RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 EDEM2Q9BV94 578 aa17.93■□□□□ 0.46
SNX27-204ENST00000458013 ROBO4Q8WZ75 1007 aa17.93■□□□□ 0.46
SNX27-204ENST00000458013 SLCO5A1Q9H2Y9 848 aa17.93■□□□□ 0.46
SNX27-204ENST00000458013 FGF22Q9HCT0 170 aa17.93■□□□□ 0.46
SNX27-204ENST00000458013 FGF17O60258 216 aa17.93■□□□□ 0.46
SNX27-204ENST00000458013 OR1M1Q8NGA1 313 aa17.93■□□□□ 0.46
SNX27-204ENST00000458013 TRDV1A0A1B0GX56 115 aa17.93■□□□□ 0.46
SNX27-204ENST00000458013 PPIAP62937 165 aaKnown RBP17.93■□□□□ 0.46
SNX27-204ENST00000458013 PHOSPHO2Q8TCD6 241 aa17.93■□□□□ 0.46
SNX27-204ENST00000458013 P2RY12Q9H244 342 aa17.93■□□□□ 0.46
SNX27-204ENST00000458013 SLC35D1Q9NTN3 355 aa17.93■□□□□ 0.46
SNX27-204ENST00000458013 SLC22A13Q9Y226 551 aa17.93■□□□□ 0.46
SNX27-204ENST00000458013 MRPS2Q9Y399 296 aaKnown RBP17.93■□□□□ 0.46
SNX27-204ENST00000458013 GPR37O15354 613 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 SMIM18P0DKX4 95 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 SLC25A6P12236 298 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 SPNP16150 400 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 DUSP1P28562 367 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 NKX2-1P43699 371 aaPredicted RBP17.92■□□□□ 0.46
SNX27-204ENST00000458013 NUDCD2Q8WVJ2 157 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 RTL8AQ9BWD3 113 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 THAP10Q9P2Z0 257 aaPredicted RBP17.92■□□□□ 0.46
SNX27-204ENST00000458013 LIPNQ5VXI9 398 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 RSPO2Q6UXX9 243 aaPredicted RBP17.92■□□□□ 0.46
SNX27-204ENST00000458013 DLEU7Q6UYE1 221 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 CADM3Q8N126 398 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 UBALD1Q8TB05 177 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 TMX2-CTNND1H3BSU7 103 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 SYT5O00445 386 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 HMGN3Q15651 99 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 H3F3CQ6NXT2 135 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 S100A7AQ86SG5 101 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 TMEM178AQ8NBL3 297 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 MYEOVQ96EZ4 313 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 CSF3RQ99062 836 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 GLRA1P23415 457 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 IL3RAP26951 378 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 RRADP55042 308 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 B3GNT9Q6UX72 402 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 SCARB1Q8WTV0 552 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 KCTD12Q96CX2 325 aaKnown RBP17.92■□□□□ 0.46
SNX27-204ENST00000458013 ATF6BQ99941 703 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 KIR3DX1Q9H7L2 352 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 PLEKHF2Q9H8W4 249 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 POM121BA6NF01 834 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 UMAD1C9J7I0 102 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 GPANK1O95872 356 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 SPINK2P20155 84 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 AGERQ15109 404 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 CREB3L2Q70SY1 520 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 LYSMD1Q96S90 227 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 ACER3Q9NUN7 267 aa17.92■□□□□ 0.46
SNX27-204ENST00000458013 OR5H14A6NHG9 310 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 AKR7A2O43488 359 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 WDR1O75083 606 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 GPX5O75715 221 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 CD63P08962 238 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 ARNTP27540 789 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 PDZK1IP1Q13113 114 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 DEFB109BQ30KR1 87 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 SKA3Q8IX90 412 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 LGI3Q8N145 548 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 KLK4Q9Y5K2 254 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 HRH1P35367 487 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 GPR12P47775 334 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 Q6ZRG5 221 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 SLC7A6Q92536 515 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 ZNF331Q9NQX6 463 aaPredicted RBP17.91■□□□□ 0.46
SNX27-204ENST00000458013 EXO1Q9UQ84 846 aaKnown RBP17.91■□□□□ 0.46
SNX27-204ENST00000458013 FLVCR1Q9Y5Y0 555 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 RAC1P63000 192 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 SLC51BQ86UW2 128 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 MAML2Q8IZL2 1156 aaPredicted RBP17.91■□□□□ 0.46
SNX27-204ENST00000458013 OR52N5Q8NH56 324 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 TMED6Q8WW62 240 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 CMBLQ96DG6 245 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 TNFRSF12AQ9NP84 129 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 EIF1BO60739 113 aaKnown RBP17.91■□□□□ 0.46
SNX27-204ENST00000458013 CYTIPO60759 359 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 TMEM52BQ4KMG9 183 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 FBXW5Q969U6 566 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 RHNO1Q9BSD3 238 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 hCG_1809904A0A1W2PP81 198 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 A0A1W2PPE2 198 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 A0A1W2PR64 198 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 CHEK1O14757 476 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 IGHEP01854 428 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 H2AFB1P0C5Y9 115 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 DUSP6Q16828 381 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 OR6M1Q8NGM8 313 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 OR5B3Q8NH48 314 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 PLEKHB1Q9UF11 243 aaPredicted RBP17.91■□□□□ 0.46
SNX27-204ENST00000458013 SLC17A4Q9Y2C5 497 aa17.91■□□□□ 0.46
SNX27-204ENST00000458013 ZNF90Q03938 601 aa17.9■□□□□ 0.46
SNX27-204ENST00000458013 C1orf87Q8N0U7 546 aa17.9■□□□□ 0.46
SNX27-204ENST00000458013 C12orf10Q9HB07 376 aa17.9■□□□□ 0.46
SNX27-204ENST00000458013 ISYNA1Q9NPH2 558 aa17.9■□□□□ 0.46
SNX27-204ENST00000458013 TNFRSF19Q9NS68 423 aa17.9■□□□□ 0.46
SNX27-204ENST00000458013 SLC22A11Q9NSA0 550 aa17.9■□□□□ 0.46
SNX27-204ENST00000458013 A0A1W2PR80 420 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms