RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 OR5V1Q9UGF6 321 aa18.12■□□□□ 0.49
CPNE1-220ENST00000458038 ATPIF1Q9UII2 106 aa18.12■□□□□ 0.49
CPNE1-220ENST00000458038 STARD10Q9Y365 291 aa18.12■□□□□ 0.49
CPNE1-220ENST00000458038 POM121CA8CG34 1229 aa18.11■□□□□ 0.49
CPNE1-220ENST00000458038 CLDN34H7C241 214 aa18.11■□□□□ 0.49
CPNE1-220ENST00000458038 TROVE2P10155 538 aaKnown RBP eCLIP18.11■□□□□ 0.49
CPNE1-220ENST00000458038 LSM6P62312 80 aaKnown RBP18.11■□□□□ 0.49
CPNE1-220ENST00000458038 BAMBIQ13145 260 aa18.11■□□□□ 0.49
CPNE1-220ENST00000458038 ZBED5Q49AG3 693 aa18.11■□□□□ 0.49
CPNE1-220ENST00000458038 ZNF730Q6ZMV8 503 aa18.11■□□□□ 0.49
CPNE1-220ENST00000458038 TMPRSS11FQ6ZWK6 438 aa18.11■□□□□ 0.49
CPNE1-220ENST00000458038 VASH1Q7L8A9 365 aaPredicted RBP18.11■□□□□ 0.49
CPNE1-220ENST00000458038 RRM2BQ7LG56 351 aa18.11■□□□□ 0.49
CPNE1-220ENST00000458038 OR5L1Q8NGL2 311 aa18.11■□□□□ 0.49
CPNE1-220ENST00000458038 ITLN1Q8WWA0 313 aa18.11■□□□□ 0.49
CPNE1-220ENST00000458038 SIGLEC11Q96RL6 698 aa18.11■□□□□ 0.49
CPNE1-220ENST00000458038 EMC7Q9NPA0 242 aa18.11■□□□□ 0.49
CPNE1-220ENST00000458038 TEX13CA0A0J9YWL9 993 aa18.1■□□□□ 0.49
CPNE1-220ENST00000458038 PRSS37A4D1T9 235 aa18.1■□□□□ 0.49
CPNE1-220ENST00000458038 DNAJC9-AS1A6NH13 148 aa18.1■□□□□ 0.49
CPNE1-220ENST00000458038 TMEM178BH3BS89 294 aa18.1■□□□□ 0.49
CPNE1-220ENST00000458038 SCG5P05408 212 aa18.1■□□□□ 0.49
CPNE1-220ENST00000458038 MTNR1AP48039 350 aa18.1■□□□□ 0.49
CPNE1-220ENST00000458038 IL13RA1P78552 427 aa18.1■□□□□ 0.49
CPNE1-220ENST00000458038 PAX8Q06710 450 aa18.1■□□□□ 0.49
CPNE1-220ENST00000458038 KLF17Q5JT82 389 aaPredicted RBP18.1■□□□□ 0.49
CPNE1-220ENST00000458038 MBOAT2Q6ZWT7 520 aa18.1■□□□□ 0.49
CPNE1-220ENST00000458038 HDXQ7Z353 690 aa18.1■□□□□ 0.49
CPNE1-220ENST00000458038 ARPINQ7Z6K5 226 aa18.1■□□□□ 0.49
CPNE1-220ENST00000458038 OR2V2Q96R30 315 aa18.1■□□□□ 0.49
CPNE1-220ENST00000458038 MS4A7Q9GZW8 240 aaPredicted RBP18.1■□□□□ 0.49
CPNE1-220ENST00000458038 VIPAS39Q9H9C1 493 aa18.1■□□□□ 0.49
CPNE1-220ENST00000458038 TMEM5Q9Y2B1 443 aa18.1■□□□□ 0.49
CPNE1-220ENST00000458038 FSTL3O95633 263 aa18.09■□□□□ 0.49
CPNE1-220ENST00000458038 RNASE1P07998 156 aaKnown RBP18.09■□□□□ 0.49
CPNE1-220ENST00000458038 GPR139Q6DWJ6 353 aa18.09■□□□□ 0.49
CPNE1-220ENST00000458038 LRRN1Q6UXK5 716 aa18.09■□□□□ 0.49
CPNE1-220ENST00000458038 C9orf139Q6ZV77 190 aa18.09■□□□□ 0.49
CPNE1-220ENST00000458038 GLB1L2Q8IW92 636 aa18.09■□□□□ 0.49
CPNE1-220ENST00000458038 OR13C2Q8NGS9 318 aa18.09■□□□□ 0.49
CPNE1-220ENST00000458038 OR13G1Q8NGZ3 307 aa18.09■□□□□ 0.49
CPNE1-220ENST00000458038 RASD2Q96D21 266 aa18.09■□□□□ 0.49
CPNE1-220ENST00000458038 ZNF570Q96NI8 536 aa18.09■□□□□ 0.49
CPNE1-220ENST00000458038 POFUT1Q9H488 388 aa18.09■□□□□ 0.49
CPNE1-220ENST00000458038 ANKRD19PQ9H560 264 aa18.09■□□□□ 0.49
CPNE1-220ENST00000458038 GCM1Q9NP62 436 aa18.09■□□□□ 0.49
CPNE1-220ENST00000458038 SAR1AQ9NR31 198 aa18.09■□□□□ 0.49
CPNE1-220ENST00000458038 MIOXQ9UGB7 285 aa18.09■□□□□ 0.49
CPNE1-220ENST00000458038 A0A087WUU8 490 aa18.08■□□□□ 0.48
CPNE1-220ENST00000458038 LOC100653049A0A140TA62 436 aa18.08■□□□□ 0.48
CPNE1-220ENST00000458038 OR6C6A6NF89 314 aa18.08■□□□□ 0.48
CPNE1-220ENST00000458038 H7C1C5 153 aa18.08■□□□□ 0.48
CPNE1-220ENST00000458038 FFAR1O14842 300 aa18.08■□□□□ 0.48
CPNE1-220ENST00000458038 KRT34O76011 436 aa18.08■□□□□ 0.48
CPNE1-220ENST00000458038 WNT2P09544 360 aa18.08■□□□□ 0.48
CPNE1-220ENST00000458038 SRP9P49458 86 aaKnown RBP18.08■□□□□ 0.48
CPNE1-220ENST00000458038 SEC61A1P61619 476 aaKnown RBP18.08■□□□□ 0.48
CPNE1-220ENST00000458038 LCN6P62502 163 aa18.08■□□□□ 0.48
CPNE1-220ENST00000458038 BTNL3Q6UXE8 466 aa18.08■□□□□ 0.48
CPNE1-220ENST00000458038 FBXW12Q6X9E4 464 aa18.08■□□□□ 0.48
CPNE1-220ENST00000458038 ATG16L2Q8NAA4 619 aa18.08■□□□□ 0.48
CPNE1-220ENST00000458038 OR52E2Q8NGJ4 325 aa18.08■□□□□ 0.48
CPNE1-220ENST00000458038 OR1F12Q8NHA8 337 aa18.08■□□□□ 0.48
CPNE1-220ENST00000458038 PLEKHA8Q96JA3 519 aa18.08■□□□□ 0.48
CPNE1-220ENST00000458038 Q96M85 177 aa18.08■□□□□ 0.48
CPNE1-220ENST00000458038 SSBP3Q9BWW4 388 aaPredicted RBP18.08■□□□□ 0.48
CPNE1-220ENST00000458038 RHCGQ9UBD6 479 aa18.08■□□□□ 0.48
CPNE1-220ENST00000458038 ADAM18Q9Y3Q7 739 aa18.08■□□□□ 0.48
CPNE1-220ENST00000458038 TRRAPQ9Y4A5 3859 aa18.07■□□□□ 0.48
CPNE1-220ENST00000458038 CEACAM18A8MTB9 384 aa18.07■□□□□ 0.48
CPNE1-220ENST00000458038 SLC22A2O15244 555 aa18.07■□□□□ 0.48
CPNE1-220ENST00000458038 KHDRBS3O75525 346 aaKnown RBP18.07■□□□□ 0.48
CPNE1-220ENST00000458038 YAP1P46937 504 aaKnown RBP18.07■□□□□ 0.48
CPNE1-220ENST00000458038 ZNF181Q2M3W8 571 aa18.07■□□□□ 0.48
CPNE1-220ENST00000458038 IFI44LQ53G44 452 aa18.07■□□□□ 0.48
CPNE1-220ENST00000458038 MESTQ5EB52 335 aa18.07■□□□□ 0.48
CPNE1-220ENST00000458038 FAM122BQ7Z309 247 aa18.07■□□□□ 0.48
CPNE1-220ENST00000458038 VTCN1Q7Z7D3 282 aa18.07■□□□□ 0.48
CPNE1-220ENST00000458038 CYP4Z1Q86W10 505 aa18.07■□□□□ 0.48
CPNE1-220ENST00000458038 OR8G5Q8NG78 346 aa18.07■□□□□ 0.48
CPNE1-220ENST00000458038 NMNAT1Q9HAN9 279 aaPredicted RBP18.07■□□□□ 0.48
CPNE1-220ENST00000458038 SNX13Q9Y5W8 968 aa18.07■□□□□ 0.48
CPNE1-220ENST00000458038 J3KTA2 159 aa18.06■□□□□ 0.48
CPNE1-220ENST00000458038 CDC42EP2O14613 210 aa18.06■□□□□ 0.48
CPNE1-220ENST00000458038 NDUFB2O95178 105 aa18.06■□□□□ 0.48
CPNE1-220ENST00000458038 CTLA4P16410 223 aa18.06■□□□□ 0.48
CPNE1-220ENST00000458038 SDHAP31040 664 aa18.06■□□□□ 0.48
CPNE1-220ENST00000458038 CD80P33681 288 aa18.06■□□□□ 0.48
CPNE1-220ENST00000458038 MMP16P51512 607 aa18.06■□□□□ 0.48
CPNE1-220ENST00000458038 KCNMB1Q16558 191 aa18.06■□□□□ 0.48
CPNE1-220ENST00000458038 PGM2L1Q6PCE3 622 aa18.06■□□□□ 0.48
CPNE1-220ENST00000458038 ADCK1Q86TW2 530 aa18.06■□□□□ 0.48
CPNE1-220ENST00000458038 C1orf87Q8N0U7 546 aa18.06■□□□□ 0.48
CPNE1-220ENST00000458038 BCL6BQ8N143 479 aaPredicted RBP18.06■□□□□ 0.48
CPNE1-220ENST00000458038 APOBEC3DQ96AK3 386 aaPredicted RBP18.06■□□□□ 0.48
CPNE1-220ENST00000458038 C1orf147Q96MC9 270 aaPredicted RBP18.06■□□□□ 0.48
CPNE1-220ENST00000458038 ZNF582Q96NG8 517 aaPredicted RBP18.06■□□□□ 0.48
CPNE1-220ENST00000458038 DUX5Q96PT3 197 aa18.06■□□□□ 0.48
CPNE1-220ENST00000458038 SLITRK2Q9H156 845 aa18.06■□□□□ 0.48
CPNE1-220ENST00000458038 UNKLQ9H9P5 680 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms