RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 MARCH7Q9H992 704 aa9.39□□□□□ -0.91
CCDC12-204ENST00000460035 RNPEPL1Q9HAU8 725 aa9.39□□□□□ -0.91
CCDC12-204ENST00000460035 FAM118AQ9NWS6 357 aa9.39□□□□□ -0.91
CCDC12-204ENST00000460035 SMPD3Q9NY59 655 aaPredicted RBP9.39□□□□□ -0.91
CCDC12-204ENST00000460035 CYB5R1Q9UHQ9 305 aa9.39□□□□□ -0.91
CCDC12-204ENST00000460035 ST6GALNAC2Q9UJ37 374 aa9.39□□□□□ -0.91
CCDC12-204ENST00000460035 GDF2Q9UK05 429 aaPredicted RBP9.39□□□□□ -0.91
CCDC12-204ENST00000460035 NDRG4Q9ULP0 352 aaKnown RBP9.39□□□□□ -0.91
CCDC12-204ENST00000460035 LAMP3Q9UQV4 416 aa9.39□□□□□ -0.91
CCDC12-204ENST00000460035 GRIP1Q9Y3R0 1128 aa9.39□□□□□ -0.91
CCDC12-204ENST00000460035 COMMD3-BMI1R4GMX3 469 aa9.39□□□□□ -0.91
CCDC12-204ENST00000460035 MAST4O15021 2626 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 LOC100130705A0A1B0GUX0 176 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 RAF1P04049 648 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 LCKP06239 509 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 COX5BP10606 129 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 APOBEC3AP31941 199 aaPredicted RBP9.38□□□□□ -0.91
CCDC12-204ENST00000460035 TTKP33981 857 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 THBS4P35443 961 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 SERPINF1P36955 418 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 RAD52P43351 418 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 UCP2P55851 309 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 EIF2B1Q14232 305 aaKnown RBP9.38□□□□□ -0.91
CCDC12-204ENST00000460035 RAB35Q15286 201 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 TAF13Q15543 124 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 PCK2Q16822 640 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 ELFN2Q5R3F8 820 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 OGFRL1Q5TC84 451 aaPredicted RBP9.38□□□□□ -0.91
CCDC12-204ENST00000460035 AGAP6Q5VW22 663 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 NXNL2Q5VZ03 156 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 ZNF544Q6NX49 715 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 PAMR1Q6UXH9 720 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 CFAP77Q6ZQR2 320 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 SHFQ7M4L6 423 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 DCXRQ7Z4W1 244 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 NUP37Q8NFH4 326 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 OR8J1Q8NGP2 316 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 TRUB1Q8WWH5 349 aaKnown RBP9.38□□□□□ -0.91
CCDC12-204ENST00000460035 CYGBQ8WWM9 190 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 SLC7A6Q92536 515 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 CCL19Q99731 98 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 VCXQ9H320 206 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 CA10Q9NS85 328 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 CENPMQ9NSP4 180 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 FAIMQ9NVQ4 179 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 ATPIF1Q9UII2 106 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 CMAHPQ9Y471 501 aa9.38□□□□□ -0.91
CCDC12-204ENST00000460035 CCDC182A6NF36 153 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 OR6C6A6NF89 314 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 F5H5K5 113 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 SYNGR3O43761 229 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 GPRIN2O60269 458 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 SELENOFO60613 162 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 ICMTO60725 284 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 ATE1O95260 518 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 SOD3P08294 240 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 MRPL3P09001 348 aaKnown RBP9.37□□□□□ -0.91
CCDC12-204ENST00000460035 OR4A8P0C604 315 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 GLRXP35754 106 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 NAA10P41227 235 aaPredicted RBP9.37□□□□□ -0.91
CCDC12-204ENST00000460035 NKX6-1P78426 367 aaPredicted RBP9.37□□□□□ -0.91
CCDC12-204ENST00000460035 ECH1Q13011 328 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 TEX30Q5JUR7 227 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 AADACL4Q5VUY2 407 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 ARL9Q6T311 187 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 UNQ6126/PRO20091Q6UXV3 157 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 SPATC1Q76KD6 591 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 DPY19L4Q7Z388 723 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 MUC15Q8N387 334 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 DHRSXQ8N5I4 330 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 THEM6Q8WUY1 208 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 TMEM171Q8WVE6 324 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 PIGTQ969N2 578 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 MAP6Q96JE9 813 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 C4orf45Q96LM5 186 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 ZNF582Q96NG8 517 aaPredicted RBP9.37□□□□□ -0.91
CCDC12-204ENST00000460035 ATF6BQ99941 703 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 HDHD2Q9H0R4 259 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 DNAJC27Q9NZQ0 273 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 ITGB1BP2Q9UKP3 347 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 FZR1Q9UM11 496 aa9.37□□□□□ -0.91
CCDC12-204ENST00000460035 SLC22A31A6NKX4 558 aa9.36□□□□□ -0.91
CCDC12-204ENST00000460035 DLGAP1O14490 977 aa9.36□□□□□ -0.91
CCDC12-204ENST00000460035 SLC16A6O15403 523 aa9.36□□□□□ -0.91
CCDC12-204ENST00000460035 RRP9O43818 475 aaKnown RBP9.36□□□□□ -0.91
CCDC12-204ENST00000460035 ABHD16AO95870 558 aa9.36□□□□□ -0.91
CCDC12-204ENST00000460035 NGFP01138 241 aa9.36□□□□□ -0.91
CCDC12-204ENST00000460035 DBHP09172 617 aa9.36□□□□□ -0.91
CCDC12-204ENST00000460035 DANCRP0C864 163 aa9.36□□□□□ -0.91
CCDC12-204ENST00000460035 PSKH1P11801 424 aa9.36□□□□□ -0.91
CCDC12-204ENST00000460035 CD53P19397 219 aa9.36□□□□□ -0.91
CCDC12-204ENST00000460035 PCSK6P29122 969 aa9.36□□□□□ -0.91
CCDC12-204ENST00000460035 ATP6V1E1P36543 226 aa9.36□□□□□ -0.91
CCDC12-204ENST00000460035 WNT5AP41221 380 aa9.36□□□□□ -0.91
CCDC12-204ENST00000460035 HCCSP53701 268 aa9.36□□□□□ -0.91
CCDC12-204ENST00000460035 RPS23P62266 143 aaKnown RBP9.36□□□□□ -0.91
CCDC12-204ENST00000460035 SNRPGP62308 76 aaKnown RBP9.36□□□□□ -0.91
CCDC12-204ENST00000460035 RIPK1Q13546 671 aa9.36□□□□□ -0.91
CCDC12-204ENST00000460035 ADIPOQQ15848 244 aa9.36□□□□□ -0.91
CCDC12-204ENST00000460035 TTC23Q5W5X9 447 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms