RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 HTR2CP28335 458 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 CD34P28906 385 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 CCKBRP32239 447 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 GNALP38405 381 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 DCDP81605 110 aaKnown RBP7.64□□□□□ -1.19
VPS50-208ENST00000458707 SIGLEC14Q08ET2 396 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 FUT7Q11130 342 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 SKP2Q13309 424 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 MICBQ29980 383 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 ALG11Q2TAA5 492 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 LBHQ53QV2 105 aaPredicted RBP7.64□□□□□ -1.19
VPS50-208ENST00000458707 SAPCD1Q5SSQ6 148 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 PHF19Q5T6S3 580 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 TMEM225Q6GV28 225 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 LIN54Q6MZP7 749 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 ZNF813Q6ZN06 617 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 SLC25A42Q86VD7 318 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 SVBPQ8N300 66 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 STOML3Q8TAV4 291 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 ELP5Q8TE02 316 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 RNF128Q8TEB7 428 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 ASB17Q8WXJ9 295 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 ELSPBP1Q96BH3 223 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 WDR92Q96MX6 357 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 SEMA6CQ9H3T2 930 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 IL23AQ9NPF7 189 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 PRMT8Q9NR22 394 aaPredicted RBP7.64□□□□□ -1.19
VPS50-208ENST00000458707 KCNG2Q9UJ96 466 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 CLDN16Q9Y5I7 305 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 CHD7Q9P2D1 2997 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 EXPH5Q8NEV8 1989 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 TBC1D3DA0A087WVF3 549 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 NUDT19A8MXV4 375 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 ZNF736B4DX44 427 aaPredicted RBP7.64□□□□□ -1.19
VPS50-208ENST00000458707 TBC1D3LB9A6J9 549 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 H7C1C5 153 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 H7C2Y5 167 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 M0QYG6 137 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 ALOX12BO75342 701 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 CYB5AP00167 134 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 TBC1D3HP0C7X1 549 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 RORAP35398 523 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 DLSTP36957 453 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 CASRP41180 1078 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 LCN6P62502 163 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 ROM1Q03395 351 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 MEF2DQ14814 521 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 TCEA2Q15560 299 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 INPP5JQ15735 1006 aaPredicted RBP7.64□□□□□ -1.19
VPS50-208ENST00000458707 SWI5Q1ZZU3 235 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 ODF4Q2M2E3 257 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 DHRS7BQ6IAN0 325 aaPredicted RBP7.64□□□□□ -1.19
VPS50-208ENST00000458707 TANGO2Q6ICL3 276 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 TBC1D3CQ6IPX1 549 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 FAHD2BQ6P2I3 314 aaPredicted RBP7.64□□□□□ -1.19
VPS50-208ENST00000458707 LRRC69Q6ZNQ3 347 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 NDUFAF7Q7L592 441 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 TAF8Q7Z7C8 310 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 TMED4Q7Z7H5 227 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 LYG2Q86SG7 212 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 ADGRE4PQ86SQ3 457 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 ZNF679Q8IYX0 411 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 TBC1D3Q8IZP1 549 aaPredicted RBP7.64□□□□□ -1.19
VPS50-208ENST00000458707 BPIFB2Q8N4F0 458 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 C10orf53Q8N6V4 93 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 C12orf76Q8N812 135 aaPredicted RBP7.64□□□□□ -1.19
VPS50-208ENST00000458707 ZDHHC22Q8N966 263 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 ZSCAN1Q8NBB4 408 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 OR1M1Q8NGA1 313 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 OR1S2Q8NGQ3 325 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 OR9A4Q8NGU2 314 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 C16orf52Q8NHV5 167 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 NANPQ8TBE9 248 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 PPP1R1CQ8WVI7 109 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 ASB5Q8WWX0 329 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 ZBTB8AQ96BR9 441 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 FAHD2AQ96GK7 314 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 ZNF587Q96SQ5 575 aaPredicted RBP7.64□□□□□ -1.19
VPS50-208ENST00000458707 SLC6A7Q99884 636 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 ZNF471Q9BX82 626 aaPredicted RBP7.64□□□□□ -1.19
VPS50-208ENST00000458707 SYT4Q9H2B2 425 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 ELOVL3Q9HB03 270 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 TMEM100Q9NV29 134 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 MSRAQ9UJ68 235 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 FBXO4Q9UKT5 387 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 PCDHB10Q9UN67 800 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 VSIG4Q9Y279 399 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 CARHSP1Q9Y2V2 147 aaKnown RBP7.64□□□□□ -1.19
VPS50-208ENST00000458707 DISC1C4P0D8 188 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 C5orf67F2Z3F1 127 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 F8VVB4 439 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 F8VWA3 439 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 CLDN4O14493 209 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 TNFRSF10CO14798 259 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 OIP5O43482 229 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 HCRTR1O43613 425 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 NUDT21O43809 227 aaKnown RBP7.63□□□□□ -1.19
VPS50-208ENST00000458707 PNPP00491 289 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 HLA-AP01891 365 aaKnown RBP7.63□□□□□ -1.19
VPS50-208ENST00000458707 ACAA1P09110 424 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms