RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 DCTN6O00399 190 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 ARPC3O15145 178 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 SPRY3O43610 288 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 TIMM8AO60220 97 aaPredicted RBP8.66□□□□□ -1.02
SF3A3-204ENST00000462258 KRT36O76013 467 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 GPANK1O95872 356 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 RENP00797 406 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 IGHV1-46P01743 117 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 TFP02787 698 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 HIST1H1CP16403 213 aaKnown RBP8.66□□□□□ -1.02
SF3A3-204ENST00000462258 SRD5A1P18405 259 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 GSTM3P21266 225 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 NOS3P29474 1203 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 CENPAP49450 140 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 TMEM33P57088 247 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 TEKQ02763 1124 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 TSPAN31Q12999 210 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 MEP1BQ16820 701 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 CR1LQ2VPA4 569 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 CLEC12AQ5QGZ9 265 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 C1orf94Q6P1W5 598 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 RINLQ6ZS11 566 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 USP51Q70EK9 711 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 CXXC5Q7LFL8 322 aaKnown RBP8.66□□□□□ -1.02
SF3A3-204ENST00000462258 OR52L1Q8NGH7 329 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 OR4K13Q8NH42 304 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 OR1F12Q8NHA8 337 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 GNPDA2Q8TDQ7 276 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 SLC7A6Q92536 515 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 CCDC124Q96CT7 223 aaKnown RBP8.66□□□□□ -1.02
SF3A3-204ENST00000462258 ELMOD3Q96FG2 381 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 C1orf159Q96HA4 380 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 NMNAT3Q96T66 252 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 MDFIQ99750 246 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 BTBD10Q9BSF8 475 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 HDHD2Q9H0R4 259 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 FN3KQ9H479 309 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 POFUT1Q9H488 388 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 MAGIXQ9H6Y5 334 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 EGLN3Q9H6Z9 239 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 RPRD1BQ9NQG5 326 aaKnown RBP8.66□□□□□ -1.02
SF3A3-204ENST00000462258 CYSLTR2Q9NS75 346 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 TBCCD1Q9NVR7 557 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 PRPF19Q9UMS4 504 aaKnown RBP8.66□□□□□ -1.02
SF3A3-204ENST00000462258 CDH10Q9Y6N8 788 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 FBN1P35555 2871 aaKnown RBP8.66□□□□□ -1.02
SF3A3-204ENST00000462258 COL6A5A8TX70 2615 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 WNT9BO14905 357 aa8.65□□□□□ -1.02
SF3A3-204ENST00000462258 RER1O15258 196 aa8.65□□□□□ -1.02
SF3A3-204ENST00000462258 ADH4P08319 380 aa8.65□□□□□ -1.02
SF3A3-204ENST00000462258 LIPAP38571 399 aa8.65□□□□□ -1.02
SF3A3-204ENST00000462258 CRYBB2P43320 205 aa8.65□□□□□ -1.02
SF3A3-204ENST00000462258 TRIM25Q14258 630 aaKnown RBP8.65□□□□□ -1.02
SF3A3-204ENST00000462258 KCNMB1Q16558 191 aa8.65□□□□□ -1.02
SF3A3-204ENST00000462258 HFEQ30201 348 aa8.65□□□□□ -1.02
SF3A3-204ENST00000462258 CCDC92Q53HC0 331 aaPredicted RBP8.65□□□□□ -1.02
SF3A3-204ENST00000462258 AVPI1Q5T686 147 aa8.65□□□□□ -1.02
SF3A3-204ENST00000462258 RPL13AP3Q6NVV1 102 aa8.65□□□□□ -1.02
SF3A3-204ENST00000462258 GLCCI1Q86VQ1 547 aa8.65□□□□□ -1.02
SF3A3-204ENST00000462258 DHFR2Q86XF0 187 aa8.65□□□□□ -1.02
SF3A3-204ENST00000462258 OR6V1Q8N148 313 aa8.65□□□□□ -1.02
SF3A3-204ENST00000462258 LINC00471Q8N535 108 aa8.65□□□□□ -1.02
SF3A3-204ENST00000462258 SLC26A10Q8NG04 563 aa8.65□□□□□ -1.02
SF3A3-204ENST00000462258 OR4C15Q8NGM1 316 aa8.65□□□□□ -1.02
SF3A3-204ENST00000462258 ASB9Q96DX5 294 aa8.65□□□□□ -1.02
SF3A3-204ENST00000462258 COG8Q96MW5 612 aa8.65□□□□□ -1.02
SF3A3-204ENST00000462258 DCLRE1CQ96SD1 692 aaKnown RBP8.65□□□□□ -1.02
SF3A3-204ENST00000462258 COQ7Q99807 217 aa8.65□□□□□ -1.02
SF3A3-204ENST00000462258 PLA2G12AQ9BZM1 189 aa8.65□□□□□ -1.02
SF3A3-204ENST00000462258 TRIM15Q9C019 465 aa8.65□□□□□ -1.02
SF3A3-204ENST00000462258 TBC1D23Q9NUY8 699 aa8.65□□□□□ -1.02
SF3A3-204ENST00000462258 B9D1Q9UPM9 204 aa8.65□□□□□ -1.02
SF3A3-204ENST00000462258 GRIP1Q9Y3R0 1128 aa8.65□□□□□ -1.02
SF3A3-204ENST00000462258 LHFPL6Q9Y693 200 aa8.65□□□□□ -1.02
SF3A3-204ENST00000462258 CACNG2Q9Y698 323 aa8.65□□□□□ -1.02
SF3A3-204ENST00000462258 OR6C68A6NDL8 312 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 B4DSR2 109 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 FAM157AC9JC47 383 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 J3QW42 95 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 BHLHE40O14503 412 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 CCNB2O95067 398 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 CD55P08174 381 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 DBHP09172 617 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 PCMT1P22061 227 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 TUBG1P23258 451 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 RGS6P49758 472 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 DVL1P1P54792 670 aaPredicted RBP8.64□□□□□ -1.03
SF3A3-204ENST00000462258 MVKQ03426 396 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.64□□□□□ -1.03
SF3A3-204ENST00000462258 DBPQ10586 325 aaPredicted RBP8.64□□□□□ -1.03
SF3A3-204ENST00000462258 COX10Q12887 443 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 PPP1R8Q12972 351 aaKnown RBP8.64□□□□□ -1.03
SF3A3-204ENST00000462258 PSG7Q13046 419 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 SLC35F1Q5T1Q4 408 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 ZNF770Q6IQ21 691 aaPredicted RBP8.64□□□□□ -1.03
SF3A3-204ENST00000462258 CORO6Q6QEF8 472 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 ZBTB46Q86UZ6 589 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 AQP11Q8NBQ7 271 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 GJC3Q8NFK1 279 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 OR52E2Q8NGJ4 325 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms