RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 AQP12BA6NM10 295 aa19.63■□□□□ 0.73
PTPN4-208ENST00000460289 LILRA1O75019 489 aa19.63■□□□□ 0.73
PTPN4-208ENST00000460289 UBOX5O94941 541 aa19.63■□□□□ 0.73
PTPN4-208ENST00000460289 MPV17P39210 176 aa19.63■□□□□ 0.73
PTPN4-208ENST00000460289 ZNF81P51508 661 aa19.63■□□□□ 0.73
PTPN4-208ENST00000460289 CCL8P80075 99 aa19.63■□□□□ 0.73
PTPN4-208ENST00000460289 PPP1R8Q12972 351 aaKnown RBP19.63■□□□□ 0.73
PTPN4-208ENST00000460289 SLC36A3Q495N2 470 aa19.63■□□□□ 0.73
PTPN4-208ENST00000460289 AQP12AQ8IXF9 295 aa19.63■□□□□ 0.73
PTPN4-208ENST00000460289 AQP11Q8NBQ7 271 aa19.63■□□□□ 0.73
PTPN4-208ENST00000460289 OR52E2Q8NGJ4 325 aa19.63■□□□□ 0.73
PTPN4-208ENST00000460289 OR1F12Q8NHA8 337 aa19.63■□□□□ 0.73
PTPN4-208ENST00000460289 IPCEF1Q8WWN9 437 aaPredicted RBP19.63■□□□□ 0.73
PTPN4-208ENST00000460289 DCLRE1CQ96SD1 692 aaKnown RBP19.63■□□□□ 0.73
PTPN4-208ENST00000460289 CHID1Q9BWS9 393 aa19.63■□□□□ 0.73
PTPN4-208ENST00000460289 DECR2Q9NUI1 292 aa19.63■□□□□ 0.73
PTPN4-208ENST00000460289 CGGBP1Q9UFW8 167 aaPredicted RBP19.63■□□□□ 0.73
PTPN4-208ENST00000460289 GRIP1Q9Y3R0 1128 aa19.63■□□□□ 0.73
PTPN4-208ENST00000460289 CHD3Q12873 2000 aaKnown RBP19.63■□□□□ 0.73
PTPN4-208ENST00000460289 OR6C68A6NDL8 312 aa19.62■□□□□ 0.73
PTPN4-208ENST00000460289 OR6C6A6NF89 314 aa19.62■□□□□ 0.73
PTPN4-208ENST00000460289 RER1O15258 196 aa19.62■□□□□ 0.73
PTPN4-208ENST00000460289 NCR1O76036 304 aa19.62■□□□□ 0.73
PTPN4-208ENST00000460289 GAAP10253 952 aa19.62■□□□□ 0.73
PTPN4-208ENST00000460289 GPR6P46095 362 aaPredicted RBP19.62■□□□□ 0.73
PTPN4-208ENST00000460289 TEKQ02763 1124 aa19.62■□□□□ 0.73
PTPN4-208ENST00000460289 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.62■□□□□ 0.73
PTPN4-208ENST00000460289 CCDC92Q53HC0 331 aaPredicted RBP19.62■□□□□ 0.73
PTPN4-208ENST00000460289 SLC35F1Q5T1Q4 408 aa19.62■□□□□ 0.73
PTPN4-208ENST00000460289 OTPQ5XKR4 325 aa19.62■□□□□ 0.73
PTPN4-208ENST00000460289 FAM166AQ6J272 317 aa19.62■□□□□ 0.73
PTPN4-208ENST00000460289 SDR9C7Q8NEX9 313 aa19.62■□□□□ 0.73
PTPN4-208ENST00000460289 DGCR6LQ9BY27 220 aa19.62■□□□□ 0.73
PTPN4-208ENST00000460289 JMJD1CQ15652 2540 aa19.62■□□□□ 0.73
PTPN4-208ENST00000460289 LOC100289279A0A1B0GTE1 492 aa19.61■□□□□ 0.73
PTPN4-208ENST00000460289 LRP5LA4QPB2 252 aa19.61■□□□□ 0.73
PTPN4-208ENST00000460289 BHLHE40O14503 412 aa19.61■□□□□ 0.73
PTPN4-208ENST00000460289 GPANK1O95872 356 aa19.61■□□□□ 0.73
PTPN4-208ENST00000460289 CST1P01037 141 aa19.61■□□□□ 0.73
PTPN4-208ENST00000460289 ZNF16P17020 682 aaPredicted RBP19.61■□□□□ 0.73
PTPN4-208ENST00000460289 MMP15P51511 669 aa19.61■□□□□ 0.73
PTPN4-208ENST00000460289 HIST1H3AP68431 136 aa19.61■□□□□ 0.73
PTPN4-208ENST00000460289 MEP1BQ16820 701 aa19.61■□□□□ 0.73
PTPN4-208ENST00000460289 CHRFAM7AQ494W8 412 aa19.61■□□□□ 0.73
PTPN4-208ENST00000460289 ZMAT1Q5H9K5 638 aa19.61■□□□□ 0.73
PTPN4-208ENST00000460289 FAM209AQ5JX71 171 aa19.61■□□□□ 0.73
PTPN4-208ENST00000460289 HIST2H3PS2Q5TEC6 136 aa19.61■□□□□ 0.73
PTPN4-208ENST00000460289 HIST2H3AQ71DI3 136 aa19.61■□□□□ 0.73
PTPN4-208ENST00000460289 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.61■□□□□ 0.73
PTPN4-208ENST00000460289 SLC26A10Q8NG04 563 aa19.61■□□□□ 0.73
PTPN4-208ENST00000460289 YIPF5Q969M3 257 aa19.61■□□□□ 0.73
PTPN4-208ENST00000460289 MSI2Q96DH6 328 aaKnown RBP19.61■□□□□ 0.73
PTPN4-208ENST00000460289 CDADC1Q9BWV3 514 aa19.61■□□□□ 0.73
PTPN4-208ENST00000460289 HDHD2Q9H0R4 259 aa19.61■□□□□ 0.73
PTPN4-208ENST00000460289 CDC42EP3Q9UKI2 254 aa19.61■□□□□ 0.73
PTPN4-208ENST00000460289 BAIAP2Q9UQB8 552 aa19.61■□□□□ 0.73
PTPN4-208ENST00000460289 LHFPL6Q9Y693 200 aa19.61■□□□□ 0.73
PTPN4-208ENST00000460289 J3QW42 95 aa19.6■□□□□ 0.73
PTPN4-208ENST00000460289 TPD52L2O43399 206 aaKnown RBP19.6■□□□□ 0.73
PTPN4-208ENST00000460289 LMX1BO60663 402 aa19.6■□□□□ 0.73
PTPN4-208ENST00000460289 HLA-DQA2P01906 255 aa19.6■□□□□ 0.73
PTPN4-208ENST00000460289 CRYBB2P43320 205 aa19.6■□□□□ 0.73
PTPN4-208ENST00000460289 RGS6P49758 472 aa19.6■□□□□ 0.73
PTPN4-208ENST00000460289 COX10Q12887 443 aa19.6■□□□□ 0.73
PTPN4-208ENST00000460289 PRIMA1Q86XR5 153 aa19.6■□□□□ 0.73
PTPN4-208ENST00000460289 ADGRG5Q8IZF4 528 aa19.6■□□□□ 0.73
PTPN4-208ENST00000460289 DIRC2Q96SL1 478 aa19.6■□□□□ 0.73
PTPN4-208ENST00000460289 TSSK6Q9BXA6 273 aa19.6■□□□□ 0.73
PTPN4-208ENST00000460289 PLA2G12AQ9BZM1 189 aa19.6■□□□□ 0.73
PTPN4-208ENST00000460289 ZNF275Q9NSD4 429 aaPredicted RBP19.6■□□□□ 0.73
PTPN4-208ENST00000460289 TBC1D23Q9NUY8 699 aa19.6■□□□□ 0.73
PTPN4-208ENST00000460289 VNN3Q9NY84 501 aa19.6■□□□□ 0.73
PTPN4-208ENST00000460289 KLHL21Q9UJP4 597 aa19.6■□□□□ 0.73
PTPN4-208ENST00000460289 ZDHHC8Q9ULC8 765 aa19.6■□□□□ 0.73
PTPN4-208ENST00000460289 KCNS2Q9ULS6 477 aa19.6■□□□□ 0.73
PTPN4-208ENST00000460289 DHRS12A0PJE2 317 aa19.59■□□□□ 0.73
PTPN4-208ENST00000460289 GNGT2O14610 69 aa19.59■□□□□ 0.73
PTPN4-208ENST00000460289 TGFAP01135 160 aa19.59■□□□□ 0.73
PTPN4-208ENST00000460289 TFP02787 698 aa19.59■□□□□ 0.73
PTPN4-208ENST00000460289 TRIP10Q15642 601 aa19.59■□□□□ 0.73
PTPN4-208ENST00000460289 TSTQ16762 297 aaKnown RBP19.59■□□□□ 0.73
PTPN4-208ENST00000460289 LNX2Q8N448 690 aa19.59■□□□□ 0.73
PTPN4-208ENST00000460289 OR10G2Q8NGC3 310 aa19.59■□□□□ 0.73
PTPN4-208ENST00000460289 OR5L1Q8NGL2 311 aa19.59■□□□□ 0.73
PTPN4-208ENST00000460289 OR2AJ1Q8NGZ0 328 aa19.59■□□□□ 0.73
PTPN4-208ENST00000460289 OR2T4Q8NH00 348 aa19.59■□□□□ 0.73
PTPN4-208ENST00000460289 CANT1Q8WVQ1 401 aa19.59■□□□□ 0.73
PTPN4-208ENST00000460289 SLC7A6Q92536 515 aa19.59■□□□□ 0.73
PTPN4-208ENST00000460289 PTP4A1Q93096 173 aa19.59■□□□□ 0.73
PTPN4-208ENST00000460289 SLC7A6OSQ96CW6 309 aaPredicted RBP19.59■□□□□ 0.73
PTPN4-208ENST00000460289 COQ7Q99807 217 aa19.59■□□□□ 0.73
PTPN4-208ENST00000460289 EGLN1Q9GZT9 426 aa19.59■□□□□ 0.73
PTPN4-208ENST00000460289 SAP30LQ9HAJ7 183 aa19.59■□□□□ 0.73
PTPN4-208ENST00000460289 LPAR3Q9UBY5 353 aa19.59■□□□□ 0.73
PTPN4-208ENST00000460289 STARD10Q9Y365 291 aa19.59■□□□□ 0.73
PTPN4-208ENST00000460289 IGHV1-69-2A0A0G2JMI3 117 aa19.58■□□□□ 0.72
PTPN4-208ENST00000460289 PPIHO43447 177 aaKnown RBP19.58■□□□□ 0.72
PTPN4-208ENST00000460289 SPRY3O43610 288 aa19.58■□□□□ 0.72
PTPN4-208ENST00000460289 TIMM8AO60220 97 aaPredicted RBP19.58■□□□□ 0.72
PTPN4-208ENST00000460289 RP2O75695 350 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms