RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 OR8G3PP0DMU2 310 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 NPR2P20594 1047 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 CFL1P23528 166 aaKnown RBP7.91□□□□□ -1.14
VPS50-207ENST00000458530 S100A5P33763 92 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 RORCP51449 518 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 SLC3A1Q07837 685 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 ZNF404Q494X3 552 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 YIF1BQ5BJH7 314 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 ZNF684Q5T5D7 378 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 RPUSD3Q6P087 351 aaKnown RBP7.91□□□□□ -1.14
VPS50-207ENST00000458530 FDX2Q6P4F2 183 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 KLHL24Q6TFL4 600 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 LYPD4Q6UWN0 246 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 FOXL2NBQ6ZUU3 175 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.91□□□□□ -1.14
VPS50-207ENST00000458530 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.91□□□□□ -1.14
VPS50-207ENST00000458530 CROCCP3Q8IVE0 287 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 OR5AK2Q8NH90 309 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 MCFD2Q8NI22 146 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 C11orf40Q8WZ69 217 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 ROBO4Q8WZ75 1007 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 TMEM203Q969S6 136 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 ZNF385AQ96PM9 386 aaKnown RBP7.91□□□□□ -1.14
VPS50-207ENST00000458530 TIMP4Q99727 224 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 WACQ9BTA9 647 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 ABHD6Q9BV23 337 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 TTTY10Q9BZA0 68 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 DEFB127Q9H1M4 99 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 MMP27Q9H306 513 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 NELFAQ9H3P2 528 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 MOB1AQ9H8S9 216 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 POLE4Q9NR33 117 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 GLRX2Q9NS18 164 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 MRM2Q9UI43 246 aaKnown RBP7.91□□□□□ -1.14
VPS50-207ENST00000458530 ST6GALNAC2Q9UJ37 374 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 FOXD3Q9UJU5 478 aaPredicted RBP7.91□□□□□ -1.14
VPS50-207ENST00000458530 CAMK2AQ9UQM7 478 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 NOSIPQ9Y314 301 aaKnown RBP7.91□□□□□ -1.14
VPS50-207ENST00000458530 A0A1B0GVC2 190 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 OR14I1A6ND48 311 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 SLC22A20A6NK97 555 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 ZNF878C9JN71 531 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 H0YC42 278 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 CASKO14936 926 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 MRPL33O75394 65 aaKnown RBP7.9□□□□□ -1.14
VPS50-207ENST00000458530 FARS2O95363 451 aaKnown RBP7.9□□□□□ -1.14
VPS50-207ENST00000458530 ABHD16AO95870 558 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 APOC1P02654 83 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 H2BFMP0C1H6 154 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 DCTDP32321 178 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 PEX19P40855 299 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 MTNR1BP49286 362 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 CCR9P51686 369 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 HCCSP53701 268 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 GRB2P62993 217 aaKnown RBP7.9□□□□□ -1.14
VPS50-207ENST00000458530 MRPS34P82930 218 aaKnown RBP7.9□□□□□ -1.14
VPS50-207ENST00000458530 FABP5Q01469 135 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 ALKBH1Q13686 389 aaKnown RBP7.9□□□□□ -1.14
VPS50-207ENST00000458530 TAF13Q15543 124 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 ETFDHQ16134 617 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 MEP1BQ16820 701 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 NRN1LQ496H8 165 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 LIPNQ5VXI9 398 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 C22orf42Q6IC83 251 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 Q6ZS92 163 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 P4HA3Q7Z4N8 544 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 DCXRQ7Z4W1 244 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 TPRA1Q86W33 373 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 RFLNBQ8N5W9 214 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 ZNF676Q8N7Q3 588 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 RPS4Y2Q8TD47 263 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 SMAP2Q8WU79 429 aaPredicted RBP7.9□□□□□ -1.14
VPS50-207ENST00000458530 ZFAND2BQ8WV99 257 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 WDYHV1Q96HA8 205 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 ZNF845Q96IR2 970 aaPredicted RBP7.9□□□□□ -1.14
VPS50-207ENST00000458530 TM9SF2Q99805 663 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 LINC00470Q9BZP3 86 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 WDR12Q9GZL7 423 aaKnown RBP7.9□□□□□ -1.14
VPS50-207ENST00000458530 PRDM14Q9GZV8 571 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 SLCO5A1Q9H2Y9 848 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 BCO1Q9HAY6 547 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 ELOVL3Q9HB03 270 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 HMG20AQ9NP66 347 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 CYB5R1Q9UHQ9 305 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 ERRFI1Q9UJM3 462 aaPredicted RBP7.9□□□□□ -1.14
VPS50-207ENST00000458530 B3GNT3Q9Y2A9 372 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 KLHDC2Q9Y2U9 406 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 ZNF281Q9Y2X9 895 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 PEX16Q9Y5Y5 336 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 CSMD2Q7Z408 3487 aa7.9□□□□□ -1.14
VPS50-207ENST00000458530 ZNF587BE7ETH6 402 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 E9PI62 339 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 LOC110117498-PIK3R3F6TDL0 507 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 PDCD5O14737 125 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 TMEM127O75204 238 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 UPK3AO75631 287 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 RPP14O95059 124 aaKnown RBP7.89□□□□□ -1.15
VPS50-207ENST00000458530 CDRT1O95170 752 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 GPANK1O95872 356 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 IL2RAP01589 272 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms