RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 DNASE1L1P49184 302 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 ARRB1P49407 418 aaPredicted RBP12.66□□□□□ -0.38
SCFD1-203ENST00000458591 TAF13Q15543 124 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 C3orf33Q6P1S2 294 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 FDX2Q6P4F2 183 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 RHOUQ7L0Q8 258 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 ZNF546Q86UE3 836 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 OR6K3Q8NGY3 331 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 MRGPRFQ96AM1 343 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 EMC6Q9BV81 110 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 TXNIPQ9H3M7 391 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 HRH3Q9Y5N1 445 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 TMEM131Q92545 1883 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 IGKV3D-11A0A0A0MRZ8 115 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 RFPL4AA6NLU0 287 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 RFPL4AL1F8VTS6 287 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 UBBP0CG47 229 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 UBCP0CG48 685 aaKnown RBP12.66□□□□□ -0.38
SCFD1-203ENST00000458591 OR1D5P58170 312 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 TAS2R19P59542 299 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 RPS27AP62979 156 aaKnown RBP12.66□□□□□ -0.38
SCFD1-203ENST00000458591 UBA52P62987 128 aaKnown RBP12.66□□□□□ -0.38
SCFD1-203ENST00000458591 DHRS2Q13268 280 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 GLT8D1Q68CQ7 371 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 BEST3Q8N1M1 668 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 OR1L3Q8NH93 324 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 CCDC107Q8WV48 283 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 FBXW5Q969U6 566 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 MRPS24Q96EL2 167 aaKnown RBP12.66□□□□□ -0.38
SCFD1-203ENST00000458591 SPACA5Q96QH8 159 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 SLC25A32Q9H2D1 315 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 C1orf198Q9H425 327 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 TMEM185BQ9H7F4 350 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 PTGES2Q9H7Z7 377 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 G6PC2Q9NQR9 355 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 UPB1Q9UBR1 384 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 SLC5A6Q9Y289 635 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 NUP210LQ5VU65 1888 aa12.66□□□□□ -0.38
SCFD1-203ENST00000458591 PHYHO14832 338 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 NPIPB7O75200 414 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 SRSF10O75494 262 aaKnown RBP12.65□□□□□ -0.38
SCFD1-203ENST00000458591 DXOO77932 396 aaKnown RBP12.65□□□□□ -0.38
SCFD1-203ENST00000458591 HPP00738 406 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 AVPR2P30518 371 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 LTBRP36941 435 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 HLA-DQA1Q5Y7H0 255 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 FAM219AQ8IW50 185 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 OR52N5Q8NH56 324 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 ADAMTS18Q8TE60 1221 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 NUDCD2Q8WVJ2 157 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 THRSPQ92748 146 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 NUDT22Q9BRQ3 303 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 SOX7Q9BT81 388 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 WWTR1Q9GZV5 400 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 SLC6A15Q9H2J7 730 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 VSX1Q9NZR4 365 aaPredicted RBP12.65□□□□□ -0.38
SCFD1-203ENST00000458591 BLACEA4D250 179 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 FAM25EA8MYX2 175 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 ZNF736B4DX44 427 aaPredicted RBP12.65□□□□□ -0.38
SCFD1-203ENST00000458591 ALG1L2C9J202 215 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 H3BMH7 237 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 APOC3P02656 99 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 PGCP20142 388 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 FASLGP48023 281 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 ROM1Q03395 351 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 COL13A1Q5TAT6 717 aaPredicted RBP12.65□□□□□ -0.38
SCFD1-203ENST00000458591 TMEM229BQ8NBD8 167 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 PXT1Q8NFP0 134 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 ST8SIA2Q92186 375 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 FGGYQ96C11 551 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 ZC3H10Q96K80 434 aaKnown RBP12.65□□□□□ -0.38
SCFD1-203ENST00000458591 CNTD2Q9H8S5 307 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 OR52A1Q9UKL2 312 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 MKL2Q9ULH7 1088 aa12.65□□□□□ -0.38
SCFD1-203ENST00000458591 NOP16Q9Y3C1 178 aaKnown RBP12.65□□□□□ -0.38
SCFD1-203ENST00000458591 OR5H14A6NHG9 310 aa12.64□□□□□ -0.39
SCFD1-203ENST00000458591 MS4A18H0YCH9 400 aa12.64□□□□□ -0.39
SCFD1-203ENST00000458591 H3BUI4 141 aa12.64□□□□□ -0.39
SCFD1-203ENST00000458591 AGTR1P30556 359 aa12.64□□□□□ -0.39
SCFD1-203ENST00000458591 SLC6A8P48029 635 aa12.64□□□□□ -0.39
SCFD1-203ENST00000458591 BLKP51451 505 aa12.64□□□□□ -0.39
SCFD1-203ENST00000458591 CCR5P51681 352 aa12.64□□□□□ -0.39
SCFD1-203ENST00000458591 LUMP51884 338 aaPredicted RBP12.64□□□□□ -0.39
SCFD1-203ENST00000458591 LBX1P52954 281 aa12.64□□□□□ -0.39
SCFD1-203ENST00000458591 ATP1B3P54709 279 aa12.64□□□□□ -0.39
SCFD1-203ENST00000458591 CFHR1Q03591 330 aa12.64□□□□□ -0.39
SCFD1-203ENST00000458591 SSBP1Q04837 148 aaKnown RBP12.64□□□□□ -0.39
SCFD1-203ENST00000458591 MS4A18Q3C1V0 323 aa12.64□□□□□ -0.39
SCFD1-203ENST00000458591 CDNFQ49AH0 187 aa12.64□□□□□ -0.39
SCFD1-203ENST00000458591 ELP2Q6IA86 826 aa12.64□□□□□ -0.39
SCFD1-203ENST00000458591 KCTD18Q6PI47 426 aaPredicted RBP12.64□□□□□ -0.39
SCFD1-203ENST00000458591 FJX1Q86VR8 437 aa12.64□□□□□ -0.39
SCFD1-203ENST00000458591 PAQR4Q8N4S7 273 aaPredicted RBP12.64□□□□□ -0.39
SCFD1-203ENST00000458591 CHST4Q8NCG5 386 aa12.64□□□□□ -0.39
SCFD1-203ENST00000458591 OR52N4Q8NGI2 321 aa12.64□□□□□ -0.39
SCFD1-203ENST00000458591 OR2I1PQ8NGU4 316 aa12.64□□□□□ -0.39
SCFD1-203ENST00000458591 ASB17Q8WXJ9 295 aa12.64□□□□□ -0.39
SCFD1-203ENST00000458591 IFT46Q9NQC8 304 aa12.64□□□□□ -0.39
SCFD1-203ENST00000458591 CKLFQ9UBR5 152 aa12.64□□□□□ -0.39
SCFD1-203ENST00000458591 VDAC3Q9Y277 283 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms