RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 OR2G2Q8NGZ5 317 aa7.65□□□□□ -1.18
RIF1-208ENST00000457745 ZNF420Q8TAQ5 688 aaPredicted RBP7.65□□□□□ -1.18
RIF1-208ENST00000457745 RAB2BQ8WUD1 216 aa7.65□□□□□ -1.18
RIF1-208ENST00000457745 SNX33Q8WV41 574 aa7.65□□□□□ -1.18
RIF1-208ENST00000457745 RNF133Q8WVZ7 376 aa7.65□□□□□ -1.18
RIF1-208ENST00000457745 GHSRQ92847 366 aa7.65□□□□□ -1.18
RIF1-208ENST00000457745 UFD1Q92890 307 aa7.65□□□□□ -1.18
RIF1-208ENST00000457745 NKX3-1Q99801 234 aaPredicted RBP7.65□□□□□ -1.18
RIF1-208ENST00000457745 PRRG4Q9BZD6 226 aa7.65□□□□□ -1.18
RIF1-208ENST00000457745 WNT5BQ9H1J7 359 aa7.65□□□□□ -1.18
RIF1-208ENST00000457745 EXOSC4Q9NPD3 245 aaKnown RBP7.65□□□□□ -1.18
RIF1-208ENST00000457745 TIGARQ9NQ88 270 aa7.65□□□□□ -1.18
RIF1-208ENST00000457745 G6PC2Q9NQR9 355 aa7.65□□□□□ -1.18
RIF1-208ENST00000457745 CENPMQ9NSP4 180 aa7.65□□□□□ -1.18
RIF1-208ENST00000457745 CHCHD3Q9NX63 227 aaKnown RBP7.65□□□□□ -1.18
RIF1-208ENST00000457745 NDUFA13Q9P0J0 144 aa7.65□□□□□ -1.18
RIF1-208ENST00000457745 BSNQ9UPA5 3926 aa7.65□□□□□ -1.19
RIF1-208ENST00000457745 A0A0G2JK05 382 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 LOC100996750A0A140TA64 210 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 A0A1W2PR80 420 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 ACOD1A6NK06 481 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 FIGNL2A6NMB9 653 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 ZNF701M0R085 212 aaPredicted RBP7.64□□□□□ -1.19
RIF1-208ENST00000457745 PLPP2O43688 288 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 MRPL33O75394 65 aaKnown RBP7.64□□□□□ -1.19
RIF1-208ENST00000457745 CGAP01215 116 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 ZNF823P16415 610 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 ZNF32P17041 273 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 MSR1P21757 451 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 IGHV1-2P23083 117 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 GABRA5P31644 462 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 OR3A2P47893 321 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 PRKXP51817 358 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 BDH1Q02338 343 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 EGR3Q06889 387 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 FAPQ12884 760 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 INAQ16352 499 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 HIKESHIQ53FT3 197 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 NSUN5P2Q63ZY6 315 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 ZNF774Q6NX45 483 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 FAM180AQ6UWF9 173 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 RNF144BQ7Z419 303 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 CATSPERDQ86XM0 798 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 GPR137CQ8N3F9 429 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 AKR7LQ8NHP1 331 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 ABHD4Q8TB40 342 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 FAM57AQ8TBR7 257 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 CPT1CQ8TCG5 803 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 APH1AQ96BI3 265 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 SARAFQ96BY9 339 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 SMIM19Q96E16 107 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 OR14A2Q96R54 314 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 FOXB1Q99853 325 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 SLC30A2Q9BRI3 323 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 KRTAP4-6Q9BYQ5 205 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 LINC00470Q9BZP3 86 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 OPN3Q9H1Y3 402 aaPredicted RBP7.64□□□□□ -1.19
RIF1-208ENST00000457745 DCSTAMPQ9H295 470 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 BRD7Q9NPI1 651 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 B3GAT2Q9NPZ5 323 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 DDX28Q9NUL7 540 aaKnown RBP7.64□□□□□ -1.19
RIF1-208ENST00000457745 FAM206AQ9NX38 181 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 B3GNT2Q9NY97 397 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 PTTG2Q9NZH5 202 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 TINAGQ9UJW2 476 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 STUB1Q9UNE7 303 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 BOD1L1Q8NFC6 3051 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 USP24Q9UPU5 2620 aa7.64□□□□□ -1.19
RIF1-208ENST00000457745 TRBV5-5A0A0J9YX44 114 aa7.63□□□□□ -1.19
RIF1-208ENST00000457745 TRDV1A0A1B0GX56 115 aa7.63□□□□□ -1.19
RIF1-208ENST00000457745 MBD3L4A6NDZ8 208 aaPredicted RBP7.63□□□□□ -1.19
RIF1-208ENST00000457745 MBD3L3A6NE82 208 aaPredicted RBP7.63□□□□□ -1.19
RIF1-208ENST00000457745 MBD3L5A6NJ08 208 aaPredicted RBP7.63□□□□□ -1.19
RIF1-208ENST00000457745 RPL36A-HNRNPH2H7BZ11 118 aa7.63□□□□□ -1.19
RIF1-208ENST00000457745 GPR171O14626 319 aa7.63□□□□□ -1.19
RIF1-208ENST00000457745 HLA-HP01893 362 aa7.63□□□□□ -1.19
RIF1-208ENST00000457745 CRYABP02511 175 aaKnown RBP7.63□□□□□ -1.19
RIF1-208ENST00000457745 TTRP02766 147 aa7.63□□□□□ -1.19
RIF1-208ENST00000457745 KRT8P05787 483 aa7.63□□□□□ -1.19
RIF1-208ENST00000457745 GLI4P10075 376 aa7.63□□□□□ -1.19
RIF1-208ENST00000457745 ABOP16442 354 aa7.63□□□□□ -1.19
RIF1-208ENST00000457745 CRYGSP22914 178 aa7.63□□□□□ -1.19
RIF1-208ENST00000457745 TTKP33981 857 aa7.63□□□□□ -1.19
RIF1-208ENST00000457745 RPS19P39019 145 aaKnown RBP7.63□□□□□ -1.19
RIF1-208ENST00000457745 SERPINB10P48595 397 aa7.63□□□□□ -1.19
RIF1-208ENST00000457745 OR10A3P58181 314 aa7.63□□□□□ -1.19
RIF1-208ENST00000457745 ACTA2P62736 377 aa7.63□□□□□ -1.19
RIF1-208ENST00000457745 ACTG2P63267 376 aa7.63□□□□□ -1.19
RIF1-208ENST00000457745 PSG4Q00888 419 aa7.63□□□□□ -1.19
RIF1-208ENST00000457745 ALKBH1Q13686 389 aaKnown RBP7.63□□□□□ -1.19
RIF1-208ENST00000457745 RNPS1Q15287 305 aaKnown RBP7.63□□□□□ -1.19
RIF1-208ENST00000457745 KRTAP27-1Q3LI81 207 aa7.63□□□□□ -1.19
RIF1-208ENST00000457745 C1orf185Q5T7R7 199 aa7.63□□□□□ -1.19
RIF1-208ENST00000457745 RIPPLY2Q5TAB7 128 aa7.63□□□□□ -1.19
RIF1-208ENST00000457745 FAM27BQ5VT28 67 aa7.63□□□□□ -1.19
RIF1-208ENST00000457745 FDX2Q6P4F2 183 aa7.63□□□□□ -1.19
RIF1-208ENST00000457745 UNQ9370/PRO34162Q6UXP9 181 aa7.63□□□□□ -1.19
RIF1-208ENST00000457745 ZNF813Q6ZN06 617 aa7.63□□□□□ -1.19
RIF1-208ENST00000457745 CHMP1BQ7LBR1 199 aa7.63□□□□□ -1.19
RIF1-208ENST00000457745 HDDC2Q7Z4H3 204 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms