RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 MRPS18BQ9Y676 258 aaKnown RBP1.97□□□□□ -2.09
HDAC6-212ENST00000461608 PLEKHG2Q9H7P9 1386 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 ATRXP46100 2492 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 MTCL1Q9Y4B5 1905 aaKnown RBP1.96□□□□□ -2.1
HDAC6-212ENST00000461608 IGLV3-16A0A075B6K0 115 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 IGHV5-10-1A0A0J9YXX1 117 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 TMEM120BA0PK00 339 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 PDZK1P1A8MUH7 402 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 XRCC2O43543 280 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 ANGPTL7O43827 346 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 HSBP1O75506 76 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 FCN3O75636 299 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 IFNW1P05000 195 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 RAB4AP20338 218 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 MSR1P21757 451 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 U2AF2P26368 475 aaKnown RBP eCLIP1.96□□□□□ -2.1
HDAC6-212ENST00000461608 CD82P27701 267 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 OR1E1P30953 314 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 CDKN2BP42772 138 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 RPS5P46782 204 aaKnown RBP1.96□□□□□ -2.1
HDAC6-212ENST00000461608 CSNK1A1P48729 337 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 P2RX1P51575 399 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 SYNJ2BPP57105 145 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 DAOAP59103 153 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 UBE2NP61088 152 aaKnown RBP1.96□□□□□ -2.1
HDAC6-212ENST00000461608 PPP1CBP62140 327 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 KDSRQ06136 332 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 ZSCAN26Q16670 478 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 PTPN20Q4JDL3 420 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 HSP90AA4PQ58FG1 418 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 GPR107Q5VW38 600 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 OR52W1Q6IF63 320 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 RWDD4Q6NW29 188 aaKnown RBP1.96□□□□□ -2.1
HDAC6-212ENST00000461608 ULK3Q6PHR2 472 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 ARL9Q6T311 187 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 NPSR1Q6W5P4 371 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 VTCN1Q7Z7D3 282 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 MRPL55Q7Z7F7 128 aaKnown RBP1.96□□□□□ -2.1
HDAC6-212ENST00000461608 SAXO1Q8IYX7 474 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 ZNF786Q8N393 782 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 CBR4Q8N4T8 237 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 INO80EQ8NBZ0 244 aaPredicted RBP1.96□□□□□ -2.1
HDAC6-212ENST00000461608 PROKR2Q8NFJ6 384 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 OR6Q1Q8NGQ2 317 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 OR2A5Q96R48 311 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 GPR21Q99679 349 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 CHAC1Q9BUX1 264 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 SLC7A5P2Q9GIP4 190 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 BLZF1Q9H2G9 400 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 PIGUQ9H490 435 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 SAV1Q9H4B6 383 aaPredicted RBP1.96□□□□□ -2.1
HDAC6-212ENST00000461608 TDRD3Q9H7E2 651 aaKnown RBP1.96□□□□□ -2.1
HDAC6-212ENST00000461608 MRM3Q9HC36 420 aaKnown RBP1.96□□□□□ -2.1
HDAC6-212ENST00000461608 SLC40A1Q9NP59 571 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 DDX19AQ9NUU7 478 aaKnown RBP1.96□□□□□ -2.1
HDAC6-212ENST00000461608 TBX21Q9UL17 535 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 CHTOPQ9Y3Y2 248 aaKnown RBP1.96□□□□□ -2.1
HDAC6-212ENST00000461608 CDC42BPBQ9Y5S2 1711 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 ARHGAP21Q5T5U3 1957 aa1.96□□□□□ -2.1
HDAC6-212ENST00000461608 MROH7-TTC4A0A0A0MT08 1334 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 GAKO14976 1311 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 MN1Q10571 1320 aaPredicted RBP1.95□□□□□ -2.1
HDAC6-212ENST00000461608 TRAV6A0A075B6T7 132 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 IGHV3OR16-9A0A0B4J2B5 98 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 TSPAN11A1L157 253 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 TMX2-CTNND1H3BSU7 103 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 K7EMT4 169 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 MAGEB4O15481 346 aaPredicted RBP1.95□□□□□ -2.1
HDAC6-212ENST00000461608 KRTAP5-8O75690 187 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 RP2O75695 350 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 FLOT1O75955 427 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 HOXC4P09017 264 aaPredicted RBP1.95□□□□□ -2.1
HDAC6-212ENST00000461608 CD3GP09693 182 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 TACSTD2P09758 323 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 CISD3P0C7P0 127 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 UBTFL6P0CB48 400 aaPredicted RBP1.95□□□□□ -2.1
HDAC6-212ENST00000461608 CTRB1P17538 263 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 PSMC3P17980 439 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 ATF6P18850 670 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 GGT1P19440 569 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 CEACAM3P40198 252 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 PEX19P40855 299 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 HCAR3P49019 387 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 CCR6P51684 374 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 UCNP55089 124 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 ZNF121P58317 390 aaPredicted RBP1.95□□□□□ -2.1
HDAC6-212ENST00000461608 RAP1AP62834 184 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 ZNF33AQ06730 810 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 ART3Q13508 389 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 KIR2DS1Q14954 304 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 PON2Q15165 354 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 STK38Q15208 465 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 ORMDL2Q53FV1 153 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 AVPI1Q5T686 147 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 LINC00523Q86TU6 105 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 HORMAD1Q86X24 394 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 Q8N976 141 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 OR52E2Q8NGJ4 325 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 OR10G6Q8NH81 332 aa1.95□□□□□ -2.1
HDAC6-212ENST00000461608 ZNF596Q8TC21 504 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms