RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 TIPRLO75663 272 aa14.48□□□□□ -0.09
TOP3A-202ENST00000461127 PLATP00750 562 aa14.48□□□□□ -0.09
TOP3A-202ENST00000461127 SEMG1P04279 462 aa14.48□□□□□ -0.09
TOP3A-202ENST00000461127 ADH4P08319 380 aa14.48□□□□□ -0.09
TOP3A-202ENST00000461127 CCNOP22674 350 aa14.48□□□□□ -0.09
TOP3A-202ENST00000461127 CD80P33681 288 aa14.48□□□□□ -0.09
TOP3A-202ENST00000461127 BIDP55957 195 aa14.48□□□□□ -0.09
TOP3A-202ENST00000461127 SEC61A1P61619 476 aaKnown RBP14.48□□□□□ -0.09
TOP3A-202ENST00000461127 RIPK1Q13546 671 aa14.48□□□□□ -0.09
TOP3A-202ENST00000461127 LRRN1Q6UXK5 716 aa14.48□□□□□ -0.09
TOP3A-202ENST00000461127 COMTD1Q86VU5 262 aa14.48□□□□□ -0.09
TOP3A-202ENST00000461127 RANBP3LQ86VV4 465 aaPredicted RBP14.48□□□□□ -0.09
TOP3A-202ENST00000461127 LSMEM1Q8N8F7 131 aa14.48□□□□□ -0.09
TOP3A-202ENST00000461127 OR4K5Q8NGD3 323 aa14.48□□□□□ -0.09
TOP3A-202ENST00000461127 IPCEF1Q8WWN9 437 aaPredicted RBP14.48□□□□□ -0.09
TOP3A-202ENST00000461127 TMEM54Q969K7 222 aa14.48□□□□□ -0.09
TOP3A-202ENST00000461127 UPRTQ96BW1 309 aa14.48□□□□□ -0.09
TOP3A-202ENST00000461127 IL1RAPQ9NPH3 570 aa14.48□□□□□ -0.09
TOP3A-202ENST00000461127 EIF3KQ9UBQ5 218 aaKnown RBP14.48□□□□□ -0.09
TOP3A-202ENST00000461127 RNF114Q9Y508 228 aa14.48□□□□□ -0.09
TOP3A-202ENST00000461127 SOX21Q9Y651 276 aaPredicted RBP14.48□□□□□ -0.09
TOP3A-202ENST00000461127 MDFIC2A0A1B0GVS7 189 aa14.47□□□□□ -0.09
TOP3A-202ENST00000461127 ZSCAN5BA6NJL1 495 aa14.47□□□□□ -0.09
TOP3A-202ENST00000461127 GNGT2O14610 69 aa14.47□□□□□ -0.09
TOP3A-202ENST00000461127 SELEP16581 610 aa14.47□□□□□ -0.09
TOP3A-202ENST00000461127 FASP25445 335 aa14.47□□□□□ -0.09
TOP3A-202ENST00000461127 MAGEA2P43356 314 aa14.47□□□□□ -0.09
TOP3A-202ENST00000461127 HSF2Q03933 536 aa14.47□□□□□ -0.09
TOP3A-202ENST00000461127 THEM4Q5T1C6 240 aa14.47□□□□□ -0.09
TOP3A-202ENST00000461127 ULK3Q6PHR2 472 aa14.47□□□□□ -0.09
TOP3A-202ENST00000461127 NHLRC1Q6VVB1 395 aa14.47□□□□□ -0.09
TOP3A-202ENST00000461127 LRRC28Q86X40 367 aaPredicted RBP14.47□□□□□ -0.09
TOP3A-202ENST00000461127 ZNF566Q969W8 418 aa14.47□□□□□ -0.09
TOP3A-202ENST00000461127 ZNF347Q96SE7 839 aa14.47□□□□□ -0.09
TOP3A-202ENST00000461127 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.47□□□□□ -0.09
TOP3A-202ENST00000461127 TMEM106BQ9NUM4 274 aa14.47□□□□□ -0.09
TOP3A-202ENST00000461127 LRCH1Q9Y2L9 728 aa14.47□□□□□ -0.09
TOP3A-202ENST00000461127 ENPP4Q9Y6X5 453 aa14.47□□□□□ -0.09
TOP3A-202ENST00000461127 PLPP3O14495 311 aa14.46□□□□□ -0.09
TOP3A-202ENST00000461127 PIN1P1O15428 100 aa14.46□□□□□ -0.09
TOP3A-202ENST00000461127 DHHO43323 396 aa14.46□□□□□ -0.09
TOP3A-202ENST00000461127 OR6A2O95222 327 aa14.46□□□□□ -0.09
TOP3A-202ENST00000461127 ATP6V1G2O95670 118 aa14.46□□□□□ -0.09
TOP3A-202ENST00000461127 BGLAPP02818 100 aa14.46□□□□□ -0.09
TOP3A-202ENST00000461127 CD55P08174 381 aa14.46□□□□□ -0.09
TOP3A-202ENST00000461127 ADORA3P0DMS8 318 aa14.46□□□□□ -0.09
TOP3A-202ENST00000461127 IFNA8P32881 189 aa14.46□□□□□ -0.09
TOP3A-202ENST00000461127 BTG1P62324 171 aa14.46□□□□□ -0.09
TOP3A-202ENST00000461127 TNFAIP6P98066 277 aaPredicted RBP14.46□□□□□ -0.09
TOP3A-202ENST00000461127 RELBQ01201 579 aa14.46□□□□□ -0.09
TOP3A-202ENST00000461127 DEFB112Q30KQ8 113 aa14.46□□□□□ -0.09
TOP3A-202ENST00000461127 SPATA46Q5T0L3 261 aa14.46□□□□□ -0.09
TOP3A-202ENST00000461127 MBNL2Q5VZF2 373 aaKnown RBP14.46□□□□□ -0.09
TOP3A-202ENST00000461127 WDR88Q6ZMY6 472 aa14.46□□□□□ -0.09
TOP3A-202ENST00000461127 RBM45Q8IUH3 476 aaKnown RBP14.46□□□□□ -0.09
TOP3A-202ENST00000461127 C1orf174Q8IYL3 243 aa14.46□□□□□ -0.09
TOP3A-202ENST00000461127 OR6T1Q8NGN1 323 aa14.46□□□□□ -0.09
TOP3A-202ENST00000461127 OR6X1Q8NH79 312 aa14.46□□□□□ -0.09
TOP3A-202ENST00000461127 FAM110DQ8TAY7 271 aaPredicted RBP14.46□□□□□ -0.09
TOP3A-202ENST00000461127 C7orf34Q96L11 122 aa14.46□□□□□ -0.09
TOP3A-202ENST00000461127 PRDM13Q9H4Q3 707 aa14.46□□□□□ -0.09
TOP3A-202ENST00000461127 MARCH7Q9H992 704 aa14.46□□□□□ -0.09
TOP3A-202ENST00000461127 TCF7L1Q9HCS4 588 aa14.46□□□□□ -0.09
TOP3A-202ENST00000461127 NOX4Q9NPH5 578 aa14.46□□□□□ -0.09
TOP3A-202ENST00000461127 C11orf98E9PRG8 122 aa14.45□□□□□ -0.1
TOP3A-202ENST00000461127 F5H0A9 414 aaPredicted RBP14.45□□□□□ -0.1
TOP3A-202ENST00000461127 TSPAN15O95858 294 aa14.45□□□□□ -0.1
TOP3A-202ENST00000461127 CST1P01037 141 aa14.45□□□□□ -0.1
TOP3A-202ENST00000461127 TNFRSF1AP19438 455 aa14.45□□□□□ -0.1
TOP3A-202ENST00000461127 TNFSF4P23510 183 aa14.45□□□□□ -0.1
TOP3A-202ENST00000461127 MPV17P39210 176 aa14.45□□□□□ -0.1
TOP3A-202ENST00000461127 YAP1P46937 504 aaKnown RBP14.45□□□□□ -0.1
TOP3A-202ENST00000461127 BPIFB3P59826 476 aa14.45□□□□□ -0.1
TOP3A-202ENST00000461127 RPL15P61313 204 aaKnown RBP14.45□□□□□ -0.1
TOP3A-202ENST00000461127 ATP6AP1Q15904 470 aa14.45□□□□□ -0.1
TOP3A-202ENST00000461127 NRN1LQ496H8 165 aa14.45□□□□□ -0.1
TOP3A-202ENST00000461127 LRFN4Q6PJG9 635 aa14.45□□□□□ -0.1
TOP3A-202ENST00000461127 SLC35D2Q76EJ3 337 aa14.45□□□□□ -0.1
TOP3A-202ENST00000461127 PQLC1Q8N2U9 271 aa14.45□□□□□ -0.1
TOP3A-202ENST00000461127 MUC20Q8N307 709 aaPredicted RBP14.45□□□□□ -0.1
TOP3A-202ENST00000461127 TMEM86BQ8N661 226 aa14.45□□□□□ -0.1
TOP3A-202ENST00000461127 OR4D11Q8NGI4 311 aa14.45□□□□□ -0.1
TOP3A-202ENST00000461127 OR10S1Q8NGN2 331 aa14.45□□□□□ -0.1
TOP3A-202ENST00000461127 KLF14Q8TD94 323 aaPredicted RBP14.45□□□□□ -0.1
TOP3A-202ENST00000461127 LRTOMTQ8WZ04 291 aa14.45□□□□□ -0.1
TOP3A-202ENST00000461127 MARS2Q96GW9 593 aaKnown RBP14.45□□□□□ -0.1
TOP3A-202ENST00000461127 SLC25A44Q96H78 314 aaPredicted RBP14.45□□□□□ -0.1
TOP3A-202ENST00000461127 MOGAT1Q96PD6 335 aa14.45□□□□□ -0.1
TOP3A-202ENST00000461127 MCHR1Q99705 422 aa14.45□□□□□ -0.1
TOP3A-202ENST00000461127 KCNN2Q9H2S1 579 aa14.45□□□□□ -0.1
TOP3A-202ENST00000461127 RNPEPL1Q9HAU8 725 aa14.45□□□□□ -0.1
TOP3A-202ENST00000461127 DCAF16Q9NXF7 216 aa14.45□□□□□ -0.1
TOP3A-202ENST00000461127 NDUFAF4Q9P032 175 aa14.45□□□□□ -0.1
TOP3A-202ENST00000461127 DNAJB9Q9UBS3 223 aa14.45□□□□□ -0.1
TOP3A-202ENST00000461127 C3orf80F5H4A9 247 aa14.44□□□□□ -0.1
TOP3A-202ENST00000461127 FMO6PO60774 539 aa14.44□□□□□ -0.1
TOP3A-202ENST00000461127 DIRAS1O95057 198 aa14.44□□□□□ -0.1
TOP3A-202ENST00000461127 MT-ATP6P00846 226 aa14.44□□□□□ -0.1
TOP3A-202ENST00000461127 RHCEP18577 417 aa14.44□□□□□ -0.1
TOP3A-202ENST00000461127 CPT2P23786 658 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms