
PTPRF-210ENST00000463041 B9D1Q9UPM9 204 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 WIPI2Q9Y4P8 454 aa6.18□□□□□ -1.42
PTPRF-210ENST00000463041 IGLV1-36A0A0B4J1U3 117 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 ZSCAN5BA6NJL1 495 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 J3QLI3 93 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 IFNL4K9M1U5 179 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 ARPC2O15144 300 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 RER1O15258 196 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 PLPP2O43688 288 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 DEAF1O75398 565 aaPredicted RBP6.17□□□□□ -1.42
PTPRF-210ENST00000463041 PPP1R3DO95685 299 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 IGHV2-5P01817 119 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 HIST1H1CP16403 213 aaKnown RBP6.17□□□□□ -1.42
PTPRF-210ENST00000463041 GATA3P23771 443 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 FPR3P25089 353 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 NOS3P29474 1203 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 RRM2P31350 389 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 CENPAP49450 140 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 MXRA7P84157 204 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 TNFAIP6P98066 277 aaPredicted RBP6.17□□□□□ -1.42
PTPRF-210ENST00000463041 SPIBQ01892 262 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 TSPAN31Q12999 210 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 ECH1Q13011 328 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 KRTAP24-1Q3LI83 254 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 AVPI1Q5T686 147 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 LEG1Q6P5S2 330 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 FBXW12Q6X9E4 464 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 ZBTB46Q86UZ6 589 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 JAZF1Q86VZ6 243 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 ZDHHC21Q8IVQ6 265 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 DEFB107AQ8IZN7 70 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 OR6V1Q8N148 313 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 ARHGAP24Q8N264 748 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 APOBEC3DQ96AK3 386 aaPredicted RBP6.17□□□□□ -1.42
PTPRF-210ENST00000463041 NSL1Q96IY1 281 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms